RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 JPH4Q96JJ6 628 aa39.52■■■■□ 3.92
R3HCC1-202ENST00000411463 SHROOM2Q13796 1616 aa39.51■■■■□ 3.92
R3HCC1-202ENST00000411463 KIAA0586Q9BVV6 1533 aa39.51■■■■□ 3.92
R3HCC1-202ENST00000411463 ERCC6L2Q5T890 1561 aa39.43■■■■□ 3.9
R3HCC1-202ENST00000411463 PRG4Q92954 1404 aaPredicted RBP39.42■■■■□ 3.9
R3HCC1-202ENST00000411463 CSRNP3Q8WYN3 585 aa39.41■■■■□ 3.9
R3HCC1-202ENST00000411463 EEA1Q15075 1411 aa39.41■■■■□ 3.9
R3HCC1-202ENST00000411463 PRXQ9BXM0 1461 aa39.39■■■■□ 3.9
R3HCC1-202ENST00000411463 FAM9AQ8IZU1 332 aaPredicted RBP39.3■■■■□ 3.88
R3HCC1-202ENST00000411463 IQGAP2Q13576 1575 aa39.25■■■■□ 3.87
R3HCC1-202ENST00000411463 CARMIL2Q6F5E8 1435 aa39.1■■■■□ 3.85
R3HCC1-202ENST00000411463 UGGT2Q9NYU1 1516 aa39.05■■■■□ 3.84
R3HCC1-202ENST00000411463 CTTNBP2Q8WZ74 1663 aa39.04■■■■□ 3.84
R3HCC1-202ENST00000411463 DISP1Q96F81 1524 aa39■■■■□ 3.83
R3HCC1-202ENST00000411463 TNIKQ9UKE5 1360 aa38.98■■■■□ 3.83
R3HCC1-202ENST00000411463 PTPRGP23470 1445 aa38.96■■■■□ 3.83
R3HCC1-202ENST00000411463 KIF21BO75037 1637 aa38.94■■■■□ 3.82
R3HCC1-202ENST00000411463 TTBK1Q5TCY1 1321 aaPredicted RBP38.92■■■■□ 3.82
R3HCC1-202ENST00000411463 KIAA0556O60303 1618 aa38.86■■■■□ 3.81
R3HCC1-202ENST00000411463 GOLGA3Q08378 1498 aa38.86■■■■□ 3.81
R3HCC1-202ENST00000411463 TRHP20396 242 aaPredicted RBP38.81■■■■□ 3.8
R3HCC1-202ENST00000411463 EHMT2Q96KQ7 1210 aa38.79■■■■□ 3.8
R3HCC1-202ENST00000411463 NPM1P06748 294 aaKnown RBP eCLIP38.76■■■■□ 3.8
R3HCC1-202ENST00000411463 ADCY10Q96PN6 1610 aa38.75■■■■□ 3.79
R3HCC1-202ENST00000411463 UBTFP17480 764 aaKnown RBP38.73■■■■□ 3.79
R3HCC1-202ENST00000411463 UACAQ9BZF9 1416 aa38.69■■■■□ 3.78
R3HCC1-202ENST00000411463 RANGAP1P46060 587 aaPredicted RBP38.66■■■■□ 3.78
R3HCC1-202ENST00000411463 P3H3Q8IVL6 736 aa38.66■■■■□ 3.78
R3HCC1-202ENST00000411463 UHRF1BP1LA0JNW5 1464 aa38.63■■■■□ 3.77
R3HCC1-202ENST00000411463 SAMD9Q5K651 1589 aa38.6■■■■□ 3.77
R3HCC1-202ENST00000411463 ABCC2Q92887 1545 aa38.59■■■■□ 3.77
R3HCC1-202ENST00000411463 MAPKBP1O60336 1514 aa38.53■■■■□ 3.76
R3HCC1-202ENST00000411463 PLB1Q6P1J6 1458 aa38.53■■■■□ 3.76
R3HCC1-202ENST00000411463 EFCAB5A4FU69 1503 aa38.45■■■■□ 3.75
R3HCC1-202ENST00000411463 ABCA8O94911 1581 aa38.45■■■■□ 3.75
R3HCC1-202ENST00000411463 KDM5BQ9UGL1 1544 aa38.45■■■■□ 3.75
R3HCC1-202ENST00000411463 FHOD3Q2V2M9 1422 aa38.43■■■■□ 3.74
R3HCC1-202ENST00000411463 ABCC10Q5T3U5 1492 aa38.38■■■■□ 3.74
R3HCC1-202ENST00000411463 ASXL2Q76L83 1435 aa38.35■■■■□ 3.73
R3HCC1-202ENST00000411463 FAM69CQ0P6D2 419 aa38.35■■■■□ 3.73
R3HCC1-202ENST00000411463 ZCCHC11Q5TAX3 1644 aaKnown RBP38.31■■■■□ 3.72
R3HCC1-202ENST00000411463 ARHGAP35Q9NRY4 1499 aa38.29■■■■□ 3.72
R3HCC1-202ENST00000411463 DIP2BQ9P265 1576 aa38.27■■■■□ 3.72
R3HCC1-202ENST00000411463 KIF13AQ9H1H9 1805 aa38.26■■■■□ 3.71
R3HCC1-202ENST00000411463 RAPGEF6Q8TEU7 1601 aa38.23■■■■□ 3.71
R3HCC1-202ENST00000411463 ARID3CA6NKF2 412 aa38.22■■■■□ 3.71
R3HCC1-202ENST00000411463 ATP10BO94823 1461 aa38.18■■■■□ 3.7
R3HCC1-202ENST00000411463 FMN1Q68DA7 1419 aa38.14■■■■□ 3.7
R3HCC1-202ENST00000411463 WDR7Q9Y4E6 1490 aa38.14■■■■□ 3.7
R3HCC1-202ENST00000411463 NUP153P49790 1475 aaKnown RBP38.14■■■■□ 3.7
R3HCC1-202ENST00000411463 EPRSP07814 1512 aaKnown RBP38.12■■■■□ 3.69
R3HCC1-202ENST00000411463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.09■■■■□ 3.69
R3HCC1-202ENST00000411463 HNRNPUL2Q1KMD3 747 aaKnown RBP38.09■■■■□ 3.69
R3HCC1-202ENST00000411463 CLIP1P30622 1438 aa38.08■■■■□ 3.69
R3HCC1-202ENST00000411463 GLI2P10070 1586 aa38.08■■■■□ 3.69
R3HCC1-202ENST00000411463 LOC105371045A0A1W2PR82 267 aa38.03■■■■□ 3.68
R3HCC1-202ENST00000411463 KCNH8Q96L42 1107 aa38.03■■■■□ 3.68
R3HCC1-202ENST00000411463 ATP1B4Q9UN42 357 aaPredicted RBP37.99■■■■□ 3.67
R3HCC1-202ENST00000411463 HECW1Q76N89 1606 aa37.91■■■■□ 3.66
R3HCC1-202ENST00000411463 PLEKHD1A6NEE1 506 aa37.9■■■■□ 3.66
R3HCC1-202ENST00000411463 CEP162Q5TB80 1403 aa37.9■■■■□ 3.66
R3HCC1-202ENST00000411463 TSPOAP1O95153 1857 aa37.89■■■■□ 3.66
R3HCC1-202ENST00000411463 MAP3K4Q9Y6R4 1608 aa37.88■■■■□ 3.65
R3HCC1-202ENST00000411463 CDK13Q14004 1512 aaKnown RBP37.86■■■■□ 3.65
R3HCC1-202ENST00000411463 CASKIN1Q8WXD9 1431 aa37.84■■■■□ 3.65
R3HCC1-202ENST00000411463 CD109Q6YHK3 1445 aa37.82■■■■□ 3.64
R3HCC1-202ENST00000411463 PPRC1Q5VV67 1664 aaKnown RBP37.79■■■■□ 3.64
R3HCC1-202ENST00000411463 PCF11O94913 1555 aaKnown RBP37.77■■■■□ 3.64
R3HCC1-202ENST00000411463 CFAP43Q8NDM7 1665 aa37.77■■■■□ 3.64
R3HCC1-202ENST00000411463 TEX14Q8IWB6 1497 aa37.76■■■■□ 3.64
R3HCC1-202ENST00000411463 CDK11AQ9UQ88 783 aaPredicted RBP37.76■■■■□ 3.63
R3HCC1-202ENST00000411463 FYCO1Q9BQS8 1478 aa37.73■■■■□ 3.63
R3HCC1-202ENST00000411463 MAGI3Q5TCQ9 1506 aa37.72■■■■□ 3.63
R3HCC1-202ENST00000411463 ABCA9Q8IUA7 1624 aa37.7■■■■□ 3.63
R3HCC1-202ENST00000411463 KDM6BO15054 1643 aa37.68■■■■□ 3.62
R3HCC1-202ENST00000411463 CCDC18Q5T9S5 1454 aa37.67■■■■□ 3.62
R3HCC1-202ENST00000411463 LRRIQ1Q96JM4 1722 aa37.63■■■■□ 3.61
R3HCC1-202ENST00000411463 TROQ12816 1431 aaPredicted RBP37.58■■■■□ 3.61
R3HCC1-202ENST00000411463 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.57■■■■□ 3.61
R3HCC1-202ENST00000411463 COL17A1Q9UMD9 1497 aaPredicted RBP37.54■■■■□ 3.6
R3HCC1-202ENST00000411463 TTC37Q6PGP7 1564 aa37.49■■■■□ 3.59
R3HCC1-202ENST00000411463 PHLDB1Q86UU1 1377 aa37.47■■■■□ 3.59
R3HCC1-202ENST00000411463 KIF14Q15058 1648 aa37.45■■■■□ 3.59
R3HCC1-202ENST00000411463 NEO1Q92859 1461 aa37.44■■■■□ 3.58
R3HCC1-202ENST00000411463 VPS8Q8N3P4 1428 aa37.44■■■■□ 3.58
R3HCC1-202ENST00000411463 ARAP3Q8WWN8 1544 aa37.4■■■■□ 3.58
R3HCC1-202ENST00000411463 PLCH2O75038 1416 aa37.39■■■■□ 3.58
R3HCC1-202ENST00000411463 FANCAO15360 1455 aa37.37■■■■□ 3.57
R3HCC1-202ENST00000411463 MTUS2Q5JR59 1369 aa37.32■■■■□ 3.56
R3HCC1-202ENST00000411463 AKNAQ7Z591 1439 aa37.31■■■■□ 3.56
R3HCC1-202ENST00000411463 CFAP74Q9C0B2 1584 aa37.28■■■■□ 3.56
R3HCC1-202ENST00000411463 EFCAB2Q5VUJ9 269 aa37.28■■■■□ 3.56
R3HCC1-202ENST00000411463 MYO5CQ9NQX4 1742 aa37.27■■■■□ 3.56
R3HCC1-202ENST00000411463 RAPGEF3O95398 923 aa37.26■■■■□ 3.55
R3HCC1-202ENST00000411463 ARHGAP5Q13017 1502 aa37.2■■■■□ 3.55
R3HCC1-202ENST00000411463 DENND4BO75064 1496 aaPredicted RBP37.2■■■■□ 3.54
R3HCC1-202ENST00000411463 EHBP1L1Q8N3D4 1523 aa37.19■■■■□ 3.54
R3HCC1-202ENST00000411463 TIAM1Q13009 1591 aa37.19■■■■□ 3.54
R3HCC1-202ENST00000411463 ADGRL1O94910 1474 aa37.17■■■■□ 3.54
R3HCC1-202ENST00000411463 SCAPERQ9BY12 1400 aa37.14■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms