RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 JPH4Q96JJ6 628 aa12.37□□□□□ -0.43
SH3D19-202ENST00000409252 TOP2BQ02880 1626 aa12.36□□□□□ -0.43
SH3D19-202ENST00000409252 ZEB1P37275 1124 aaPredicted RBP12.35□□□□□ -0.43
SH3D19-202ENST00000409252 ESF1Q9H501 851 aaKnown RBP12.35□□□□□ -0.43
SH3D19-202ENST00000409252 FHAD1B1AJZ9 1412 aa12.35□□□□□ -0.43
SH3D19-202ENST00000409252 IGF1RP08069 1367 aa12.34□□□□□ -0.43
SH3D19-202ENST00000409252 URB2Q14146 1524 aaKnown RBP12.33□□□□□ -0.44
SH3D19-202ENST00000409252 SNAPC4Q5SXM2 1469 aa12.3□□□□□ -0.44
SH3D19-202ENST00000409252 TSPY4P0CV99 314 aa12.29□□□□□ -0.44
SH3D19-202ENST00000409252 TSPY10P0CW01 314 aa12.29□□□□□ -0.44
SH3D19-202ENST00000409252 CYB5RLQ6IPT4 315 aa12.29□□□□□ -0.44
SH3D19-202ENST00000409252 PLPPR3Q6T4P5 718 aa12.28□□□□□ -0.44
SH3D19-202ENST00000409252 CHIC2Q9UKJ5 165 aa12.27□□□□□ -0.44
SH3D19-202ENST00000409252 FHOD3Q2V2M9 1422 aa12.27□□□□□ -0.44
SH3D19-202ENST00000409252 FMN1Q68DA7 1419 aa12.27□□□□□ -0.45
SH3D19-202ENST00000409252 CFDP1Q9UEE9 299 aaPredicted RBP12.26□□□□□ -0.45
SH3D19-202ENST00000409252 PTPRGP23470 1445 aa12.25□□□□□ -0.45
SH3D19-202ENST00000409252 ABCA10Q8WWZ4 1543 aa12.25□□□□□ -0.45
SH3D19-202ENST00000409252 KIF21AQ7Z4S6 1674 aa12.23□□□□□ -0.45
SH3D19-202ENST00000409252 CCNB3Q8WWL7 1395 aa12.22□□□□□ -0.45
SH3D19-202ENST00000409252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.462e-8■■□□□ 12
SH3D19-202ENST00000409252 ZNF608Q9ULD9 1512 aaPredicted RBP12.2□□□□□ -0.46
SH3D19-202ENST00000409252 VPS8Q8N3P4 1428 aa12.2□□□□□ -0.46
SH3D19-202ENST00000409252 NEUROD1Q13562 356 aa12.2□□□□□ -0.46
SH3D19-202ENST00000409252 ARID4BQ4LE39 1312 aaPredicted RBP12.19□□□□□ -0.46
SH3D19-202ENST00000409252 POLR3GLQ9BT43 218 aa12.18□□□□□ -0.46
SH3D19-202ENST00000409252 BCANQ96GW7 911 aa12.17□□□□□ -0.46
SH3D19-202ENST00000409252 PRG4Q92954 1404 aaPredicted RBP12.16□□□□□ -0.46
SH3D19-202ENST00000409252 ZNF326Q5BKZ1 582 aaKnown RBP12.16□□□□□ -0.46
SH3D19-202ENST00000409252 MAGI1Q96QZ7 1491 aaPredicted RBP12.16□□□□□ -0.46
SH3D19-202ENST00000409252 SYNJ2O15056 1496 aa12.16□□□□□ -0.46
SH3D19-202ENST00000409252 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.46
SH3D19-202ENST00000409252 STAG3Q9UJ98 1225 aa12.15□□□□□ -0.46
SH3D19-202ENST00000409252 RRP7BPQ9NSQ0 103 aa12.14□□□□□ -0.47
SH3D19-202ENST00000409252 CHGAP10645 457 aaKnown RBP12.14□□□□□ -0.47
SH3D19-202ENST00000409252 ERICH3Q5RHP9 1530 aa12.13□□□□□ -0.47
SH3D19-202ENST00000409252 WDR62O43379 1518 aa12.12□□□□□ -0.47
SH3D19-202ENST00000409252 KIF21BO75037 1637 aa12.12□□□□□ -0.47
SH3D19-202ENST00000409252 CUL7Q14999 1698 aa12.1□□□□□ -0.47
SH3D19-202ENST00000409252 GRIN2AQ12879 1464 aa12.1□□□□□ -0.47
SH3D19-202ENST00000409252 PRXQ9BXM0 1461 aa12.09□□□□□ -0.47
SH3D19-202ENST00000409252 ARHGAP35Q9NRY4 1499 aa12.09□□□□□ -0.47
SH3D19-202ENST00000409252 EFCAB2Q5VUJ9 269 aa12.09□□□□□ -0.47
SH3D19-202ENST00000409252 PRDM2Q13029 1718 aa12.09□□□□□ -0.47
SH3D19-202ENST00000409252 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.48
SH3D19-202ENST00000409252 KANK4Q5T7N3 995 aaPredicted RBP12.07□□□□□ -0.48
SH3D19-202ENST00000409252 SLC4A1APQ9BWU0 796 aaKnown RBP12.07□□□□□ -0.48
SH3D19-202ENST00000409252 KIAA0586Q9BVV6 1533 aa12.07□□□□□ -0.48
SH3D19-202ENST00000409252 FAM69CQ0P6D2 419 aa12.03□□□□□ -0.48
SH3D19-202ENST00000409252 IQGAP2Q13576 1575 aa12.03□□□□□ -0.48
SH3D19-202ENST00000409252 MLECQ14165 292 aa12.03□□□□□ -0.48
SH3D19-202ENST00000409252 EIF4G3O43432 1585 aaKnown RBP12.02□□□□□ -0.48
SH3D19-202ENST00000409252 EFCAB5A4FU69 1503 aa12.01□□□□□ -0.49
SH3D19-202ENST00000409252 CNGB1Q14028 1251 aaPredicted RBP11.98□□□□□ -0.49
SH3D19-202ENST00000409252 TONSLQ96HA7 1378 aa11.97□□□□□ -0.49
SH3D19-202ENST00000409252 HNRNPMP52272 730 aaKnown RBP eCLIP11.97□□□□□ -0.492e-7■■■□□ 16
SH3D19-202ENST00000409252 CASKIN1Q8WXD9 1431 aa11.95□□□□□ -0.5
SH3D19-202ENST00000409252 ADAMTS12P58397 1594 aa11.95□□□□□ -0.5
SH3D19-202ENST00000409252 KANK1Q14678 1352 aa11.95□□□□□ -0.5
SH3D19-202ENST00000409252 SPAG9O60271 1321 aaKnown RBP11.94□□□□□ -0.5
SH3D19-202ENST00000409252 HRCP23327 699 aa11.94□□□□□ -0.5
SH3D19-202ENST00000409252 GGT6Q6P531 493 aa11.94□□□□□ -0.5
SH3D19-202ENST00000409252 ACIN1Q9UKV3 1341 aaKnown RBP11.94□□□□□ -0.5
SH3D19-202ENST00000409252 PPP1R15AO75807 674 aaPredicted RBP11.94□□□□□ -0.5
SH3D19-202ENST00000409252 UACAQ9BZF9 1416 aa11.93□□□□□ -0.5
SH3D19-202ENST00000409252 ARAP1Q96P48 1450 aa11.93□□□□□ -0.5
SH3D19-202ENST00000409252 THOC2Q8NI27 1593 aaKnown RBP11.92□□□□□ -0.5
SH3D19-202ENST00000409252 FYCO1Q9BQS8 1478 aa11.92□□□□□ -0.5
SH3D19-202ENST00000409252 SENP3Q9H4L4 574 aaPredicted RBP11.91□□□□□ -0.5
SH3D19-202ENST00000409252 ANKRD30AQ9BXX3 1397 aa11.91□□□□□ -0.5
SH3D19-202ENST00000409252 RSPH4AQ5TD94 716 aa11.9□□□□□ -0.5
SH3D19-202ENST00000409252 PBRM1Q86U86 1689 aa11.9□□□□□ -0.5
SH3D19-202ENST00000409252 HECW1Q76N89 1606 aa11.9□□□□□ -0.5
SH3D19-202ENST00000409252 KDM2AQ9Y2K7 1162 aa11.89□□□□□ -0.51
SH3D19-202ENST00000409252 KIF3BO15066 747 aa11.87□□□□□ -0.51
SH3D19-202ENST00000409252 WDR97A6NE52 1622 aa11.87□□□□□ -0.51
SH3D19-202ENST00000409252 ABCA5Q8WWZ7 1642 aa11.87□□□□□ -0.51
SH3D19-202ENST00000409252 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
SH3D19-202ENST00000409252 PLB1Q6P1J6 1458 aa11.86□□□□□ -0.51
SH3D19-202ENST00000409252 RGL3Q3MIN7 710 aa11.86□□□□□ -0.51
SH3D19-202ENST00000409252 ARHGAP5Q13017 1502 aa11.85□□□□□ -0.51
SH3D19-202ENST00000409252 LRRC9Q6ZRR7 1453 aa11.84□□□□□ -0.51
SH3D19-202ENST00000409252 CDK13Q14004 1512 aaKnown RBP11.83□□□□□ -0.52
SH3D19-202ENST00000409252 TROQ12816 1431 aaPredicted RBP11.82□□□□□ -0.52
SH3D19-202ENST00000409252 NCOA2Q15596 1464 aa11.82□□□□□ -0.52
SH3D19-202ENST00000409252 MYOM3Q5VTT5 1437 aa11.81□□□□□ -0.52
SH3D19-202ENST00000409252 SETD5Q9C0A6 1442 aa11.81□□□□□ -0.52
SH3D19-202ENST00000409252 EPRSP07814 1512 aaKnown RBP11.81□□□□□ -0.52
SH3D19-202ENST00000409252 EHBP1L1Q8N3D4 1523 aa11.81□□□□□ -0.52
SH3D19-202ENST00000409252 NUP160Q12769 1436 aa11.8□□□□□ -0.52
SH3D19-202ENST00000409252 NUP155O75694 1391 aa11.8□□□□□ -0.52
SH3D19-202ENST00000409252 WASHC2CQ9Y4E1 1318 aa11.8□□□□□ -0.52
SH3D19-202ENST00000409252 CTTNBP2Q8WZ74 1663 aa11.79□□□□□ -0.52
SH3D19-202ENST00000409252 ZNF644Q9H582 1327 aaPredicted RBP11.79□□□□□ -0.52
SH3D19-202ENST00000409252 PCF11O94913 1555 aaKnown RBP11.79□□□□□ -0.52
SH3D19-202ENST00000409252 C14orf37Q86TY3 774 aa11.79□□□□□ -0.52
SH3D19-202ENST00000409252 FGD6Q6ZV73 1430 aa11.78□□□□□ -0.52
SH3D19-202ENST00000409252 PKD2Q13563 968 aa11.77□□□□□ -0.52
SH3D19-202ENST00000409252 PHLDB1Q86UU1 1377 aa11.76□□□□□ -0.53
SH3D19-202ENST00000409252 YTHDC1Q96MU7 727 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms