RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 IQGAP2Q13576 1575 aa21.34■■□□□ 1.01
LIMS2-203ENST00000409254 SHROOM2Q13796 1616 aa21.31■■□□□ 1
LIMS2-203ENST00000409254 FBLN2P98095 1184 aa21.27■■□□□ 1
LIMS2-203ENST00000409254 UGGT2Q9NYU1 1516 aa21.24■□□□□ 0.99
LIMS2-203ENST00000409254 OSCARQ8IYS5 282 aa21.24■□□□□ 0.99
LIMS2-203ENST00000409254 TNIKQ9UKE5 1360 aa21.23■□□□□ 0.99
LIMS2-203ENST00000409254 EFCAB5A4FU69 1503 aa21.2■□□□□ 0.98
LIMS2-203ENST00000409254 SAMD9Q5K651 1589 aa21.18■□□□□ 0.98
LIMS2-203ENST00000409254 UBTFP17480 764 aaKnown RBP21.13■□□□□ 0.97
LIMS2-203ENST00000409254 KIAA0556O60303 1618 aa21.11■□□□□ 0.97
LIMS2-203ENST00000409254 CARMIL2Q6F5E8 1435 aa21.09■□□□□ 0.97
LIMS2-203ENST00000409254 DISP1Q96F81 1524 aa21.07■□□□□ 0.96
LIMS2-203ENST00000409254 JPH4Q96JJ6 628 aa21.06■□□□□ 0.96
LIMS2-203ENST00000409254 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
LIMS2-203ENST00000409254 PRG4Q92954 1404 aaPredicted RBP21.03■□□□□ 0.96
LIMS2-203ENST00000409254 ARHGEF11O15085 1522 aa21.01■□□□□ 0.95
LIMS2-203ENST00000409254 CLIP1P30622 1438 aa21.01■□□□□ 0.95
LIMS2-203ENST00000409254 ARHGAP35Q9NRY4 1499 aa21■□□□□ 0.95
LIMS2-203ENST00000409254 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
LIMS2-203ENST00000409254 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
LIMS2-203ENST00000409254 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
LIMS2-203ENST00000409254 LOC105371045A0A1W2PR82 267 aa20.98■□□□□ 0.95
LIMS2-203ENST00000409254 ERCC6L2Q5T890 1561 aa20.95■□□□□ 0.94
LIMS2-203ENST00000409254 FMN1Q68DA7 1419 aa20.92■□□□□ 0.94
LIMS2-203ENST00000409254 EHMT2Q96KQ7 1210 aa20.91■□□□□ 0.94
LIMS2-203ENST00000409254 ARAP1Q96P48 1450 aa20.89■□□□□ 0.94
LIMS2-203ENST00000409254 FHOD3Q2V2M9 1422 aa20.86■□□□□ 0.93
LIMS2-203ENST00000409254 RAPGEF6Q8TEU7 1601 aa20.85■□□□□ 0.93
LIMS2-203ENST00000409254 ABCA8O94911 1581 aa20.85■□□□□ 0.93
LIMS2-203ENST00000409254 PTPRGP23470 1445 aa20.84■□□□□ 0.93
LIMS2-203ENST00000409254 UHRF1BP1LA0JNW5 1464 aa20.83■□□□□ 0.93
LIMS2-203ENST00000409254 HECW1Q76N89 1606 aa20.82■□□□□ 0.92
LIMS2-203ENST00000409254 FYCO1Q9BQS8 1478 aa20.81■□□□□ 0.92
LIMS2-203ENST00000409254 VPS8Q8N3P4 1428 aa20.8■□□□□ 0.92
LIMS2-203ENST00000409254 ABCC2Q92887 1545 aa20.8■□□□□ 0.92
LIMS2-203ENST00000409254 PCF11O94913 1555 aaKnown RBP20.78■□□□□ 0.92
LIMS2-203ENST00000409254 CASKIN1Q8WXD9 1431 aa20.77■□□□□ 0.91
LIMS2-203ENST00000409254 UACAQ9BZF9 1416 aa20.77■□□□□ 0.91
LIMS2-203ENST00000409254 ADCY10Q96PN6 1610 aa20.76■□□□□ 0.91
LIMS2-203ENST00000409254 RANGAP1P46060 587 aaPredicted RBP20.72■□□□□ 0.91
LIMS2-203ENST00000409254 CCDC18Q5T9S5 1454 aa20.72■□□□□ 0.91
LIMS2-203ENST00000409254 PLB1Q6P1J6 1458 aa20.72■□□□□ 0.91
LIMS2-203ENST00000409254 LRRIQ1Q96JM4 1722 aa20.71■□□□□ 0.91
LIMS2-203ENST00000409254 CFAP43Q8NDM7 1665 aa20.7■□□□□ 0.91
LIMS2-203ENST00000409254 MAP3K1Q13233 1512 aa20.7■□□□□ 0.9
LIMS2-203ENST00000409254 KDM5BQ9UGL1 1544 aa20.69■□□□□ 0.9
LIMS2-203ENST00000409254 P3H3Q8IVL6 736 aa20.69■□□□□ 0.9
LIMS2-203ENST00000409254 NUP153P49790 1475 aaKnown RBP20.69■□□□□ 0.9
LIMS2-203ENST00000409254 ZCCHC11Q5TAX3 1644 aaKnown RBP20.66■□□□□ 0.9
LIMS2-203ENST00000409254 EPRSP07814 1512 aaKnown RBP20.63■□□□□ 0.89
LIMS2-203ENST00000409254 MAPKBP1O60336 1514 aa20.62■□□□□ 0.89
LIMS2-203ENST00000409254 TIAM1Q13009 1591 aa20.6■□□□□ 0.89
LIMS2-203ENST00000409254 ATP10BO94823 1461 aa20.56■□□□□ 0.88
LIMS2-203ENST00000409254 CYB5RLQ6IPT4 315 aa20.56■□□□□ 0.88
LIMS2-203ENST00000409254 CDK13Q14004 1512 aaKnown RBP20.53■□□□□ 0.88
LIMS2-203ENST00000409254 EHBP1L1Q8N3D4 1523 aa20.53■□□□□ 0.88
LIMS2-203ENST00000409254 TTBK1Q5TCY1 1321 aaPredicted RBP20.5■□□□□ 0.87
LIMS2-203ENST00000409254 CDK11AQ9UQ88 783 aaPredicted RBP20.49■□□□□ 0.87
LIMS2-203ENST00000409254 WDR7Q9Y4E6 1490 aa20.49■□□□□ 0.87
LIMS2-203ENST00000409254 NPM1P06748 294 aaKnown RBP eCLIP20.48■□□□□ 0.87
LIMS2-203ENST00000409254 KIF14Q15058 1648 aa20.46■□□□□ 0.87
LIMS2-203ENST00000409254 SUPT6HQ7KZ85 1726 aaKnown RBP20.46■□□□□ 0.87
LIMS2-203ENST00000409254 TROQ12816 1431 aaPredicted RBP20.45■□□□□ 0.86
LIMS2-203ENST00000409254 LRRC9Q6ZRR7 1453 aa20.44■□□□□ 0.86
LIMS2-203ENST00000409254 ASXL2Q76L83 1435 aa20.44■□□□□ 0.86
LIMS2-203ENST00000409254 APLP2Q06481 763 aa20.43■□□□□ 0.86
LIMS2-203ENST00000409254 MAGI3Q5TCQ9 1506 aa20.43■□□□□ 0.86
LIMS2-203ENST00000409254 GLI2P10070 1586 aa20.42■□□□□ 0.86
LIMS2-203ENST00000409254 ABCA9Q8IUA7 1624 aa20.41■□□□□ 0.86
LIMS2-203ENST00000409254 MTUS2Q5JR59 1369 aa20.4■□□□□ 0.86
LIMS2-203ENST00000409254 KIF13AQ9H1H9 1805 aa20.39■□□□□ 0.86
LIMS2-203ENST00000409254 DIP2BQ9P265 1576 aa20.39■□□□□ 0.85
LIMS2-203ENST00000409254 ATP1B4Q9UN42 357 aaPredicted RBP20.39■□□□□ 0.85
LIMS2-203ENST00000409254 ITSN2Q9NZM3 1697 aa20.38■□□□□ 0.85
LIMS2-203ENST00000409254 PLEKHD1A6NEE1 506 aa20.38■□□□□ 0.85
LIMS2-203ENST00000409254 MYO5CQ9NQX4 1742 aa20.36■□□□□ 0.85
LIMS2-203ENST00000409254 ABCC10Q5T3U5 1492 aa20.36■□□□□ 0.85
LIMS2-203ENST00000409254 ARAP3Q8WWN8 1544 aa20.35■□□□□ 0.85
LIMS2-203ENST00000409254 MAP3K4Q9Y6R4 1608 aa20.34■□□□□ 0.85
LIMS2-203ENST00000409254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.85
LIMS2-203ENST00000409254 HNRNPUL2Q1KMD3 747 aaKnown RBP20.33■□□□□ 0.85
LIMS2-203ENST00000409254 CDC42BPAQ5VT25 1732 aa20.33■□□□□ 0.84
LIMS2-203ENST00000409254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.32■□□□□ 0.84
LIMS2-203ENST00000409254 PREX2Q70Z35 1606 aa20.31■□□□□ 0.84
LIMS2-203ENST00000409254 TTC37Q6PGP7 1564 aa20.31■□□□□ 0.84
LIMS2-203ENST00000409254 CFAP74Q9C0B2 1584 aa20.29■□□□□ 0.84
LIMS2-203ENST00000409254 NCOA2Q15596 1464 aa20.29■□□□□ 0.84
LIMS2-203ENST00000409254 ARID3CA6NKF2 412 aa20.27■□□□□ 0.84
LIMS2-203ENST00000409254 CDC42BPBQ9Y5S2 1711 aa20.26■□□□□ 0.83
LIMS2-203ENST00000409254 KANK4Q5T7N3 995 aaPredicted RBP20.23■□□□□ 0.83
LIMS2-203ENST00000409254 PPRC1Q5VV67 1664 aaKnown RBP20.21■□□□□ 0.83
LIMS2-203ENST00000409254 MYOM3Q5VTT5 1437 aa20.2■□□□□ 0.82
LIMS2-203ENST00000409254 MIA2Q96PC5 1412 aa20.2■□□□□ 0.82
LIMS2-203ENST00000409254 PLCH2O75038 1416 aa20.19■□□□□ 0.82
LIMS2-203ENST00000409254 TEX14Q8IWB6 1497 aa20.18■□□□□ 0.82
LIMS2-203ENST00000409254 GPATCH8Q9UKJ3 1502 aaKnown RBP20.18■□□□□ 0.82
LIMS2-203ENST00000409254 TRHP20396 242 aaPredicted RBP20.18■□□□□ 0.82
LIMS2-203ENST00000409254 CCNB3Q8WWL7 1395 aa20.18■□□□□ 0.82
LIMS2-203ENST00000409254 CD109Q6YHK3 1445 aa20.17■□□□□ 0.82
LIMS2-203ENST00000409254 NEO1Q92859 1461 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms