RNA–Protein interactions for RNA: ENST00000409295.5

COPS7B-205, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-205ENST00000409295 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
COPS7B-205ENST00000409295 KIAA0586Q9BVV6 1533 aa24■■□□□ 1.43
COPS7B-205ENST00000409295 CSRNP3Q8WYN3 585 aa23.99■■□□□ 1.43
COPS7B-205ENST00000409295 PRG4Q92954 1404 aaPredicted RBP23.96■■□□□ 1.43
COPS7B-205ENST00000409295 EEA1Q15075 1411 aa23.93■■□□□ 1.42
COPS7B-205ENST00000409295 FAM9AQ8IZU1 332 aaPredicted RBP23.92■■□□□ 1.42
COPS7B-205ENST00000409295 SHROOM2Q13796 1616 aa23.9■■□□□ 1.42
COPS7B-205ENST00000409295 PRXQ9BXM0 1461 aa23.86■■□□□ 1.41
COPS7B-205ENST00000409295 ERCC6L2Q5T890 1561 aa23.86■■□□□ 1.41
COPS7B-205ENST00000409295 CARMIL2Q6F5E8 1435 aa23.82■■□□□ 1.4
COPS7B-205ENST00000409295 IQGAP2Q13576 1575 aa23.78■■□□□ 1.4
COPS7B-205ENST00000409295 TRHP20396 242 aaPredicted RBP23.75■■□□□ 1.39
COPS7B-205ENST00000409295 TTBK1Q5TCY1 1321 aaPredicted RBP23.75■■□□□ 1.39
COPS7B-205ENST00000409295 NPM1P06748 294 aaKnown RBP eCLIP23.73■■□□□ 1.39
COPS7B-205ENST00000409295 PTPRGP23470 1445 aa23.72■■□□□ 1.39
COPS7B-205ENST00000409295 TNIKQ9UKE5 1360 aa23.71■■□□□ 1.39
COPS7B-205ENST00000409295 UGGT2Q9NYU1 1516 aa23.66■■□□□ 1.38
COPS7B-205ENST00000409295 GOLGA3Q08378 1498 aa23.63■■□□□ 1.37
COPS7B-205ENST00000409295 UBTFP17480 764 aaKnown RBP23.62■■□□□ 1.37
COPS7B-205ENST00000409295 DISP1Q96F81 1524 aa23.62■■□□□ 1.37
COPS7B-205ENST00000409295 EHMT2Q96KQ7 1210 aa23.61■■□□□ 1.37
COPS7B-205ENST00000409295 CTTNBP2Q8WZ74 1663 aa23.6■■□□□ 1.37
COPS7B-205ENST00000409295 RANGAP1P46060 587 aaPredicted RBP23.57■■□□□ 1.36
COPS7B-205ENST00000409295 P3H3Q8IVL6 736 aa23.55■■□□□ 1.36
COPS7B-205ENST00000409295 KIF21BO75037 1637 aa23.55■■□□□ 1.36
COPS7B-205ENST00000409295 KIAA0556O60303 1618 aa23.51■■□□□ 1.35
COPS7B-205ENST00000409295 UACAQ9BZF9 1416 aa23.51■■□□□ 1.35
COPS7B-205ENST00000409295 ADCY10Q96PN6 1610 aa23.46■■□□□ 1.35
COPS7B-205ENST00000409295 UHRF1BP1LA0JNW5 1464 aa23.44■■□□□ 1.34
COPS7B-205ENST00000409295 ABCC2Q92887 1545 aa23.42■■□□□ 1.34
COPS7B-205ENST00000409295 FAM69CQ0P6D2 419 aa23.4■■□□□ 1.34
COPS7B-205ENST00000409295 PLB1Q6P1J6 1458 aa23.36■■□□□ 1.33
COPS7B-205ENST00000409295 MAPKBP1O60336 1514 aa23.36■■□□□ 1.33
COPS7B-205ENST00000409295 SAMD9Q5K651 1589 aa23.33■■□□□ 1.33
COPS7B-205ENST00000409295 KDM5BQ9UGL1 1544 aa23.32■■□□□ 1.32
COPS7B-205ENST00000409295 ABCC10Q5T3U5 1492 aa23.31■■□□□ 1.32
COPS7B-205ENST00000409295 EFCAB5A4FU69 1503 aa23.3■■□□□ 1.32
COPS7B-205ENST00000409295 FHOD3Q2V2M9 1422 aa23.3■■□□□ 1.32
COPS7B-205ENST00000409295 ASXL2Q76L83 1435 aa23.3■■□□□ 1.32
COPS7B-205ENST00000409295 ABCA8O94911 1581 aa23.28■■□□□ 1.32
COPS7B-205ENST00000409295 ARID3CA6NKF2 412 aa23.27■■□□□ 1.32
COPS7B-205ENST00000409295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.27■■□□□ 1.32
COPS7B-205ENST00000409295 HNRNPUL2Q1KMD3 747 aaKnown RBP23.27■■□□□ 1.32
COPS7B-205ENST00000409295 KCNH8Q96L42 1107 aa23.22■■□□□ 1.31
COPS7B-205ENST00000409295 ATP1B4Q9UN42 357 aaPredicted RBP23.21■■□□□ 1.31
COPS7B-205ENST00000409295 ZCCHC11Q5TAX3 1644 aaKnown RBP23.2■■□□□ 1.3
COPS7B-205ENST00000409295 DIP2BQ9P265 1576 aa23.18■■□□□ 1.3
COPS7B-205ENST00000409295 ATP10BO94823 1461 aa23.17■■□□□ 1.3
COPS7B-205ENST00000409295 ARHGAP35Q9NRY4 1499 aa23.17■■□□□ 1.3
COPS7B-205ENST00000409295 FMN1Q68DA7 1419 aa23.17■■□□□ 1.3
COPS7B-205ENST00000409295 RAPGEF6Q8TEU7 1601 aa23.16■■□□□ 1.3
COPS7B-205ENST00000409295 WDR7Q9Y4E6 1490 aa23.16■■□□□ 1.3
COPS7B-205ENST00000409295 KIF13AQ9H1H9 1805 aa23.15■■□□□ 1.3
COPS7B-205ENST00000409295 PLEKHD1A6NEE1 506 aa23.14■■□□□ 1.29
COPS7B-205ENST00000409295 EPRSP07814 1512 aaKnown RBP23.13■■□□□ 1.29
COPS7B-205ENST00000409295 CLIP1P30622 1438 aa23.11■■□□□ 1.29
COPS7B-205ENST00000409295 LOC105371045A0A1W2PR82 267 aa23.11■■□□□ 1.29
COPS7B-205ENST00000409295 GLI2P10070 1586 aa23.1■■□□□ 1.29
COPS7B-205ENST00000409295 NUP153P49790 1475 aaKnown RBP23.1■■□□□ 1.29
COPS7B-205ENST00000409295 CDK11AQ9UQ88 783 aaPredicted RBP23.07■■□□□ 1.28
COPS7B-205ENST00000409295 CD109Q6YHK3 1445 aa23.02■■□□□ 1.28
COPS7B-205ENST00000409295 TSPOAP1O95153 1857 aa23■■□□□ 1.27
COPS7B-205ENST00000409295 TEX14Q8IWB6 1497 aa22.98■■□□□ 1.27
COPS7B-205ENST00000409295 CEP162Q5TB80 1403 aa22.97■■□□□ 1.27
COPS7B-205ENST00000409295 HECW1Q76N89 1606 aa22.96■■□□□ 1.27
COPS7B-205ENST00000409295 CASKIN1Q8WXD9 1431 aa22.95■■□□□ 1.26
COPS7B-205ENST00000409295 MAP3K4Q9Y6R4 1608 aa22.93■■□□□ 1.26
COPS7B-205ENST00000409295 CDK13Q14004 1512 aaKnown RBP22.92■■□□□ 1.26
COPS7B-205ENST00000409295 MAGI3Q5TCQ9 1506 aa22.9■■□□□ 1.26
COPS7B-205ENST00000409295 CFAP43Q8NDM7 1665 aa22.89■■□□□ 1.25
COPS7B-205ENST00000409295 KDM6BO15054 1643 aa22.87■■□□□ 1.25
COPS7B-205ENST00000409295 CCDC18Q5T9S5 1454 aa22.86■■□□□ 1.25
COPS7B-205ENST00000409295 FYCO1Q9BQS8 1478 aa22.86■■□□□ 1.25
COPS7B-205ENST00000409295 PHLDB1Q86UU1 1377 aa22.85■■□□□ 1.25
COPS7B-205ENST00000409295 PPRC1Q5VV67 1664 aaKnown RBP22.84■■□□□ 1.25
COPS7B-205ENST00000409295 ABCA9Q8IUA7 1624 aa22.84■■□□□ 1.25
COPS7B-205ENST00000409295 PCF11O94913 1555 aaKnown RBP22.82■■□□□ 1.24
COPS7B-205ENST00000409295 TROQ12816 1431 aaPredicted RBP22.82■■□□□ 1.24
COPS7B-205ENST00000409295 COL17A1Q9UMD9 1497 aaPredicted RBP22.76■■□□□ 1.23
COPS7B-205ENST00000409295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.76■■□□□ 1.23
COPS7B-205ENST00000409295 NEO1Q92859 1461 aa22.75■■□□□ 1.23
COPS7B-205ENST00000409295 EFCAB2Q5VUJ9 269 aa22.75■■□□□ 1.23
COPS7B-205ENST00000409295 PLCH2O75038 1416 aa22.72■■□□□ 1.23
COPS7B-205ENST00000409295 MTUS2Q5JR59 1369 aa22.71■■□□□ 1.23
COPS7B-205ENST00000409295 ARAP3Q8WWN8 1544 aa22.71■■□□□ 1.23
COPS7B-205ENST00000409295 VPS8Q8N3P4 1428 aa22.7■■□□□ 1.22
COPS7B-205ENST00000409295 FANCAO15360 1455 aa22.7■■□□□ 1.22
COPS7B-205ENST00000409295 KIF14Q15058 1648 aa22.7■■□□□ 1.22
COPS7B-205ENST00000409295 AKNAQ7Z591 1439 aa22.69■■□□□ 1.22
COPS7B-205ENST00000409295 LRRIQ1Q96JM4 1722 aa22.68■■□□□ 1.22
COPS7B-205ENST00000409295 RAPGEF3O95398 923 aa22.68■■□□□ 1.22
COPS7B-205ENST00000409295 TTC37Q6PGP7 1564 aa22.67■■□□□ 1.22
COPS7B-205ENST00000409295 APLP2Q06481 763 aa22.67■■□□□ 1.22
COPS7B-205ENST00000409295 CFAP74Q9C0B2 1584 aa22.63■■□□□ 1.21
COPS7B-205ENST00000409295 DENND4BO75064 1496 aaPredicted RBP22.62■■□□□ 1.21
COPS7B-205ENST00000409295 AEBP2Q6ZN18 517 aaPredicted RBP22.62■■□□□ 1.21
COPS7B-205ENST00000409295 ARHGAP5Q13017 1502 aa22.6■■□□□ 1.21
COPS7B-205ENST00000409295 SCAPERQ9BY12 1400 aa22.59■■□□□ 1.21
COPS7B-205ENST00000409295 CCNB3Q8WWL7 1395 aa22.59■■□□□ 1.21
COPS7B-205ENST00000409295 ADGRL1O94910 1474 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms