RNA–Protein interactions for RNA: ENST00000409249.5

LOXL3-203, Transcript of lysyl oxidase like 3, humanhuman

TSL 5 BASIC

Gene LOXL3, Length 2,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-203ENST00000409249 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
LOXL3-203ENST00000409249 ATP1B4Q9UN42 357 aaPredicted RBP24.39■■□□□ 1.5
LOXL3-203ENST00000409249 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.49
LOXL3-203ENST00000409249 FHOD3Q2V2M9 1422 aa24.36■■□□□ 1.49
LOXL3-203ENST00000409249 CTTNBP2Q8WZ74 1663 aa24.33■■□□□ 1.49
LOXL3-203ENST00000409249 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
LOXL3-203ENST00000409249 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
LOXL3-203ENST00000409249 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
LOXL3-203ENST00000409249 WDR62O43379 1518 aa24.25■■□□□ 1.47
LOXL3-203ENST00000409249 TIAM1Q13009 1591 aa24.25■■□□□ 1.47
LOXL3-203ENST00000409249 EFCAB5A4FU69 1503 aa24.25■■□□□ 1.47
LOXL3-203ENST00000409249 PBRM1Q86U86 1689 aa24.24■■□□□ 1.47
LOXL3-203ENST00000409249 PCF11O94913 1555 aaKnown RBP24.23■■□□□ 1.47
LOXL3-203ENST00000409249 IFT140Q96RY7 1462 aa24.22■■□□□ 1.47
LOXL3-203ENST00000409249 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
LOXL3-203ENST00000409249 RRBP1Q9P2E9 1410 aaKnown RBP24.19■■□□□ 1.46
LOXL3-203ENST00000409249 MAP3K1Q13233 1512 aa24.19■■□□□ 1.46
LOXL3-203ENST00000409249 LRRC9Q6ZRR7 1453 aa24.18■■□□□ 1.46
LOXL3-203ENST00000409249 ITGAEP38570 1179 aa24.18■■□□□ 1.46
LOXL3-203ENST00000409249 CCNB3Q8WWL7 1395 aa24.16■■□□□ 1.46
LOXL3-203ENST00000409249 CASKIN1Q8WXD9 1431 aa24.14■■□□□ 1.46
LOXL3-203ENST00000409249 FMN1Q68DA7 1419 aa24.13■■□□□ 1.45
LOXL3-203ENST00000409249 ADAMTS12P58397 1594 aa24.13■■□□□ 1.45
LOXL3-203ENST00000409249 FYCO1Q9BQS8 1478 aa24.12■■□□□ 1.45
LOXL3-203ENST00000409249 ACIN1Q9UKV3 1341 aaKnown RBP24.11■■□□□ 1.45
LOXL3-203ENST00000409249 SAMD9Q5K651 1589 aa24.1■■□□□ 1.45
LOXL3-203ENST00000409249 PHLDB1Q86UU1 1377 aa24.09■■□□□ 1.45
LOXL3-203ENST00000409249 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.45
LOXL3-203ENST00000409249 CFAP43Q8NDM7 1665 aa24.08■■□□□ 1.44
LOXL3-203ENST00000409249 SNAPC4Q5SXM2 1469 aa24.05■■□□□ 1.44
LOXL3-203ENST00000409249 NEUROD1Q13562 356 aa24.04■■□□□ 1.44
LOXL3-203ENST00000409249 EIF4G3O43432 1585 aaKnown RBP24.04■■□□□ 1.44
LOXL3-203ENST00000409249 FAM50AQ14320 339 aaKnown RBP24.03■■□□□ 1.44
LOXL3-203ENST00000409249 IQGAP2Q13576 1575 aa24.02■■□□□ 1.44
LOXL3-203ENST00000409249 DIEXFQ68CQ4 756 aaKnown RBP24■■□□□ 1.43
LOXL3-203ENST00000409249 FBLN2P98095 1184 aa23.99■■□□□ 1.43
LOXL3-203ENST00000409249 MTUS2Q5JR59 1369 aa23.96■■□□□ 1.43
LOXL3-203ENST00000409249 CHMP7Q8WUX9 453 aaPredicted RBP23.96■■□□□ 1.43
LOXL3-203ENST00000409249 DHX57Q6P158 1386 aaKnown RBP23.93■■□□□ 1.42
LOXL3-203ENST00000409249 LRRIQ1Q96JM4 1722 aa23.93■■□□□ 1.42
LOXL3-203ENST00000409249 GRIN2AQ12879 1464 aa23.92■■□□□ 1.42
LOXL3-203ENST00000409249 CENPBP07199 599 aaPredicted RBP23.92■■□□□ 1.42
LOXL3-203ENST00000409249 ARID3CA6NKF2 412 aa23.91■■□□□ 1.42
LOXL3-203ENST00000409249 KIAA0586Q9BVV6 1533 aa23.89■■□□□ 1.42
LOXL3-203ENST00000409249 MAGI1Q96QZ7 1491 aaPredicted RBP23.86■■□□□ 1.41
LOXL3-203ENST00000409249 UGGT2Q9NYU1 1516 aa23.86■■□□□ 1.41
LOXL3-203ENST00000409249 GTF3C3Q9Y5Q9 886 aa23.85■■□□□ 1.41
LOXL3-203ENST00000409249 RAB3GAP2Q9H2M9 1393 aa23.84■■□□□ 1.41
LOXL3-203ENST00000409249 SYNJ2O15056 1496 aa23.83■■□□□ 1.41
LOXL3-203ENST00000409249 DISP1Q96F81 1524 aa23.8■■□□□ 1.4
LOXL3-203ENST00000409249 FGD6Q6ZV73 1430 aa23.79■■□□□ 1.4
LOXL3-203ENST00000409249 NCOA2Q15596 1464 aa23.79■■□□□ 1.4
LOXL3-203ENST00000409249 SETD5Q9C0A6 1442 aa23.78■■□□□ 1.4
LOXL3-203ENST00000409249 CLSPNQ9HAW4 1339 aa23.78■■□□□ 1.4
LOXL3-203ENST00000409249 HECW1Q76N89 1606 aa23.77■■□□□ 1.4
LOXL3-203ENST00000409249 MAGI3Q5TCQ9 1506 aa23.77■■□□□ 1.4
LOXL3-203ENST00000409249 CEP170Q5SW79 1584 aa23.77■■□□□ 1.4
LOXL3-203ENST00000409249 EPRSP07814 1512 aaKnown RBP23.77■■□□□ 1.4
LOXL3-203ENST00000409249 CCDC18Q5T9S5 1454 aa23.76■■□□□ 1.39
LOXL3-203ENST00000409249 KIAA0556O60303 1618 aa23.76■■□□□ 1.39
LOXL3-203ENST00000409249 CDK13Q14004 1512 aaKnown RBP23.75■■□□□ 1.39
LOXL3-203ENST00000409249 ZNF316A6NFI3 1004 aaPredicted RBP23.75■■□□□ 1.39
LOXL3-203ENST00000409249 EHBP1L1Q8N3D4 1523 aa23.74■■□□□ 1.39
LOXL3-203ENST00000409249 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
LOXL3-203ENST00000409249 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.72■■□□□ 1.39
LOXL3-203ENST00000409249 JPH4Q96JJ6 628 aa23.72■■□□□ 1.39
LOXL3-203ENST00000409249 MYOM3Q5VTT5 1437 aa23.71■■□□□ 1.39
LOXL3-203ENST00000409249 NUP160Q12769 1436 aa23.67■■□□□ 1.38
LOXL3-203ENST00000409249 PTPRKQ15262 1439 aa23.64■■□□□ 1.38
LOXL3-203ENST00000409249 NUP153P49790 1475 aaKnown RBP23.62■■□□□ 1.37
LOXL3-203ENST00000409249 ARHGEF11O15085 1522 aa23.62■■□□□ 1.37
LOXL3-203ENST00000409249 RAPGEF6Q8TEU7 1601 aa23.61■■□□□ 1.37
LOXL3-203ENST00000409249 CARMIL2Q6F5E8 1435 aa23.6■■□□□ 1.37
LOXL3-203ENST00000409249 PTPN23Q9H3S7 1636 aa23.59■■□□□ 1.37
LOXL3-203ENST00000409249 PLB1Q6P1J6 1458 aa23.59■■□□□ 1.37
LOXL3-203ENST00000409249 MAPKBP1O60336 1514 aa23.58■■□□□ 1.37
LOXL3-203ENST00000409249 CHIC2Q9UKJ5 165 aa23.57■■□□□ 1.36
LOXL3-203ENST00000409249 CDK11AQ9UQ88 783 aaPredicted RBP23.55■■□□□ 1.36
LOXL3-203ENST00000409249 SIN3AQ96ST3 1273 aa23.54■■□□□ 1.36
LOXL3-203ENST00000409249 RRP7BPQ9NSQ0 103 aa23.52■■□□□ 1.36
LOXL3-203ENST00000409249 HFM1A2PYH4 1435 aa23.5■■□□□ 1.35
LOXL3-203ENST00000409249 PRG4Q92954 1404 aaPredicted RBP23.49■■□□□ 1.35
LOXL3-203ENST00000409249 TCOF1Q13428 1488 aaKnown RBP23.48■■□□□ 1.35
LOXL3-203ENST00000409249 MYT1Q01538 1121 aa23.48■■□□□ 1.35
LOXL3-203ENST00000409249 NAIPQ13075 1403 aa23.47■■□□□ 1.35
LOXL3-203ENST00000409249 YTHDC1Q96MU7 727 aaKnown RBP23.47■■□□□ 1.35
LOXL3-203ENST00000409249 MIA2Q96PC5 1412 aa23.47■■□□□ 1.35
LOXL3-203ENST00000409249 ZNF644Q9H582 1327 aaPredicted RBP23.46■■□□□ 1.35
LOXL3-203ENST00000409249 CHD1O14646 1710 aa23.44■■□□□ 1.34
LOXL3-203ENST00000409249 TROQ12816 1431 aaPredicted RBP23.42■■□□□ 1.34
LOXL3-203ENST00000409249 MIER1Q8N108 512 aa23.41■■□□□ 1.34
LOXL3-203ENST00000409249 PTPRGP23470 1445 aa23.38■■□□□ 1.33
LOXL3-203ENST00000409249 PLEKHD1A6NEE1 506 aa23.38■■□□□ 1.33
LOXL3-203ENST00000409249 UACAQ9BZF9 1416 aa23.37■■□□□ 1.33
LOXL3-203ENST00000409249 CFDP1Q9UEE9 299 aaPredicted RBP23.37■■□□□ 1.33
LOXL3-203ENST00000409249 ZNF777Q9ULD5 760 aaPredicted RBP23.37■■□□□ 1.33
LOXL3-203ENST00000409249 ABCA8O94911 1581 aa23.36■■□□□ 1.33
LOXL3-203ENST00000409249 TRIM52Q96A61 297 aa23.35■■□□□ 1.33
LOXL3-203ENST00000409249 ATP10BO94823 1461 aa23.35■■□□□ 1.33
LOXL3-203ENST00000409249 KIF14Q15058 1648 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms