RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 BICRAQ9NZM4 1560 aa4.82□□□□□ -1.64
CUL3-204ENST00000409777 HAP1P54257 671 aaPredicted RBP4.81□□□□□ -1.64
CUL3-204ENST00000409777 NEUROD1Q13562 356 aa4.81□□□□□ -1.64
CUL3-204ENST00000409777 BIVM-ERCC5R4GMW8 1640 aa4.81□□□□□ -1.64
CUL3-204ENST00000409777 TPRNQ4KMQ1 711 aa4.81□□□□□ -1.64
CUL3-204ENST00000409777 PROM2Q8N271 834 aa4.81□□□□□ -1.64
CUL3-204ENST00000409777 TIMELESSQ9UNS1 1208 aa4.81□□□□□ -1.64
CUL3-204ENST00000409777 SYNJ1O43426 1573 aa4.81□□□□□ -1.64
CUL3-204ENST00000409777 SOGA1O94964 1423 aa4.8□□□□□ -1.64
CUL3-204ENST00000409777 BCANQ96GW7 911 aa4.8□□□□□ -1.64
CUL3-204ENST00000409777 ABCB7O75027 752 aa4.79□□□□□ -1.64
CUL3-204ENST00000409777 POLA2Q14181 598 aa4.79□□□□□ -1.64
CUL3-204ENST00000409777 CUX2O14529 1486 aa4.79□□□□□ -1.64
CUL3-204ENST00000409777 RUSC2Q8N2Y8 1516 aa4.79□□□□□ -1.64
CUL3-204ENST00000409777 CEP164Q9UPV0 1460 aa4.79□□□□□ -1.64
CUL3-204ENST00000409777 ERICH3Q5RHP9 1530 aa4.78□□□□□ -1.64
CUL3-204ENST00000409777 TOP2BQ02880 1626 aa4.78□□□□□ -1.64
CUL3-204ENST00000409777 DIEXFQ68CQ4 756 aaKnown RBP4.77□□□□□ -1.65
CUL3-204ENST00000409777 DAXXQ9UER7 740 aaPredicted RBP4.77□□□□□ -1.65
CUL3-204ENST00000409777 CHRDL2Q6WN34 429 aa4.77□□□□□ -1.65
CUL3-204ENST00000409777 VPS8Q8N3P4 1428 aa4.76□□□□□ -1.65
CUL3-204ENST00000409777 FAM9AQ8IZU1 332 aaPredicted RBP4.76□□□□□ -1.65
CUL3-204ENST00000409777 CENPBP07199 599 aaPredicted RBP4.75□□□□□ -1.65
CUL3-204ENST00000409777 CCER1Q8TC90 406 aaPredicted RBP4.75□□□□□ -1.65
CUL3-204ENST00000409777 CLSPNQ9HAW4 1339 aa4.75□□□□□ -1.65
CUL3-204ENST00000409777 CLIP1P30622 1438 aa4.75□□□□□ -1.65
CUL3-204ENST00000409777 ZNF316A6NFI3 1004 aaPredicted RBP4.75□□□□□ -1.65
CUL3-204ENST00000409777 MKRN4PQ13434 485 aaPredicted RBP4.75□□□□□ -1.65
CUL3-204ENST00000409777 PRDM2Q13029 1718 aa4.74□□□□□ -1.65
CUL3-204ENST00000409777 TULP1O00294 542 aaPredicted RBP4.74□□□□□ -1.65
CUL3-204ENST00000409777 FBXO3Q9UK99 471 aa4.74□□□□□ -1.65
CUL3-204ENST00000409777 GTF3C3Q9Y5Q9 886 aa4.74□□□□□ -1.65
CUL3-204ENST00000409777 PRXQ9BXM0 1461 aa4.73□□□□□ -1.65
CUL3-204ENST00000409777 RRBP1Q9P2E9 1410 aaKnown RBP4.72□□□□□ -1.65
CUL3-204ENST00000409777 SPDYE2BA6NHP3 402 aa4.72□□□□□ -1.65
CUL3-204ENST00000409777 SPDYE4A6NLX3 237 aa4.72□□□□□ -1.65
CUL3-204ENST00000409777 SPDYE6P0CI01 402 aa4.72□□□□□ -1.65
CUL3-204ENST00000409777 FXR2P51116 673 aaKnown RBP eCLIP4.72□□□□□ -1.652e-7■■□□□ 13.2
CUL3-204ENST00000409777 SPDYE2Q495Y8 402 aa4.72□□□□□ -1.65
CUL3-204ENST00000409777 KDM2AQ9Y2K7 1162 aa4.72□□□□□ -1.65
CUL3-204ENST00000409777 ARAP1Q96P48 1450 aa4.72□□□□□ -1.65
CUL3-204ENST00000409777 ATAD2BQ9ULI0 1458 aa4.72□□□□□ -1.65
CUL3-204ENST00000409777 MAP3K1Q13233 1512 aa4.71□□□□□ -1.65
CUL3-204ENST00000409777 RAPGEF2Q9Y4G8 1499 aa4.7□□□□□ -1.66
CUL3-204ENST00000409777 FBLN2P98095 1184 aa4.7□□□□□ -1.66
CUL3-204ENST00000409777 HMGXB3Q12766 1538 aa4.7□□□□□ -1.66
CUL3-204ENST00000409777 REM2Q8IYK8 340 aaPredicted RBP4.7□□□□□ -1.66
CUL3-204ENST00000409777 DHX57Q6P158 1386 aaKnown RBP4.69□□□□□ -1.66
CUL3-204ENST00000409777 CFAP43Q8NDM7 1665 aa4.68□□□□□ -1.66
CUL3-204ENST00000409777 CLCN6P51797 869 aa4.68□□□□□ -1.66
CUL3-204ENST00000409777 MAPKBP1O60336 1514 aa4.67□□□□□ -1.66
CUL3-204ENST00000409777 MIER1Q8N108 512 aa4.66□□□□□ -1.66
CUL3-204ENST00000409777 SP7Q8TDD2 431 aaPredicted RBP4.66□□□□□ -1.66
CUL3-204ENST00000409777 CUX1P39880 1505 aa4.66□□□□□ -1.66
CUL3-204ENST00000409777 VSIG10Q8N0Z9 540 aa4.65□□□□□ -1.67
CUL3-204ENST00000409777 TIAM1Q13009 1591 aa4.64□□□□□ -1.67
CUL3-204ENST00000409777 VASPP50552 380 aaPredicted RBP4.64□□□□□ -1.67
CUL3-204ENST00000409777 PIP4P2Q8N4L2 257 aa4.64□□□□□ -1.67
CUL3-204ENST00000409777 SSUH2Q9Y2M2 353 aa4.64□□□□□ -1.67
CUL3-204ENST00000409777 NCAPD3P42695 1498 aa4.64□□□□□ -1.67
CUL3-204ENST00000409777 ARHGAP35Q9NRY4 1499 aa4.63□□□□□ -1.67
CUL3-204ENST00000409777 ARXQ96QS3 562 aa4.63□□□□□ -1.67
CUL3-204ENST00000409777 CFTRP13569 1480 aa4.62□□□□□ -1.67
CUL3-204ENST00000409777 SPDYE1Q8NFV5 336 aaPredicted RBP4.62□□□□□ -1.67
CUL3-204ENST00000409777 PITPNM1O00562 1244 aa4.61□□□□□ -1.67
CUL3-204ENST00000409777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.61□□□□□ -1.67
CUL3-204ENST00000409777 UBTFP17480 764 aaKnown RBP4.61□□□□□ -1.67
CUL3-204ENST00000409777 SUPT16HQ9Y5B9 1047 aaKnown RBP4.6□□□□□ -1.67
CUL3-204ENST00000409777 ILDR1Q86SU0 546 aaPredicted RBP4.6□□□□□ -1.67
CUL3-204ENST00000409777 IFNLR1Q8IU57 520 aaPredicted RBP4.6□□□□□ -1.67
CUL3-204ENST00000409777 OSCARQ8IYS5 282 aa4.6□□□□□ -1.67
CUL3-204ENST00000409777 AQRO60306 1485 aaKnown RBP eCLIP4.6□□□□□ -1.67
CUL3-204ENST00000409777 KIF27Q86VH2 1401 aa4.59□□□□□ -1.67
CUL3-204ENST00000409777 CCNB3Q8WWL7 1395 aa4.59□□□□□ -1.67
CUL3-204ENST00000409777 PKD2Q13563 968 aa4.59□□□□□ -1.68
CUL3-204ENST00000409777 KDM5BQ9UGL1 1544 aa4.58□□□□□ -1.68
CUL3-204ENST00000409777 WDR97A6NE52 1622 aa4.58□□□□□ -1.68
CUL3-204ENST00000409777 LRRC9Q6ZRR7 1453 aa4.58□□□□□ -1.68
CUL3-204ENST00000409777 CTTNBP2Q8WZ74 1663 aa4.58□□□□□ -1.68
CUL3-204ENST00000409777 EFCAB5A4FU69 1503 aa4.58□□□□□ -1.68
CUL3-204ENST00000409777 KIF21AQ7Z4S6 1674 aa4.57□□□□□ -1.68
CUL3-204ENST00000409777 CC2D2AQ9P2K1 1620 aa4.57□□□□□ -1.68
CUL3-204ENST00000409777 PCF11O94913 1555 aaKnown RBP4.57□□□□□ -1.68
CUL3-204ENST00000409777 LRRIQ1Q96JM4 1722 aa4.57□□□□□ -1.68
CUL3-204ENST00000409777 KANK4Q5T7N3 995 aaPredicted RBP4.57□□□□□ -1.68
CUL3-204ENST00000409777 TSHZ2Q9NRE2 1034 aa4.57□□□□□ -1.68
CUL3-204ENST00000409777 CUL7Q14999 1698 aa4.56□□□□□ -1.68
CUL3-204ENST00000409777 C19orf67A6NJJ6 358 aa4.56□□□□□ -1.68
CUL3-204ENST00000409777 NPM1P06748 294 aaKnown RBP eCLIP4.56□□□□□ -1.68
CUL3-204ENST00000409777 STAG3Q9UJ98 1225 aa4.56□□□□□ -1.68
CUL3-204ENST00000409777 THOC2Q8NI27 1593 aaKnown RBP4.56□□□□□ -1.68
CUL3-204ENST00000409777 FYCO1Q9BQS8 1478 aa4.56□□□□□ -1.68
CUL3-204ENST00000409777 POLR1AO95602 1720 aaPredicted RBP4.56□□□□□ -1.68
CUL3-204ENST00000409777 SAMD9Q5K651 1589 aa4.55□□□□□ -1.68
CUL3-204ENST00000409777 GCC2Q8IWJ2 1684 aa4.55□□□□□ -1.68
CUL3-204ENST00000409777 SETD5Q9C0A6 1442 aa4.55□□□□□ -1.68
CUL3-204ENST00000409777 RAB3GAP2Q9H2M9 1393 aa4.55□□□□□ -1.68
CUL3-204ENST00000409777 ARHGEF11O15085 1522 aa4.55□□□□□ -1.68
CUL3-204ENST00000409777 TTBK1Q5TCY1 1321 aaPredicted RBP4.55□□□□□ -1.68
CUL3-204ENST00000409777 PAXIP1Q6ZW49 1069 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms