RNA–Protein interactions for RNA: ENST00000410020.7

DYSF-208, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-208ENST00000410020 CCER2I3L3R5 266 aa17.01■□□□□ 0.31
DYSF-208ENST00000410020 TIMELESSQ9UNS1 1208 aa17.01■□□□□ 0.31
DYSF-208ENST00000410020 TSHZ2Q9NRE2 1034 aa17■□□□□ 0.31
DYSF-208ENST00000410020 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
DYSF-208ENST00000410020 SIN3AQ96ST3 1273 aa16.98■□□□□ 0.31
DYSF-208ENST00000410020 NEFMP07197 916 aa16.97■□□□□ 0.31
DYSF-208ENST00000410020 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
DYSF-208ENST00000410020 SLC24A1O60721 1099 aa16.96■□□□□ 0.31
DYSF-208ENST00000410020 CCNB3Q8WWL7 1395 aa16.95■□□□□ 0.3
DYSF-208ENST00000410020 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
DYSF-208ENST00000410020 SOGA1O94964 1423 aa16.94■□□□□ 0.3
DYSF-208ENST00000410020 VPS8Q8N3P4 1428 aa16.94■□□□□ 0.3
DYSF-208ENST00000410020 RRP7BPQ9NSQ0 103 aa16.92■□□□□ 0.3
DYSF-208ENST00000410020 WDR43Q15061 677 aaKnown RBP eCLIP16.92■□□□□ 0.3
DYSF-208ENST00000410020 ERICH6BQ5W0A0 696 aa16.9■□□□□ 0.3
DYSF-208ENST00000410020 KIF27Q86VH2 1401 aa16.89■□□□□ 0.29
DYSF-208ENST00000410020 CECR2Q9BXF3 1484 aa16.88■□□□□ 0.29
DYSF-208ENST00000410020 B4GALNT3Q6L9W6 998 aa16.87■□□□□ 0.29
DYSF-208ENST00000410020 DEKP35659 375 aaKnown RBP16.86■□□□□ 0.29
DYSF-208ENST00000410020 BECN1Q14457 450 aa16.85■□□□□ 0.29
DYSF-208ENST00000410020 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
DYSF-208ENST00000410020 KDM2AQ9Y2K7 1162 aa16.85■□□□□ 0.29
DYSF-208ENST00000410020 ARXQ96QS3 562 aa16.83■□□□□ 0.28
DYSF-208ENST00000410020 ESF1Q9H501 851 aaKnown RBP16.82■□□□□ 0.28
DYSF-208ENST00000410020 NACADO15069 1562 aa16.82■□□□□ 0.28
DYSF-208ENST00000410020 TSPY4P0CV99 314 aa16.81■□□□□ 0.28
DYSF-208ENST00000410020 TSPY10P0CW01 314 aa16.81■□□□□ 0.28
DYSF-208ENST00000410020 LAS1LQ9Y4W2 734 aaKnown RBP16.81■□□□□ 0.28
DYSF-208ENST00000410020 SETD5Q9C0A6 1442 aa16.79■□□□□ 0.28
DYSF-208ENST00000410020 CCDC88BA6NC98 1476 aa16.77■□□□□ 0.27
DYSF-208ENST00000410020 RTN4Q9NQC3 1192 aaKnown RBP16.75■□□□□ 0.27
DYSF-208ENST00000410020 KANK4Q5T7N3 995 aaPredicted RBP16.74■□□□□ 0.27
DYSF-208ENST00000410020 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
DYSF-208ENST00000410020 SENP3-EIF4A1A0A087X0R7 540 aa16.73■□□□□ 0.27
DYSF-208ENST00000410020 STAG3Q9UJ98 1225 aa16.73■□□□□ 0.27
DYSF-208ENST00000410020 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
DYSF-208ENST00000410020 CHGAP10645 457 aaKnown RBP16.72■□□□□ 0.27
DYSF-208ENST00000410020 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
DYSF-208ENST00000410020 MROH2BQ7Z745 1585 aa16.71■□□□□ 0.27
DYSF-208ENST00000410020 RAB3GAP2Q9H2M9 1393 aa16.71■□□□□ 0.27
DYSF-208ENST00000410020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.26
DYSF-208ENST00000410020 CARD11Q9BXL7 1154 aa16.7■□□□□ 0.26
DYSF-208ENST00000410020 TRIM44Q96DX7 344 aaPredicted RBP16.7■□□□□ 0.26
DYSF-208ENST00000410020 ABCC8Q09428 1581 aa16.68■□□□□ 0.26
DYSF-208ENST00000410020 PPP1R15AO75807 674 aaPredicted RBP16.68■□□□□ 0.26
DYSF-208ENST00000410020 HSPA5P11021 654 aaKnown RBP16.68■□□□□ 0.26
DYSF-208ENST00000410020 DHX57Q6P158 1386 aaKnown RBP16.66■□□□□ 0.26
DYSF-208ENST00000410020 PLPPR3Q6T4P5 718 aa16.65■□□□□ 0.26
DYSF-208ENST00000410020 GOLGA6L22H0YM25 854 aa16.63■□□□□ 0.25
DYSF-208ENST00000410020 RGS3P49796 1198 aa16.63■□□□□ 0.25
DYSF-208ENST00000410020 KNSTRNQ9Y448 316 aa16.62■□□□□ 0.25
DYSF-208ENST00000410020 CDCA8Q53HL2 280 aa16.61■□□□□ 0.25
DYSF-208ENST00000410020 IPO9Q96P70 1041 aaKnown RBP16.59■□□□□ 0.25
DYSF-208ENST00000410020 TCERG1O14776 1098 aaKnown RBP16.59■□□□□ 0.25
DYSF-208ENST00000410020 CFDP1Q9UEE9 299 aaPredicted RBP16.59■□□□□ 0.25
DYSF-208ENST00000410020 CARMIL1Q5VZK9 1371 aa16.58■□□□□ 0.25
DYSF-208ENST00000410020 MYH16Q9H6N6 1097 aa16.58■□□□□ 0.24
DYSF-208ENST00000410020 ARHGAP35Q9NRY4 1499 aa16.58■□□□□ 0.24
DYSF-208ENST00000410020 KCNH8Q96L42 1107 aa16.57■□□□□ 0.24
DYSF-208ENST00000410020 RGL3Q3MIN7 710 aa16.57■□□□□ 0.24
DYSF-208ENST00000410020 NAP1L5Q96NT1 182 aaPredicted RBP16.56■□□□□ 0.24
DYSF-208ENST00000410020 FANCIQ9NVI1 1328 aa16.56■□□□□ 0.24
DYSF-208ENST00000410020 PLEKHD1A6NEE1 506 aa16.53■□□□□ 0.24
DYSF-208ENST00000410020 NUDCQ9Y266 331 aa16.53■□□□□ 0.24
DYSF-208ENST00000410020 L1TD1Q5T7N2 865 aaKnown RBP16.52■□□□□ 0.24
DYSF-208ENST00000410020 CUX2O14529 1486 aa16.51■□□□□ 0.23
DYSF-208ENST00000410020 CFAP53Q96M91 514 aa16.51■□□□□ 0.23
DYSF-208ENST00000410020 RCAN3Q9UKA8 241 aa16.5■□□□□ 0.23
DYSF-208ENST00000410020 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
DYSF-208ENST00000410020 FTSJ3Q8IY81 847 aaKnown RBP16.48■□□□□ 0.23
DYSF-208ENST00000410020 TOP2AP11388 1531 aaKnown RBP16.47■□□□□ 0.23
DYSF-208ENST00000410020 CHMP7Q8WUX9 453 aaPredicted RBP16.47■□□□□ 0.23
DYSF-208ENST00000410020 NCLP19338 710 aaKnown RBP16.47■□□□□ 0.23
DYSF-208ENST00000410020 USP35Q9P2H5 1018 aa16.46■□□□□ 0.23
DYSF-208ENST00000410020 RALBP1Q15311 655 aa16.45■□□□□ 0.22
DYSF-208ENST00000410020 FRAT1Q92837 279 aaPredicted RBP16.45■□□□□ 0.22
DYSF-208ENST00000410020 FMN1Q68DA7 1419 aa16.45■□□□□ 0.22
DYSF-208ENST00000410020 RAPGEF2Q9Y4G8 1499 aa16.45■□□□□ 0.22
DYSF-208ENST00000410020 TMF1P82094 1093 aa16.43■□□□□ 0.22
DYSF-208ENST00000410020 KTN1Q86UP2 1357 aaKnown RBP16.43■□□□□ 0.22
DYSF-208ENST00000410020 MS4A1P11836 297 aa16.43■□□□□ 0.22
DYSF-208ENST00000410020 MPHOSPH9Q99550 1183 aa16.43■□□□□ 0.22
DYSF-208ENST00000410020 DCAF11Q8TEB1 546 aa16.43■□□□□ 0.22
DYSF-208ENST00000410020 NEUROD2Q15784 382 aa16.42■□□□□ 0.22
DYSF-208ENST00000410020 PTMAP06454 111 aaKnown RBP16.41■□□□□ 0.22
DYSF-208ENST00000410020 TNNT2P45379 298 aaPredicted RBP16.41■□□□□ 0.22
DYSF-208ENST00000410020 L3MBTL2Q969R5 705 aa16.4■□□□□ 0.22
DYSF-208ENST00000410020 WIZO95785 1651 aa16.4■□□□□ 0.22
DYSF-208ENST00000410020 PDE3BQ13370 1112 aa16.4■□□□□ 0.22
DYSF-208ENST00000410020 RUSC2Q8N2Y8 1516 aa16.39■□□□□ 0.21
DYSF-208ENST00000410020 ZBED9Q6R2W3 1325 aa16.39■□□□□ 0.21
DYSF-208ENST00000410020 HSCBQ8IWL3 235 aa16.38■□□□□ 0.21
DYSF-208ENST00000410020 FOXD1Q16676 465 aa16.38■□□□□ 0.21
DYSF-208ENST00000410020 PRKRIP1Q9H875 184 aaPredicted RBP16.38■□□□□ 0.21
DYSF-208ENST00000410020 HSP90AB1P08238 724 aaKnown RBP16.37■□□□□ 0.21
DYSF-208ENST00000410020 CHMP4BQ9H444 224 aaKnown RBP16.36■□□□□ 0.21
DYSF-208ENST00000410020 CASC1Q6TDU7 716 aa16.36■□□□□ 0.21
DYSF-208ENST00000410020 PKD2Q13563 968 aa16.36■□□□□ 0.21
DYSF-208ENST00000410020 DNTTIP2Q5QJE6 756 aaKnown RBP16.34■□□□□ 0.21
DYSF-208ENST00000410020 MAPK8IP3Q9UPT6 1336 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms