RNA–Protein interactions for RNA: ENST00000411549.5

ACAA1-203, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 1 (best)

Gene ACAA1, Length 1,944 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-203ENST00000411549 GOLGA3Q08378 1498 aa31.41■■■□□ 2.62
ACAA1-203ENST00000411549 PPARGC1BQ86YN6 1023 aaKnown RBP31.36■■■□□ 2.61
ACAA1-203ENST00000411549 KIF21BO75037 1637 aa31.36■■■□□ 2.61
ACAA1-203ENST00000411549 OSCARQ8IYS5 282 aa31.28■■■□□ 2.6
ACAA1-203ENST00000411549 CEP170Q5SW79 1584 aa31.28■■■□□ 2.6
ACAA1-203ENST00000411549 NUP160Q12769 1436 aa31.27■■■□□ 2.6
ACAA1-203ENST00000411549 UBTFP17480 764 aaKnown RBP31.24■■■□□ 2.59
ACAA1-203ENST00000411549 ZEB1P37275 1124 aaPredicted RBP31.2■■■□□ 2.58
ACAA1-203ENST00000411549 CLASP1Q7Z460 1538 aa31.18■■■□□ 2.58
ACAA1-203ENST00000411549 CTTNBP2Q8WZ74 1663 aa31.16■■■□□ 2.58
ACAA1-203ENST00000411549 KIAA0586Q9BVV6 1533 aa31.12■■■□□ 2.57
ACAA1-203ENST00000411549 IQGAP2Q13576 1575 aa31.06■■■□□ 2.56
ACAA1-203ENST00000411549 SHROOM2Q13796 1616 aa31■■■□□ 2.55
ACAA1-203ENST00000411549 CLIP1P30622 1438 aa30.96■■■□□ 2.55
ACAA1-203ENST00000411549 JPH4Q96JJ6 628 aa30.93■■■□□ 2.54
ACAA1-203ENST00000411549 UGGT2Q9NYU1 1516 aa30.89■■■□□ 2.54
ACAA1-203ENST00000411549 PRG4Q92954 1404 aaPredicted RBP30.84■■■□□ 2.53
ACAA1-203ENST00000411549 VPS8Q8N3P4 1428 aa30.83■■■□□ 2.53
ACAA1-203ENST00000411549 ARHGEF11O15085 1522 aa30.81■■■□□ 2.52
ACAA1-203ENST00000411549 DNAJC5Q9H3Z4 198 aa30.8■■■□□ 2.52
ACAA1-203ENST00000411549 ERCC6L2Q5T890 1561 aa30.79■■■□□ 2.52
ACAA1-203ENST00000411549 DISP1Q96F81 1524 aa30.77■■■□□ 2.52
ACAA1-203ENST00000411549 CARMIL2Q6F5E8 1435 aa30.77■■■□□ 2.52
ACAA1-203ENST00000411549 RIMBP3CA6NJZ7 1639 aa30.76■■■□□ 2.51
ACAA1-203ENST00000411549 RIMBP3BA6NNM3 1639 aa30.76■■■□□ 2.51
ACAA1-203ENST00000411549 KIAA0556O60303 1618 aa30.76■■■□□ 2.51
ACAA1-203ENST00000411549 RIMBP3Q9UFD9 1639 aa30.76■■■□□ 2.51
ACAA1-203ENST00000411549 SAMD9Q5K651 1589 aa30.75■■■□□ 2.51
ACAA1-203ENST00000411549 RANGAP1P46060 587 aaPredicted RBP30.74■■■□□ 2.51
ACAA1-203ENST00000411549 TTBK1Q5TCY1 1321 aaPredicted RBP30.73■■■□□ 2.51
ACAA1-203ENST00000411549 EFCAB5A4FU69 1503 aa30.72■■■□□ 2.51
ACAA1-203ENST00000411549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.65■■■□□ 2.5
ACAA1-203ENST00000411549 ARHGAP35Q9NRY4 1499 aa30.63■■■□□ 2.49
ACAA1-203ENST00000411549 P3H3Q8IVL6 736 aa30.59■■■□□ 2.49
ACAA1-203ENST00000411549 ARAP1Q96P48 1450 aa30.59■■■□□ 2.49
ACAA1-203ENST00000411549 CCER1Q8TC90 406 aaPredicted RBP30.59■■■□□ 2.49
ACAA1-203ENST00000411549 FHOD3Q2V2M9 1422 aa30.56■■■□□ 2.48
ACAA1-203ENST00000411549 PTPRGP23470 1445 aa30.54■■■□□ 2.48
ACAA1-203ENST00000411549 APLP2Q06481 763 aa30.48■■■□□ 2.47
ACAA1-203ENST00000411549 CYB5RLQ6IPT4 315 aa30.45■■■□□ 2.46
ACAA1-203ENST00000411549 FMN1Q68DA7 1419 aa30.41■■■□□ 2.46
ACAA1-203ENST00000411549 ABCA8O94911 1581 aa30.37■■■□□ 2.45
ACAA1-203ENST00000411549 PLB1Q6P1J6 1458 aa30.37■■■□□ 2.45
ACAA1-203ENST00000411549 UACAQ9BZF9 1416 aa30.37■■■□□ 2.45
ACAA1-203ENST00000411549 RAPGEF6Q8TEU7 1601 aa30.34■■■□□ 2.45
ACAA1-203ENST00000411549 ADCY10Q96PN6 1610 aa30.33■■■□□ 2.45
ACAA1-203ENST00000411549 ABCC2Q92887 1545 aa30.33■■■□□ 2.45
ACAA1-203ENST00000411549 UHRF1BP1LA0JNW5 1464 aa30.32■■■□□ 2.44
ACAA1-203ENST00000411549 PCF11O94913 1555 aaKnown RBP30.26■■■□□ 2.43
ACAA1-203ENST00000411549 HECW1Q76N89 1606 aa30.24■■■□□ 2.43
ACAA1-203ENST00000411549 CASKIN1Q8WXD9 1431 aa30.22■■■□□ 2.43
ACAA1-203ENST00000411549 HNRNPUL2Q1KMD3 747 aaKnown RBP30.21■■■□□ 2.43
ACAA1-203ENST00000411549 NUP153P49790 1475 aaKnown RBP30.21■■■□□ 2.43
ACAA1-203ENST00000411549 FYCO1Q9BQS8 1478 aa30.21■■■□□ 2.43
ACAA1-203ENST00000411549 KANK4Q5T7N3 995 aaPredicted RBP30.18■■■□□ 2.42
ACAA1-203ENST00000411549 KDM5BQ9UGL1 1544 aa30.17■■■□□ 2.42
ACAA1-203ENST00000411549 ZCCHC11Q5TAX3 1644 aaKnown RBP30.15■■■□□ 2.42
ACAA1-203ENST00000411549 ATP1B4Q9UN42 357 aaPredicted RBP30.14■■■□□ 2.41
ACAA1-203ENST00000411549 LRRIQ1Q96JM4 1722 aa30.13■■■□□ 2.41
ACAA1-203ENST00000411549 NPM1P06748 294 aaKnown RBP eCLIP30.12■■■□□ 2.41
ACAA1-203ENST00000411549 ATP10BO94823 1461 aa30.1■■■□□ 2.41
ACAA1-203ENST00000411549 EPRSP07814 1512 aaKnown RBP30.1■■■□□ 2.41
ACAA1-203ENST00000411549 RRBP1Q9P2E9 1410 aaKnown RBP30.09■■■□□ 2.41
ACAA1-203ENST00000411549 MAP3K1Q13233 1512 aa30.09■■■□□ 2.41
ACAA1-203ENST00000411549 ARID3CA6NKF2 412 aa30.08■■■□□ 2.41
ACAA1-203ENST00000411549 CCDC18Q5T9S5 1454 aa30.07■■■□□ 2.4
ACAA1-203ENST00000411549 CDK13Q14004 1512 aaKnown RBP30.06■■■□□ 2.4
ACAA1-203ENST00000411549 MAPKBP1O60336 1514 aa30.02■■■□□ 2.4
ACAA1-203ENST00000411549 TIAM1Q13009 1591 aa30■■■□□ 2.39
ACAA1-203ENST00000411549 CFAP43Q8NDM7 1665 aa29.97■■■□□ 2.39
ACAA1-203ENST00000411549 ASXL2Q76L83 1435 aa29.96■■■□□ 2.39
ACAA1-203ENST00000411549 WDR7Q9Y4E6 1490 aa29.91■■■□□ 2.38
ACAA1-203ENST00000411549 CDK11AQ9UQ88 783 aaPredicted RBP29.9■■■□□ 2.38
ACAA1-203ENST00000411549 CCNB3Q8WWL7 1395 aa29.9■■■□□ 2.38
ACAA1-203ENST00000411549 PLEKHD1A6NEE1 506 aa29.88■■■□□ 2.37
ACAA1-203ENST00000411549 LRRC9Q6ZRR7 1453 aa29.87■■■□□ 2.37
ACAA1-203ENST00000411549 MAGI3Q5TCQ9 1506 aa29.84■■■□□ 2.37
ACAA1-203ENST00000411549 CLSPNQ9HAW4 1339 aa29.82■■■□□ 2.36
ACAA1-203ENST00000411549 TROQ12816 1431 aaPredicted RBP29.82■■■□□ 2.36
ACAA1-203ENST00000411549 MTUS2Q5JR59 1369 aa29.79■■■□□ 2.36
ACAA1-203ENST00000411549 EHBP1L1Q8N3D4 1523 aa29.79■■■□□ 2.36
ACAA1-203ENST00000411549 DIP2BQ9P265 1576 aa29.79■■■□□ 2.36
ACAA1-203ENST00000411549 ABCC10Q5T3U5 1492 aa29.79■■■□□ 2.36
ACAA1-203ENST00000411549 DHX57Q6P158 1386 aaKnown RBP29.79■■■□□ 2.36
ACAA1-203ENST00000411549 KCNH8Q96L42 1107 aa29.76■■■□□ 2.35
ACAA1-203ENST00000411549 KIF14Q15058 1648 aa29.76■■■□□ 2.35
ACAA1-203ENST00000411549 KIF13AQ9H1H9 1805 aa29.75■■■□□ 2.35
ACAA1-203ENST00000411549 DIEXFQ68CQ4 756 aaKnown RBP29.75■■■□□ 2.35
ACAA1-203ENST00000411549 ZNF316A6NFI3 1004 aaPredicted RBP29.75■■■□□ 2.35
ACAA1-203ENST00000411549 GLI2P10070 1586 aa29.73■■■□□ 2.35
ACAA1-203ENST00000411549 ABCA9Q8IUA7 1624 aa29.69■■■□□ 2.34
ACAA1-203ENST00000411549 PHLDB1Q86UU1 1377 aa29.69■■■□□ 2.34
ACAA1-203ENST00000411549 SUPT6HQ7KZ85 1726 aaKnown RBP29.68■■■□□ 2.34
ACAA1-203ENST00000411549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.68■■■□□ 2.34
ACAA1-203ENST00000411549 FAM69CQ0P6D2 419 aa29.67■■■□□ 2.34
ACAA1-203ENST00000411549 TTC37Q6PGP7 1564 aa29.65■■■□□ 2.34
ACAA1-203ENST00000411549 MAP3K4Q9Y6R4 1608 aa29.64■■■□□ 2.34
ACAA1-203ENST00000411549 TRHP20396 242 aaPredicted RBP29.63■■■□□ 2.33
ACAA1-203ENST00000411549 NCOA2Q15596 1464 aa29.59■■■□□ 2.33
ACAA1-203ENST00000411549 MYO5CQ9NQX4 1742 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms