RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 CYB5RLQ6IPT4 315 aa52.55■■■■■ 6
TRAF3IP1-203ENST00000409739 KIAA0586Q9BVV6 1533 aa52.55■■■■■ 6
TRAF3IP1-203ENST00000409739 CHIC1Q5VXU3 224 aa52.53■■■■■ 6
TRAF3IP1-203ENST00000409739 JPH4Q96JJ6 628 aa52.42■■■■■ 5.98
TRAF3IP1-203ENST00000409739 PRG4Q92954 1404 aaPredicted RBP52.4■■■■■ 5.98
TRAF3IP1-203ENST00000409739 PRXQ9BXM0 1461 aa52.39■■■■■ 5.98
TRAF3IP1-203ENST00000409739 EEA1Q15075 1411 aa52.35■■■■■ 5.97
TRAF3IP1-203ENST00000409739 IQGAP2Q13576 1575 aa52.34■■■■■ 5.97
TRAF3IP1-203ENST00000409739 CTTNBP2Q8WZ74 1663 aa52.29■■■■■ 5.96
TRAF3IP1-203ENST00000409739 CSRNP3Q8WYN3 585 aa52.21■■■■■ 5.95
TRAF3IP1-203ENST00000409739 FAM9AQ8IZU1 332 aaPredicted RBP52.05■■■■■ 5.92
TRAF3IP1-203ENST00000409739 UGGT2Q9NYU1 1516 aa52.03■■■■■ 5.92
TRAF3IP1-203ENST00000409739 KIF21BO75037 1637 aa51.95■■■■■ 5.91
TRAF3IP1-203ENST00000409739 CARMIL2Q6F5E8 1435 aa51.95■■■■■ 5.91
TRAF3IP1-203ENST00000409739 DISP1Q96F81 1524 aa51.94■■■■■ 5.9
TRAF3IP1-203ENST00000409739 KIAA0556O60303 1618 aa51.86■■■■■ 5.89
TRAF3IP1-203ENST00000409739 TNIKQ9UKE5 1360 aa51.79■■■■■ 5.88
TRAF3IP1-203ENST00000409739 ADCY10Q96PN6 1610 aa51.75■■■■■ 5.88
TRAF3IP1-203ENST00000409739 PTPRGP23470 1445 aa51.73■■■■■ 5.87
TRAF3IP1-203ENST00000409739 GOLGA3Q08378 1498 aa51.67■■■■■ 5.86
TRAF3IP1-203ENST00000409739 TTBK1Q5TCY1 1321 aaPredicted RBP51.6■■■■■ 5.85
TRAF3IP1-203ENST00000409739 SAMD9Q5K651 1589 aa51.53■■■■■ 5.84
TRAF3IP1-203ENST00000409739 TRHP20396 242 aaPredicted RBP51.47■■■■■ 5.83
TRAF3IP1-203ENST00000409739 UACAQ9BZF9 1416 aa51.43■■■■■ 5.82
TRAF3IP1-203ENST00000409739 UHRF1BP1LA0JNW5 1464 aa51.42■■■■■ 5.82
TRAF3IP1-203ENST00000409739 ABCC2Q92887 1545 aa51.42■■■■■ 5.82
TRAF3IP1-203ENST00000409739 MAPKBP1O60336 1514 aa51.38■■■■■ 5.82
TRAF3IP1-203ENST00000409739 EHMT2Q96KQ7 1210 aa51.38■■■■■ 5.82
TRAF3IP1-203ENST00000409739 NPM1P06748 294 aaKnown RBP eCLIP51.34■■■■■ 5.81
TRAF3IP1-203ENST00000409739 KIF13AQ9H1H9 1805 aa51.29■■■■■ 5.8
TRAF3IP1-203ENST00000409739 UBTFP17480 764 aaKnown RBP51.28■■■■■ 5.8
TRAF3IP1-203ENST00000409739 PLB1Q6P1J6 1458 aa51.28■■■■■ 5.8
TRAF3IP1-203ENST00000409739 ABCA8O94911 1581 aa51.28■■■■■ 5.8
TRAF3IP1-203ENST00000409739 P3H3Q8IVL6 736 aa51.25■■■■■ 5.79
TRAF3IP1-203ENST00000409739 EFCAB5A4FU69 1503 aa51.24■■■■■ 5.79
TRAF3IP1-203ENST00000409739 RANGAP1P46060 587 aaPredicted RBP51.22■■■■■ 5.79
TRAF3IP1-203ENST00000409739 KDM5BQ9UGL1 1544 aa51.19■■■■■ 5.79
TRAF3IP1-203ENST00000409739 ZCCHC11Q5TAX3 1644 aaKnown RBP51.19■■■■■ 5.78
TRAF3IP1-203ENST00000409739 FHOD3Q2V2M9 1422 aa51.12■■■■■ 5.77
TRAF3IP1-203ENST00000409739 DIP2BQ9P265 1576 aa51.11■■■■■ 5.77
TRAF3IP1-203ENST00000409739 ABCC10Q5T3U5 1492 aa51.1■■■■■ 5.77
TRAF3IP1-203ENST00000409739 RAPGEF6Q8TEU7 1601 aa51.02■■■■■ 5.76
TRAF3IP1-203ENST00000409739 ASXL2Q76L83 1435 aa51.01■■■■■ 5.76
TRAF3IP1-203ENST00000409739 ARHGAP35Q9NRY4 1499 aa50.95■■■■■ 5.75
TRAF3IP1-203ENST00000409739 FAM69CQ0P6D2 419 aa50.88■■■■■ 5.74
TRAF3IP1-203ENST00000409739 WDR7Q9Y4E6 1490 aa50.78■■■■■ 5.72
TRAF3IP1-203ENST00000409739 GLI2P10070 1586 aa50.78■■■■■ 5.72
TRAF3IP1-203ENST00000409739 NUP153P49790 1475 aaKnown RBP50.78■■■■■ 5.72
TRAF3IP1-203ENST00000409739 ATP10BO94823 1461 aa50.77■■■■■ 5.72
TRAF3IP1-203ENST00000409739 TSPOAP1O95153 1857 aa50.76■■■■■ 5.72
TRAF3IP1-203ENST00000409739 EPRSP07814 1512 aaKnown RBP50.74■■■■■ 5.71
TRAF3IP1-203ENST00000409739 ARID3CA6NKF2 412 aa50.7■■■■■ 5.71
TRAF3IP1-203ENST00000409739 FMN1Q68DA7 1419 aa50.68■■■■■ 5.7
TRAF3IP1-203ENST00000409739 MAP3K4Q9Y6R4 1608 aa50.62■■■■■ 5.69
TRAF3IP1-203ENST00000409739 PPRC1Q5VV67 1664 aaKnown RBP50.59■■■■■ 5.69
TRAF3IP1-203ENST00000409739 CLIP1P30622 1438 aa50.58■■■■■ 5.69
TRAF3IP1-203ENST00000409739 HECW1Q76N89 1606 aa50.56■■■■■ 5.68
TRAF3IP1-203ENST00000409739 CFAP43Q8NDM7 1665 aa50.47■■■■■ 5.67
TRAF3IP1-203ENST00000409739 CDK13Q14004 1512 aaKnown RBP50.45■■■■■ 5.67
TRAF3IP1-203ENST00000409739 LRRIQ1Q96JM4 1722 aa50.44■■■■■ 5.66
TRAF3IP1-203ENST00000409739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP50.43■■■■■ 5.66
TRAF3IP1-203ENST00000409739 HNRNPUL2Q1KMD3 747 aaKnown RBP50.43■■■■■ 5.66
TRAF3IP1-203ENST00000409739 PCF11O94913 1555 aaKnown RBP50.43■■■■■ 5.66
TRAF3IP1-203ENST00000409739 KCNH8Q96L42 1107 aa50.41■■■■■ 5.66
TRAF3IP1-203ENST00000409739 CEP162Q5TB80 1403 aa50.37■■■■■ 5.65
TRAF3IP1-203ENST00000409739 LOC105371045A0A1W2PR82 267 aa50.36■■■■■ 5.65
TRAF3IP1-203ENST00000409739 ABCA9Q8IUA7 1624 aa50.33■■■■■ 5.65
TRAF3IP1-203ENST00000409739 CASKIN1Q8WXD9 1431 aa50.3■■■■■ 5.64
TRAF3IP1-203ENST00000409739 ATP1B4Q9UN42 357 aaPredicted RBP50.29■■■■■ 5.64
TRAF3IP1-203ENST00000409739 KDM6BO15054 1643 aa50.28■■■■■ 5.64
TRAF3IP1-203ENST00000409739 CD109Q6YHK3 1445 aa50.26■■■■■ 5.64
TRAF3IP1-203ENST00000409739 TEX14Q8IWB6 1497 aa50.26■■■■■ 5.64
TRAF3IP1-203ENST00000409739 FYCO1Q9BQS8 1478 aa50.23■■■■■ 5.63
TRAF3IP1-203ENST00000409739 MAGI3Q5TCQ9 1506 aa50.21■■■■■ 5.63
TRAF3IP1-203ENST00000409739 PLEKHD1A6NEE1 506 aa50.21■■■■■ 5.63
TRAF3IP1-203ENST00000409739 CCDC18Q5T9S5 1454 aa50.14■■■■■ 5.62
TRAF3IP1-203ENST00000409739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP50.07■■■■■ 5.61
TRAF3IP1-203ENST00000409739 TTC37Q6PGP7 1564 aa50.06■■■■■ 5.6
TRAF3IP1-203ENST00000409739 CDK11AQ9UQ88 783 aaPredicted RBP49.99■■■■■ 5.59
TRAF3IP1-203ENST00000409739 KIF14Q15058 1648 aa49.99■■■■■ 5.59
TRAF3IP1-203ENST00000409739 TROQ12816 1431 aaPredicted RBP49.97■■■■■ 5.59
TRAF3IP1-203ENST00000409739 COL17A1Q9UMD9 1497 aaPredicted RBP49.96■■■■■ 5.59
TRAF3IP1-203ENST00000409739 MYO5CQ9NQX4 1742 aa49.85■■■■■ 5.57
TRAF3IP1-203ENST00000409739 NEO1Q92859 1461 aa49.82■■■■■ 5.57
TRAF3IP1-203ENST00000409739 CFAP74Q9C0B2 1584 aa49.8■■■■■ 5.56
TRAF3IP1-203ENST00000409739 ARAP3Q8WWN8 1544 aa49.79■■■■■ 5.56
TRAF3IP1-203ENST00000409739 VPS8Q8N3P4 1428 aa49.77■■■■■ 5.56
TRAF3IP1-203ENST00000409739 PHLDB1Q86UU1 1377 aa49.75■■■■■ 5.55
TRAF3IP1-203ENST00000409739 FANCAO15360 1455 aa49.72■■■■■ 5.55
TRAF3IP1-203ENST00000409739 PLCH2O75038 1416 aa49.69■■■■■ 5.55
TRAF3IP1-203ENST00000409739 CDC42BPBQ9Y5S2 1711 aa49.63■■■■■ 5.53
TRAF3IP1-203ENST00000409739 PREX2Q70Z35 1606 aa49.6■■■■■ 5.53
TRAF3IP1-203ENST00000409739 CDC42BPAQ5VT25 1732 aa49.6■■■■■ 5.53
TRAF3IP1-203ENST00000409739 AKNAQ7Z591 1439 aa49.6■■■■■ 5.53
TRAF3IP1-203ENST00000409739 FRMPD1Q5SYB0 1578 aa49.58■■■■■ 5.53
TRAF3IP1-203ENST00000409739 EHBP1L1Q8N3D4 1523 aa49.57■■■■■ 5.53
TRAF3IP1-203ENST00000409739 TIAM1Q13009 1591 aa49.57■■■■■ 5.53
TRAF3IP1-203ENST00000409739 RICTORQ6R327 1708 aa49.55■■■■■ 5.52
TRAF3IP1-203ENST00000409739 MTUS2Q5JR59 1369 aa49.53■■■■■ 5.52
TRAF3IP1-203ENST00000409739 ARHGAP5Q13017 1502 aa49.53■■■■■ 5.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms