RNA–Protein interactions for RNA: ENST00000409551.7

PAX3-207, Transcript of paired box 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-207ENST00000409551 ADAMTS12P58397 1594 aa26.17■■□□□ 1.78
PAX3-207ENST00000409551 TRIM26Q12899 539 aaPredicted RBP26.17■■□□□ 1.78
PAX3-207ENST00000409551 FHAD1B1AJZ9 1412 aa26.16■■□□□ 1.78
PAX3-207ENST00000409551 PCGF6Q9BYE7 350 aa26.13■■□□□ 1.77
PAX3-207ENST00000409551 GRIN2AQ12879 1464 aa26.12■■□□□ 1.77
PAX3-207ENST00000409551 VPS8Q8N3P4 1428 aa26.09■■□□□ 1.77
PAX3-207ENST00000409551 CLASP1Q7Z460 1538 aa26.02■■□□□ 1.76
PAX3-207ENST00000409551 ARAP1Q96P48 1450 aa26.01■■□□□ 1.75
PAX3-207ENST00000409551 CTTNBP2Q8WZ74 1663 aa26■■□□□ 1.75
PAX3-207ENST00000409551 ARHGEF11O15085 1522 aa26■■□□□ 1.75
PAX3-207ENST00000409551 RIMBP3CA6NJZ7 1639 aa25.99■■□□□ 1.75
PAX3-207ENST00000409551 RIMBP3BA6NNM3 1639 aa25.99■■□□□ 1.75
PAX3-207ENST00000409551 RIMBP3Q9UFD9 1639 aa25.99■■□□□ 1.75
PAX3-207ENST00000409551 CEP170Q5SW79 1584 aa25.99■■□□□ 1.75
PAX3-207ENST00000409551 ARHGAP35Q9NRY4 1499 aa25.97■■□□□ 1.75
PAX3-207ENST00000409551 NUP160Q12769 1436 aa25.96■■□□□ 1.75
PAX3-207ENST00000409551 RANGAP1P46060 587 aaPredicted RBP25.95■■□□□ 1.74
PAX3-207ENST00000409551 CYB5RLQ6IPT4 315 aa25.89■■□□□ 1.73
PAX3-207ENST00000409551 PPARGC1BQ86YN6 1023 aaKnown RBP25.87■■□□□ 1.73
PAX3-207ENST00000409551 EFCAB5A4FU69 1503 aa25.85■■□□□ 1.73
PAX3-207ENST00000409551 JPH4Q96JJ6 628 aa25.81■■□□□ 1.72
PAX3-207ENST00000409551 APLP2Q06481 763 aa25.77■■□□□ 1.72
PAX3-207ENST00000409551 KIAA0586Q9BVV6 1533 aa25.76■■□□□ 1.71
PAX3-207ENST00000409551 ERCC6L2Q5T890 1561 aa25.75■■□□□ 1.71
PAX3-207ENST00000409551 PRG4Q92954 1404 aaPredicted RBP25.73■■□□□ 1.71
PAX3-207ENST00000409551 SHROOM2Q13796 1616 aa25.73■■□□□ 1.71
PAX3-207ENST00000409551 SAMD9Q5K651 1589 aa25.73■■□□□ 1.71
PAX3-207ENST00000409551 IQGAP2Q13576 1575 aa25.66■■□□□ 1.7
PAX3-207ENST00000409551 MAP3K1Q13233 1512 aa25.66■■□□□ 1.7
PAX3-207ENST00000409551 FHOD3Q2V2M9 1422 aa25.63■■□□□ 1.69
PAX3-207ENST00000409551 TTBK1Q5TCY1 1321 aaPredicted RBP25.62■■□□□ 1.69
PAX3-207ENST00000409551 PCF11O94913 1555 aaKnown RBP25.6■■□□□ 1.69
PAX3-207ENST00000409551 FMN1Q68DA7 1419 aa25.59■■□□□ 1.69
PAX3-207ENST00000409551 HRCP23327 699 aa25.58■■□□□ 1.69
PAX3-207ENST00000409551 TIAM1Q13009 1591 aa25.57■■□□□ 1.68
PAX3-207ENST00000409551 FYCO1Q9BQS8 1478 aa25.57■■□□□ 1.68
PAX3-207ENST00000409551 P3H3Q8IVL6 736 aa25.56■■□□□ 1.68
PAX3-207ENST00000409551 CASKIN1Q8WXD9 1431 aa25.55■■□□□ 1.68
PAX3-207ENST00000409551 UGGT2Q9NYU1 1516 aa25.55■■□□□ 1.68
PAX3-207ENST00000409551 CFAP43Q8NDM7 1665 aa25.55■■□□□ 1.68
PAX3-207ENST00000409551 CARMIL2Q6F5E8 1435 aa25.52■■□□□ 1.68
PAX3-207ENST00000409551 KANK4Q5T7N3 995 aaPredicted RBP25.49■■□□□ 1.67
PAX3-207ENST00000409551 DISP1Q96F81 1524 aa25.45■■□□□ 1.66
PAX3-207ENST00000409551 PTPRGP23470 1445 aa25.43■■□□□ 1.66
PAX3-207ENST00000409551 LRRC9Q6ZRR7 1453 aa25.43■■□□□ 1.66
PAX3-207ENST00000409551 KIAA0556O60303 1618 aa25.41■■□□□ 1.66
PAX3-207ENST00000409551 TRHP20396 242 aaPredicted RBP25.39■■□□□ 1.65
PAX3-207ENST00000409551 LRRIQ1Q96JM4 1722 aa25.35■■□□□ 1.65
PAX3-207ENST00000409551 RRBP1Q9P2E9 1410 aaKnown RBP25.34■■□□□ 1.65
PAX3-207ENST00000409551 HECW1Q76N89 1606 aa25.33■■□□□ 1.65
PAX3-207ENST00000409551 NPM1P06748 294 aaKnown RBP eCLIP25.32■■□□□ 1.64
PAX3-207ENST00000409551 ATP1B4Q9UN42 357 aaPredicted RBP25.31■■□□□ 1.64
PAX3-207ENST00000409551 CCDC18Q5T9S5 1454 aa25.29■■□□□ 1.64
PAX3-207ENST00000409551 ADCY10Q96PN6 1610 aa25.29■■□□□ 1.64
PAX3-207ENST00000409551 ZEB1P37275 1124 aaPredicted RBP25.25■■□□□ 1.63
PAX3-207ENST00000409551 UACAQ9BZF9 1416 aa25.23■■□□□ 1.63
PAX3-207ENST00000409551 CCNB3Q8WWL7 1395 aa25.22■■□□□ 1.63
PAX3-207ENST00000409551 EHBP1L1Q8N3D4 1523 aa25.2■■□□□ 1.62
PAX3-207ENST00000409551 EPRSP07814 1512 aaKnown RBP25.19■■□□□ 1.62
PAX3-207ENST00000409551 PLB1Q6P1J6 1458 aa25.18■■□□□ 1.62
PAX3-207ENST00000409551 RAPGEF6Q8TEU7 1601 aa25.18■■□□□ 1.62
PAX3-207ENST00000409551 PHLDB1Q86UU1 1377 aa25.17■■□□□ 1.62
PAX3-207ENST00000409551 MTUS2Q5JR59 1369 aa25.16■■□□□ 1.62
PAX3-207ENST00000409551 HNRNPUL2Q1KMD3 747 aaKnown RBP25.16■■□□□ 1.62
PAX3-207ENST00000409551 ABCC2Q92887 1545 aa25.15■■□□□ 1.62
PAX3-207ENST00000409551 SUPT6HQ7KZ85 1726 aaKnown RBP25.14■■□□□ 1.62
PAX3-207ENST00000409551 UHRF1BP1LA0JNW5 1464 aa25.13■■□□□ 1.61
PAX3-207ENST00000409551 ARID3CA6NKF2 412 aa25.12■■□□□ 1.61
PAX3-207ENST00000409551 MAGI3Q5TCQ9 1506 aa25.09■■□□□ 1.61
PAX3-207ENST00000409551 NUP153P49790 1475 aaKnown RBP25.09■■□□□ 1.61
PAX3-207ENST00000409551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.09■■□□□ 1.61
PAX3-207ENST00000409551 CDK13Q14004 1512 aaKnown RBP25.08■■□□□ 1.61
PAX3-207ENST00000409551 ABCA8O94911 1581 aa25.07■■□□□ 1.6
PAX3-207ENST00000409551 MAPKBP1O60336 1514 aa25.07■■□□□ 1.6
PAX3-207ENST00000409551 NCOA2Q15596 1464 aa25.07■■□□□ 1.6
PAX3-207ENST00000409551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.06■■□□□ 1.6
PAX3-207ENST00000409551 CCER1Q8TC90 406 aaPredicted RBP25.06■■□□□ 1.6
PAX3-207ENST00000409551 FAM69CQ0P6D2 419 aa25.05■■□□□ 1.6
PAX3-207ENST00000409551 KDM5BQ9UGL1 1544 aa25.04■■□□□ 1.6
PAX3-207ENST00000409551 ZCCHC11Q5TAX3 1644 aaKnown RBP25.03■■□□□ 1.6
PAX3-207ENST00000409551 ASXL2Q76L83 1435 aa25.03■■□□□ 1.6
PAX3-207ENST00000409551 FGD6Q6ZV73 1430 aa25.01■■□□□ 1.59
PAX3-207ENST00000409551 ABCC10Q5T3U5 1492 aa25■■□□□ 1.59
PAX3-207ENST00000409551 MYOM3Q5VTT5 1437 aa24.99■■□□□ 1.59
PAX3-207ENST00000409551 KIF13AQ9H1H9 1805 aa24.98■■□□□ 1.59
PAX3-207ENST00000409551 DIP2BQ9P265 1576 aa24.94■■□□□ 1.58
PAX3-207ENST00000409551 CDK11AQ9UQ88 783 aaPredicted RBP24.93■■□□□ 1.58
PAX3-207ENST00000409551 KCNH8Q96L42 1107 aa24.93■■□□□ 1.58
PAX3-207ENST00000409551 ATP10BO94823 1461 aa24.92■■□□□ 1.58
PAX3-207ENST00000409551 FAM50AQ14320 339 aaKnown RBP24.91■■□□□ 1.58
PAX3-207ENST00000409551 PTPN23Q9H3S7 1636 aa24.89■■□□□ 1.57
PAX3-207ENST00000409551 WDR7Q9Y4E6 1490 aa24.88■■□□□ 1.57
PAX3-207ENST00000409551 TROQ12816 1431 aaPredicted RBP24.88■■□□□ 1.57
PAX3-207ENST00000409551 TCOF1Q13428 1488 aaKnown RBP24.87■■□□□ 1.57
PAX3-207ENST00000409551 MIA2Q96PC5 1412 aa24.87■■□□□ 1.57
PAX3-207ENST00000409551 ITGAEP38570 1179 aa24.85■■□□□ 1.57
PAX3-207ENST00000409551 TSPOAP1O95153 1857 aa24.85■■□□□ 1.57
PAX3-207ENST00000409551 SETD5Q9C0A6 1442 aa24.8■■□□□ 1.56
PAX3-207ENST00000409551 PLEKHD1A6NEE1 506 aa24.78■■□□□ 1.56
PAX3-207ENST00000409551 GLI2P10070 1586 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms