RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 CARMIL1Q5VZK9 1371 aa22.48■■□□□ 1.19
LIMS2-206ENST00000409754 PRXQ9BXM0 1461 aa22.45■■□□□ 1.18
LIMS2-206ENST00000409754 UBTFP17480 764 aaKnown RBP22.4■■□□□ 1.18
LIMS2-206ENST00000409754 RAPGEF2Q9Y4G8 1499 aa22.4■■□□□ 1.18
LIMS2-206ENST00000409754 CEP162Q5TB80 1403 aa22.38■■□□□ 1.17
LIMS2-206ENST00000409754 SHROOM2Q13796 1616 aa22.36■■□□□ 1.17
LIMS2-206ENST00000409754 RIMBP3CA6NJZ7 1639 aa22.33■■□□□ 1.17
LIMS2-206ENST00000409754 RIMBP3BA6NNM3 1639 aa22.33■■□□□ 1.17
LIMS2-206ENST00000409754 RIMBP3Q9UFD9 1639 aa22.33■■□□□ 1.17
LIMS2-206ENST00000409754 ARHGEF11O15085 1522 aa22.33■■□□□ 1.17
LIMS2-206ENST00000409754 ERCC6L2Q5T890 1561 aa22.31■■□□□ 1.16
LIMS2-206ENST00000409754 KIAA0586Q9BVV6 1533 aa22.28■■□□□ 1.16
LIMS2-206ENST00000409754 CTTNBP2Q8WZ74 1663 aa22.27■■□□□ 1.15
LIMS2-206ENST00000409754 IQGAP2Q13576 1575 aa22.24■■□□□ 1.15
LIMS2-206ENST00000409754 ARAP1Q96P48 1450 aa22.2■■□□□ 1.14
LIMS2-206ENST00000409754 CLIP1P30622 1438 aa22.18■■□□□ 1.14
LIMS2-206ENST00000409754 JPH4Q96JJ6 628 aa22.15■■□□□ 1.14
LIMS2-206ENST00000409754 PRG4Q92954 1404 aaPredicted RBP22.15■■□□□ 1.14
LIMS2-206ENST00000409754 UGGT2Q9NYU1 1516 aa22.13■■□□□ 1.13
LIMS2-206ENST00000409754 TRIM26Q12899 539 aaPredicted RBP22.12■■□□□ 1.13
LIMS2-206ENST00000409754 PCGF6Q9BYE7 350 aa22.12■■□□□ 1.13
LIMS2-206ENST00000409754 DISP1Q96F81 1524 aa22.11■■□□□ 1.13
LIMS2-206ENST00000409754 KIAA0556O60303 1618 aa22.06■■□□□ 1.12
LIMS2-206ENST00000409754 VPS8Q8N3P4 1428 aa22.02■■□□□ 1.11
LIMS2-206ENST00000409754 SAMD9Q5K651 1589 aa22.01■■□□□ 1.11
LIMS2-206ENST00000409754 CYB5RLQ6IPT4 315 aa21.98■■□□□ 1.11
LIMS2-206ENST00000409754 RANGAP1P46060 587 aaPredicted RBP21.95■■□□□ 1.1
LIMS2-206ENST00000409754 CARMIL2Q6F5E8 1435 aa21.94■■□□□ 1.1
LIMS2-206ENST00000409754 ARHGAP35Q9NRY4 1499 aa21.91■■□□□ 1.1
LIMS2-206ENST00000409754 ADCY10Q96PN6 1610 aa21.9■■□□□ 1.1
LIMS2-206ENST00000409754 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.09
LIMS2-206ENST00000409754 EFCAB5A4FU69 1503 aa21.86■■□□□ 1.09
LIMS2-206ENST00000409754 PTPRGP23470 1445 aa21.86■■□□□ 1.09
LIMS2-206ENST00000409754 FHOD3Q2V2M9 1422 aa21.84■■□□□ 1.09
LIMS2-206ENST00000409754 P3H3Q8IVL6 736 aa21.82■■□□□ 1.08
LIMS2-206ENST00000409754 ABCA8O94911 1581 aa21.81■■□□□ 1.08
LIMS2-206ENST00000409754 PLB1Q6P1J6 1458 aa21.81■■□□□ 1.08
LIMS2-206ENST00000409754 TTBK1Q5TCY1 1321 aaPredicted RBP21.8■■□□□ 1.08
LIMS2-206ENST00000409754 APLP2Q06481 763 aa21.78■■□□□ 1.08
LIMS2-206ENST00000409754 ABCC2Q92887 1545 aa21.78■■□□□ 1.08
LIMS2-206ENST00000409754 UHRF1BP1LA0JNW5 1464 aa21.76■■□□□ 1.07
LIMS2-206ENST00000409754 UACAQ9BZF9 1416 aa21.76■■□□□ 1.07
LIMS2-206ENST00000409754 RAPGEF6Q8TEU7 1601 aa21.7■■□□□ 1.06
LIMS2-206ENST00000409754 ZCCHC11Q5TAX3 1644 aaKnown RBP21.69■■□□□ 1.06
LIMS2-206ENST00000409754 KDM5BQ9UGL1 1544 aa21.69■■□□□ 1.06
LIMS2-206ENST00000409754 NUP153P49790 1475 aaKnown RBP21.66■■□□□ 1.06
LIMS2-206ENST00000409754 MAPKBP1O60336 1514 aa21.65■■□□□ 1.06
LIMS2-206ENST00000409754 HRCP23327 699 aa21.64■■□□□ 1.05
LIMS2-206ENST00000409754 LRRIQ1Q96JM4 1722 aa21.63■■□□□ 1.05
LIMS2-206ENST00000409754 MAP3K1Q13233 1512 aa21.62■■□□□ 1.05
LIMS2-206ENST00000409754 PCF11O94913 1555 aaKnown RBP21.62■■□□□ 1.05
LIMS2-206ENST00000409754 ATP10BO94823 1461 aa21.58■■□□□ 1.05
LIMS2-206ENST00000409754 KIF13AQ9H1H9 1805 aa21.58■■□□□ 1.05
LIMS2-206ENST00000409754 FMN1Q68DA7 1419 aa21.58■■□□□ 1.05
LIMS2-206ENST00000409754 FYCO1Q9BQS8 1478 aa21.56■■□□□ 1.04
LIMS2-206ENST00000409754 CASKIN1Q8WXD9 1431 aa21.56■■□□□ 1.04
LIMS2-206ENST00000409754 KANK4Q5T7N3 995 aaPredicted RBP21.55■■□□□ 1.04
LIMS2-206ENST00000409754 ASXL2Q76L83 1435 aa21.55■■□□□ 1.04
LIMS2-206ENST00000409754 TIAM1Q13009 1591 aa21.54■■□□□ 1.04
LIMS2-206ENST00000409754 DIP2BQ9P265 1576 aa21.54■■□□□ 1.04
LIMS2-206ENST00000409754 CDK13Q14004 1512 aaKnown RBP21.54■■□□□ 1.04
LIMS2-206ENST00000409754 HECW1Q76N89 1606 aa21.53■■□□□ 1.04
LIMS2-206ENST00000409754 ARID3CA6NKF2 412 aa21.53■■□□□ 1.04
LIMS2-206ENST00000409754 ABCC10Q5T3U5 1492 aa21.49■■□□□ 1.03
LIMS2-206ENST00000409754 EPRSP07814 1512 aaKnown RBP21.49■■□□□ 1.03
LIMS2-206ENST00000409754 CFAP43Q8NDM7 1665 aa21.49■■□□□ 1.03
LIMS2-206ENST00000409754 WDR7Q9Y4E6 1490 aa21.47■■□□□ 1.03
LIMS2-206ENST00000409754 NPM1P06748 294 aaKnown RBP eCLIP21.47■■□□□ 1.03
LIMS2-206ENST00000409754 LRRC9Q6ZRR7 1453 aa21.45■■□□□ 1.02
LIMS2-206ENST00000409754 MAGI3Q5TCQ9 1506 aa21.41■■□□□ 1.02
LIMS2-206ENST00000409754 GLI2P10070 1586 aa21.41■■□□□ 1.02
LIMS2-206ENST00000409754 RRBP1Q9P2E9 1410 aaKnown RBP21.39■■□□□ 1.01
LIMS2-206ENST00000409754 ATP1B4Q9UN42 357 aaPredicted RBP21.39■■□□□ 1.01
LIMS2-206ENST00000409754 PPRC1Q5VV67 1664 aaKnown RBP21.39■■□□□ 1.01
LIMS2-206ENST00000409754 MAP3K4Q9Y6R4 1608 aa21.37■■□□□ 1.01
LIMS2-206ENST00000409754 TRHP20396 242 aaPredicted RBP21.37■■□□□ 1.01
LIMS2-206ENST00000409754 CCDC18Q5T9S5 1454 aa21.36■■□□□ 1.01
LIMS2-206ENST00000409754 ZEB1P37275 1124 aaPredicted RBP21.34■■□□□ 1.01
LIMS2-206ENST00000409754 FAM69CQ0P6D2 419 aa21.34■■□□□ 1.01
LIMS2-206ENST00000409754 KIF14Q15058 1648 aa21.33■■□□□ 1.01
LIMS2-206ENST00000409754 ABCA9Q8IUA7 1624 aa21.33■■□□□ 1.01
LIMS2-206ENST00000409754 TSPOAP1O95153 1857 aa21.33■■□□□ 1
LIMS2-206ENST00000409754 TTC37Q6PGP7 1564 aa21.31■■□□□ 1
LIMS2-206ENST00000409754 CCNB3Q8WWL7 1395 aa21.3■■□□□ 1
LIMS2-206ENST00000409754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.29■■□□□ 1
LIMS2-206ENST00000409754 HNRNPUL2Q1KMD3 747 aaKnown RBP21.29■■□□□ 1
LIMS2-206ENST00000409754 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.29■■□□□ 1
LIMS2-206ENST00000409754 TROQ12816 1431 aaPredicted RBP21.28■■□□□ 1
LIMS2-206ENST00000409754 KCNH8Q96L42 1107 aa21.27■■□□□ 1
LIMS2-206ENST00000409754 PHLDB1Q86UU1 1377 aa21.26■□□□□ 0.99
LIMS2-206ENST00000409754 MTUS2Q5JR59 1369 aa21.24■□□□□ 0.99
LIMS2-206ENST00000409754 PLEKHD1A6NEE1 506 aa21.23■□□□□ 0.99
LIMS2-206ENST00000409754 EHBP1L1Q8N3D4 1523 aa21.23■□□□□ 0.99
LIMS2-206ENST00000409754 CD109Q6YHK3 1445 aa21.2■□□□□ 0.98
LIMS2-206ENST00000409754 CCER1Q8TC90 406 aaPredicted RBP21.19■□□□□ 0.98
LIMS2-206ENST00000409754 SUPT6HQ7KZ85 1726 aaKnown RBP21.17■□□□□ 0.98
LIMS2-206ENST00000409754 CDC42BPAQ5VT25 1732 aa21.15■□□□□ 0.98
LIMS2-206ENST00000409754 MYO5CQ9NQX4 1742 aa21.15■□□□□ 0.98
LIMS2-206ENST00000409754 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.15■□□□□ 0.98
LIMS2-206ENST00000409754 NCOA2Q15596 1464 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms