RNA–Protein interactions for RNA: ENST00000408968.3

IFITM1-202, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFITM1, Length 855 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-202ENST00000408968 IGF1RP08069 1367 aa22.74■■□□□ 1.23
IFITM1-202ENST00000408968 CARMIL1Q5VZK9 1371 aa22.64■■□□□ 1.22
IFITM1-202ENST00000408968 CYB5RLQ6IPT4 315 aa22.64■■□□□ 1.21
IFITM1-202ENST00000408968 KIAA0586Q9BVV6 1533 aa22.63■■□□□ 1.21
IFITM1-202ENST00000408968 RAPGEF2Q9Y4G8 1499 aa22.57■■□□□ 1.2
IFITM1-202ENST00000408968 ERCC6L2Q5T890 1561 aa22.57■■□□□ 1.2
IFITM1-202ENST00000408968 PRG4Q92954 1404 aaPredicted RBP22.56■■□□□ 1.2
IFITM1-202ENST00000408968 IQGAP2Q13576 1575 aa22.55■■□□□ 1.2
IFITM1-202ENST00000408968 CTTNBP2Q8WZ74 1663 aa22.52■■□□□ 1.2
IFITM1-202ENST00000408968 JPH4Q96JJ6 628 aa22.51■■□□□ 1.19
IFITM1-202ENST00000408968 EEA1Q15075 1411 aa22.49■■□□□ 1.19
IFITM1-202ENST00000408968 CARMIL2Q6F5E8 1435 aa22.43■■□□□ 1.18
IFITM1-202ENST00000408968 PRXQ9BXM0 1461 aa22.42■■□□□ 1.18
IFITM1-202ENST00000408968 UGGT2Q9NYU1 1516 aa22.39■■□□□ 1.17
IFITM1-202ENST00000408968 KIAA0556O60303 1618 aa22.32■■□□□ 1.16
IFITM1-202ENST00000408968 TNIKQ9UKE5 1360 aa22.31■■□□□ 1.16
IFITM1-202ENST00000408968 ADCY10Q96PN6 1610 aa22.31■■□□□ 1.16
IFITM1-202ENST00000408968 GOLGA3Q08378 1498 aa22.3■■□□□ 1.16
IFITM1-202ENST00000408968 DISP1Q96F81 1524 aa22.29■■□□□ 1.16
IFITM1-202ENST00000408968 KIF21BO75037 1637 aa22.28■■□□□ 1.16
IFITM1-202ENST00000408968 CSRNP3Q8WYN3 585 aa22.27■■□□□ 1.16
IFITM1-202ENST00000408968 MAPKBP1O60336 1514 aa22.26■■□□□ 1.15
IFITM1-202ENST00000408968 PTPRGP23470 1445 aa22.26■■□□□ 1.15
IFITM1-202ENST00000408968 TRHP20396 242 aaPredicted RBP22.26■■□□□ 1.15
IFITM1-202ENST00000408968 NPM1P06748 294 aaKnown RBP eCLIP22.2■■□□□ 1.14
IFITM1-202ENST00000408968 UHRF1BP1LA0JNW5 1464 aa22.2■■□□□ 1.14
IFITM1-202ENST00000408968 ABCC2Q92887 1545 aa22.18■■□□□ 1.14
IFITM1-202ENST00000408968 KIF13AQ9H1H9 1805 aa22.17■■□□□ 1.14
IFITM1-202ENST00000408968 UACAQ9BZF9 1416 aa22.14■■□□□ 1.14
IFITM1-202ENST00000408968 SAMD9Q5K651 1589 aa22.13■■□□□ 1.13
IFITM1-202ENST00000408968 DIP2BQ9P265 1576 aa22.11■■□□□ 1.13
IFITM1-202ENST00000408968 ABCC10Q5T3U5 1492 aa22.09■■□□□ 1.13
IFITM1-202ENST00000408968 FAM9AQ8IZU1 332 aaPredicted RBP22.08■■□□□ 1.13
IFITM1-202ENST00000408968 FOXD1Q16676 465 aa22.07■■□□□ 1.12
IFITM1-202ENST00000408968 EFCAB5A4FU69 1503 aa22.06■■□□□ 1.12
IFITM1-202ENST00000408968 KDM5BQ9UGL1 1544 aa22.06■■□□□ 1.12
IFITM1-202ENST00000408968 ZCCHC11Q5TAX3 1644 aaKnown RBP22.06■■□□□ 1.12
IFITM1-202ENST00000408968 ABCA8O94911 1581 aa22.05■■□□□ 1.12
IFITM1-202ENST00000408968 PLB1Q6P1J6 1458 aa22.05■■□□□ 1.12
IFITM1-202ENST00000408968 TTBK1Q5TCY1 1321 aaPredicted RBP22.03■■□□□ 1.12
IFITM1-202ENST00000408968 GLI2P10070 1586 aa21.98■■□□□ 1.11
IFITM1-202ENST00000408968 ASXL2Q76L83 1435 aa21.97■■□□□ 1.11
IFITM1-202ENST00000408968 RAPGEF6Q8TEU7 1601 aa21.95■■□□□ 1.1
IFITM1-202ENST00000408968 FAM69CQ0P6D2 419 aa21.92■■□□□ 1.1
IFITM1-202ENST00000408968 WDR7Q9Y4E6 1490 aa21.9■■□□□ 1.1
IFITM1-202ENST00000408968 TSPOAP1O95153 1857 aa21.89■■□□□ 1.09
IFITM1-202ENST00000408968 MAP3K4Q9Y6R4 1608 aa21.88■■□□□ 1.09
IFITM1-202ENST00000408968 EPRSP07814 1512 aaKnown RBP21.87■■□□□ 1.09
IFITM1-202ENST00000408968 UBTFP17480 764 aaKnown RBP21.86■■□□□ 1.09
IFITM1-202ENST00000408968 FHOD3Q2V2M9 1422 aa21.85■■□□□ 1.09
IFITM1-202ENST00000408968 CFAP43Q8NDM7 1665 aa21.85■■□□□ 1.09
IFITM1-202ENST00000408968 P3H3Q8IVL6 736 aa21.82■■□□□ 1.08
IFITM1-202ENST00000408968 KDM6BO15054 1643 aa21.81■■□□□ 1.08
IFITM1-202ENST00000408968 TEX14Q8IWB6 1497 aa21.81■■□□□ 1.08
IFITM1-202ENST00000408968 PPRC1Q5VV67 1664 aaKnown RBP21.81■■□□□ 1.08
IFITM1-202ENST00000408968 FMN1Q68DA7 1419 aa21.8■■□□□ 1.08
IFITM1-202ENST00000408968 ATP10BO94823 1461 aa21.77■■□□□ 1.08
IFITM1-202ENST00000408968 NUP153P49790 1475 aaKnown RBP21.77■■□□□ 1.08
IFITM1-202ENST00000408968 HECW1Q76N89 1606 aa21.77■■□□□ 1.08
IFITM1-202ENST00000408968 ARHGAP35Q9NRY4 1499 aa21.76■■□□□ 1.07
IFITM1-202ENST00000408968 RANGAP1P46060 587 aaPredicted RBP21.75■■□□□ 1.07
IFITM1-202ENST00000408968 ABCA9Q8IUA7 1624 aa21.72■■□□□ 1.07
IFITM1-202ENST00000408968 MAGI3Q5TCQ9 1506 aa21.7■■□□□ 1.07
IFITM1-202ENST00000408968 EHMT2Q96KQ7 1210 aa21.67■■□□□ 1.06
IFITM1-202ENST00000408968 CD109Q6YHK3 1445 aa21.66■■□□□ 1.06
IFITM1-202ENST00000408968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
IFITM1-202ENST00000408968 HNRNPUL2Q1KMD3 747 aaKnown RBP21.62■■□□□ 1.05
IFITM1-202ENST00000408968 CFAP74Q9C0B2 1584 aa21.61■■□□□ 1.05
IFITM1-202ENST00000408968 CLIP1P30622 1438 aa21.6■■□□□ 1.05
IFITM1-202ENST00000408968 CCDC18Q5T9S5 1454 aa21.59■■□□□ 1.05
IFITM1-202ENST00000408968 ARID3CA6NKF2 412 aa21.59■■□□□ 1.05
IFITM1-202ENST00000408968 PCF11O94913 1555 aaKnown RBP21.59■■□□□ 1.05
IFITM1-202ENST00000408968 KCNH8Q96L42 1107 aa21.59■■□□□ 1.05
IFITM1-202ENST00000408968 CDK13Q14004 1512 aaKnown RBP21.59■■□□□ 1.05
IFITM1-202ENST00000408968 FYCO1Q9BQS8 1478 aa21.58■■□□□ 1.04
IFITM1-202ENST00000408968 PLEKHD1A6NEE1 506 aa21.57■■□□□ 1.04
IFITM1-202ENST00000408968 PHLDB1Q86UU1 1377 aa21.57■■□□□ 1.04
IFITM1-202ENST00000408968 CASKIN1Q8WXD9 1431 aa21.55■■□□□ 1.04
IFITM1-202ENST00000408968 LRRIQ1Q96JM4 1722 aa21.55■■□□□ 1.04
IFITM1-202ENST00000408968 NEO1Q92859 1461 aa21.54■■□□□ 1.04
IFITM1-202ENST00000408968 KIF14Q15058 1648 aa21.54■■□□□ 1.04
IFITM1-202ENST00000408968 CDK11AQ9UQ88 783 aaPredicted RBP21.53■■□□□ 1.04
IFITM1-202ENST00000408968 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.51■■□□□ 1.03
IFITM1-202ENST00000408968 ARAP3Q8WWN8 1544 aa21.51■■□□□ 1.03
IFITM1-202ENST00000408968 MYO5CQ9NQX4 1742 aa21.5■■□□□ 1.03
IFITM1-202ENST00000408968 TTC37Q6PGP7 1564 aa21.5■■□□□ 1.03
IFITM1-202ENST00000408968 TROQ12816 1431 aaPredicted RBP21.46■■□□□ 1.03
IFITM1-202ENST00000408968 CEP162Q5TB80 1403 aa21.46■■□□□ 1.03
IFITM1-202ENST00000408968 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
IFITM1-202ENST00000408968 COL17A1Q9UMD9 1497 aaPredicted RBP21.45■■□□□ 1.02
IFITM1-202ENST00000408968 FANCAO15360 1455 aa21.42■■□□□ 1.02
IFITM1-202ENST00000408968 RICTORQ6R327 1708 aa21.38■■□□□ 1.01
IFITM1-202ENST00000408968 PLCH2O75038 1416 aa21.37■■□□□ 1.01
IFITM1-202ENST00000408968 PREX2Q70Z35 1606 aa21.36■■□□□ 1.01
IFITM1-202ENST00000408968 FRMPD1Q5SYB0 1578 aa21.35■■□□□ 1.01
IFITM1-202ENST00000408968 AKNAQ7Z591 1439 aa21.34■■□□□ 1.01
IFITM1-202ENST00000408968 DENND4BO75064 1496 aaPredicted RBP21.33■■□□□ 1.01
IFITM1-202ENST00000408968 ZMYM4Q5VZL5 1548 aa21.32■■□□□ 1
IFITM1-202ENST00000408968 ARHGAP5Q13017 1502 aa21.3■■□□□ 1
IFITM1-202ENST00000408968 EHBP1L1Q8N3D4 1523 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms