RNA–Protein interactions for RNA: ENST00000407704.1

ITSN2-204, Transcript of intersectin 2, humanhuman

TSL 4

Gene ITSN2, Length 597 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-204ENST00000407704 IGF1RP08069 1367 aa35.02■■■■□ 3.2
ITSN2-204ENST00000407704 CUL7Q14999 1698 aa34.98■■■■□ 3.19
ITSN2-204ENST00000407704 KIAA0586Q9BVV6 1533 aa34.85■■■■□ 3.17
ITSN2-204ENST00000407704 CARMIL1Q5VZK9 1371 aa34.8■■■■□ 3.16
ITSN2-204ENST00000407704 KIF13AQ9H1H9 1805 aa34.79■■■■□ 3.16
ITSN2-204ENST00000407704 ADCY10Q96PN6 1610 aa34.7■■■■□ 3.15
ITSN2-204ENST00000407704 NPM1P06748 294 aaKnown RBP eCLIP34.63■■■■□ 3.13
ITSN2-204ENST00000407704 IQGAP2Q13576 1575 aa34.57■■■■□ 3.13
ITSN2-204ENST00000407704 TTBK1Q5TCY1 1321 aaPredicted RBP34.57■■■■□ 3.13
ITSN2-204ENST00000407704 MAPKBP1O60336 1514 aa34.56■■■■□ 3.12
ITSN2-204ENST00000407704 FAM69CQ0P6D2 419 aa34.53■■■■□ 3.12
ITSN2-204ENST00000407704 ABCC10Q5T3U5 1492 aa34.52■■■■□ 3.12
ITSN2-204ENST00000407704 PTPRGP23470 1445 aa34.52■■■■□ 3.12
ITSN2-204ENST00000407704 CARMIL2Q6F5E8 1435 aa34.49■■■■□ 3.11
ITSN2-204ENST00000407704 RAPGEF2Q9Y4G8 1499 aa34.49■■■■□ 3.11
ITSN2-204ENST00000407704 DIP2BQ9P265 1576 aa34.49■■■■□ 3.11
ITSN2-204ENST00000407704 TNIKQ9UKE5 1360 aa34.46■■■■□ 3.11
ITSN2-204ENST00000407704 DISP1Q96F81 1524 aa34.4■■■■□ 3.1
ITSN2-204ENST00000407704 TSPOAP1O95153 1857 aa34.39■■■■□ 3.1
ITSN2-204ENST00000407704 AEBP2Q6ZN18 517 aaPredicted RBP34.34■■■■□ 3.09
ITSN2-204ENST00000407704 UGGT2Q9NYU1 1516 aa34.33■■■■□ 3.09
ITSN2-204ENST00000407704 ABCC2Q92887 1545 aa34.32■■■■□ 3.08
ITSN2-204ENST00000407704 CTTNBP2Q8WZ74 1663 aa34.31■■■■□ 3.08
ITSN2-204ENST00000407704 KIAA0556O60303 1618 aa34.28■■■■□ 3.08
ITSN2-204ENST00000407704 UACAQ9BZF9 1416 aa34.27■■■■□ 3.08
ITSN2-204ENST00000407704 UHRF1BP1LA0JNW5 1464 aa34.26■■■■□ 3.07
ITSN2-204ENST00000407704 ASXL2Q76L83 1435 aa34.21■■■■□ 3.07
ITSN2-204ENST00000407704 KDM6BO15054 1643 aa34.17■■■■□ 3.06
ITSN2-204ENST00000407704 PLB1Q6P1J6 1458 aa34.15■■■■□ 3.06
ITSN2-204ENST00000407704 PRXQ9BXM0 1461 aa34.15■■■■□ 3.06
ITSN2-204ENST00000407704 ZCCHC11Q5TAX3 1644 aaKnown RBP34.14■■■■□ 3.06
ITSN2-204ENST00000407704 KDM5BQ9UGL1 1544 aa34.12■■■■□ 3.05
ITSN2-204ENST00000407704 PPRC1Q5VV67 1664 aaKnown RBP34.09■■■■□ 3.05
ITSN2-204ENST00000407704 GLI2P10070 1586 aa34.09■■■■□ 3.05
ITSN2-204ENST00000407704 GOLGA3Q08378 1498 aa34.03■■■■□ 3.04
ITSN2-204ENST00000407704 EPRSP07814 1512 aaKnown RBP34.01■■■■□ 3.04
ITSN2-204ENST00000407704 MAP3K4Q9Y6R4 1608 aa33.97■■■■□ 3.03
ITSN2-204ENST00000407704 ABCA8O94911 1581 aa33.95■■■■□ 3.03
ITSN2-204ENST00000407704 CSRNP3Q8WYN3 585 aa33.93■■■■□ 3.02
ITSN2-204ENST00000407704 P3H3Q8IVL6 736 aa33.88■■■■□ 3.01
ITSN2-204ENST00000407704 WDR7Q9Y4E6 1490 aa33.88■■■■□ 3.01
ITSN2-204ENST00000407704 COL17A1Q9UMD9 1497 aaPredicted RBP33.81■■■■□ 3
ITSN2-204ENST00000407704 TEX14Q8IWB6 1497 aa33.78■■■■□ 3
ITSN2-204ENST00000407704 KDM4FA0A1W2PPD8 638 aa33.78■■■■□ 3
ITSN2-204ENST00000407704 KCNH8Q96L42 1107 aa33.78■■■■□ 3
ITSN2-204ENST00000407704 SAMD9Q5K651 1589 aa33.77■■■■□ 3
ITSN2-204ENST00000407704 ARID3CA6NKF2 412 aa33.76■■■□□ 2.99
ITSN2-204ENST00000407704 FAM9AQ8IZU1 332 aaPredicted RBP33.76■■■□□ 2.99
ITSN2-204ENST00000407704 EEA1Q15075 1411 aa33.74■■■□□ 2.99
ITSN2-204ENST00000407704 CFAP43Q8NDM7 1665 aa33.72■■■□□ 2.99
ITSN2-204ENST00000407704 RANGAP1P46060 587 aaPredicted RBP33.7■■■□□ 2.99
ITSN2-204ENST00000407704 CD109Q6YHK3 1445 aa33.67■■■□□ 2.98
ITSN2-204ENST00000407704 ATP10BO94823 1461 aa33.66■■■□□ 2.98
ITSN2-204ENST00000407704 RAPGEF6Q8TEU7 1601 aa33.64■■■□□ 2.98
ITSN2-204ENST00000407704 MAGI3Q5TCQ9 1506 aa33.62■■■□□ 2.97
ITSN2-204ENST00000407704 KIF21BO75037 1637 aa33.56■■■□□ 2.96
ITSN2-204ENST00000407704 FHOD3Q2V2M9 1422 aa33.55■■■□□ 2.96
ITSN2-204ENST00000407704 ADGRL1O94910 1474 aa33.53■■■□□ 2.96
ITSN2-204ENST00000407704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.49■■■□□ 2.95
ITSN2-204ENST00000407704 HNRNPUL2Q1KMD3 747 aaKnown RBP33.49■■■□□ 2.95
ITSN2-204ENST00000407704 ABCA9Q8IUA7 1624 aa33.47■■■□□ 2.95
ITSN2-204ENST00000407704 EHMT2Q96KQ7 1210 aa33.47■■■□□ 2.95
ITSN2-204ENST00000407704 NUP153P49790 1475 aaKnown RBP33.47■■■□□ 2.95
ITSN2-204ENST00000407704 CHIC1Q5VXU3 224 aa33.43■■■□□ 2.94
ITSN2-204ENST00000407704 EFCAB5A4FU69 1503 aa33.39■■■□□ 2.94
ITSN2-204ENST00000407704 ARAP3Q8WWN8 1544 aa33.36■■■□□ 2.93
ITSN2-204ENST00000407704 UBTFP17480 764 aaKnown RBP33.32■■■□□ 2.92
ITSN2-204ENST00000407704 PLEKHD1A6NEE1 506 aa33.26■■■□□ 2.91
ITSN2-204ENST00000407704 PHLDB1Q86UU1 1377 aa33.23■■■□□ 2.91
ITSN2-204ENST00000407704 NEO1Q92859 1461 aa33.23■■■□□ 2.91
ITSN2-204ENST00000407704 RAPGEF3O95398 923 aa33.22■■■□□ 2.91
ITSN2-204ENST00000407704 CDK13Q14004 1512 aaKnown RBP33.21■■■□□ 2.91
ITSN2-204ENST00000407704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.18■■■□□ 2.9
ITSN2-204ENST00000407704 FRMPD1Q5SYB0 1578 aa33.17■■■□□ 2.9
ITSN2-204ENST00000407704 ARHGAP35Q9NRY4 1499 aa33.16■■■□□ 2.9
ITSN2-204ENST00000407704 TTC37Q6PGP7 1564 aa33.15■■■□□ 2.9
ITSN2-204ENST00000407704 ATP1B4Q9UN42 357 aaPredicted RBP33.13■■■□□ 2.89
ITSN2-204ENST00000407704 HECW1Q76N89 1606 aa33.08■■■□□ 2.89
ITSN2-204ENST00000407704 FMN1Q68DA7 1419 aa33.08■■■□□ 2.89
ITSN2-204ENST00000407704 RICTORQ6R327 1708 aa33.07■■■□□ 2.88
ITSN2-204ENST00000407704 FANCAO15360 1455 aa33.06■■■□□ 2.88
ITSN2-204ENST00000407704 AKNAQ7Z591 1439 aa33.06■■■□□ 2.88
ITSN2-204ENST00000407704 CFAP74Q9C0B2 1584 aa33.05■■■□□ 2.88
ITSN2-204ENST00000407704 HECW2Q9P2P5 1572 aa33.05■■■□□ 2.88
ITSN2-204ENST00000407704 DENND4BO75064 1496 aaPredicted RBP33.02■■■□□ 2.88
ITSN2-204ENST00000407704 LRRIQ1Q96JM4 1722 aa33.02■■■□□ 2.88
ITSN2-204ENST00000407704 ADAMTSL3P82987 1691 aa33■■■□□ 2.87
ITSN2-204ENST00000407704 BCORL1Q5H9F3 1711 aa32.96■■■□□ 2.87
ITSN2-204ENST00000407704 ARHGEF40Q8TER5 1519 aa32.94■■■□□ 2.86
ITSN2-204ENST00000407704 KIF14Q15058 1648 aa32.94■■■□□ 2.86
ITSN2-204ENST00000407704 MYO5CQ9NQX4 1742 aa32.94■■■□□ 2.86
ITSN2-204ENST00000407704 ARID4BQ4LE39 1312 aaPredicted RBP32.93■■■□□ 2.86
ITSN2-204ENST00000407704 PLCH2O75038 1416 aa32.92■■■□□ 2.86
ITSN2-204ENST00000407704 CDK11AQ9UQ88 783 aaPredicted RBP32.89■■■□□ 2.86
ITSN2-204ENST00000407704 MADDQ8WXG6 1647 aa32.88■■■□□ 2.85
ITSN2-204ENST00000407704 PTPRMP28827 1452 aa32.87■■■□□ 2.85
ITSN2-204ENST00000407704 ZMYM4Q5VZL5 1548 aa32.87■■■□□ 2.85
ITSN2-204ENST00000407704 SIGLEC1Q9BZZ2 1709 aa32.84■■■□□ 2.85
ITSN2-204ENST00000407704 TROQ12816 1431 aaPredicted RBP32.84■■■□□ 2.85
ITSN2-204ENST00000407704 SCAPERQ9BY12 1400 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms