RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 JPH4Q96JJ6 628 aa33.31■■■□□ 2.92
SMARCB1-204ENST00000407422 PRG4Q92954 1404 aaPredicted RBP33.3■■■□□ 2.92
SMARCB1-204ENST00000407422 CARMIL1Q5VZK9 1371 aa33.21■■■□□ 2.91
SMARCB1-204ENST00000407422 KIAA0586Q9BVV6 1533 aa33.18■■■□□ 2.9
SMARCB1-204ENST00000407422 RAPGEF2Q9Y4G8 1499 aa32.94■■■□□ 2.86
SMARCB1-204ENST00000407422 IQGAP2Q13576 1575 aa32.93■■■□□ 2.86
SMARCB1-204ENST00000407422 ADCY10Q96PN6 1610 aa32.89■■■□□ 2.86
SMARCB1-204ENST00000407422 TTBK1Q5TCY1 1321 aaPredicted RBP32.82■■■□□ 2.84
SMARCB1-204ENST00000407422 CARMIL2Q6F5E8 1435 aa32.82■■■□□ 2.84
SMARCB1-204ENST00000407422 PTPRGP23470 1445 aa32.81■■■□□ 2.84
SMARCB1-204ENST00000407422 KIF13AQ9H1H9 1805 aa32.81■■■□□ 2.84
SMARCB1-204ENST00000407422 NPM1P06748 294 aaKnown RBP eCLIP32.8■■■□□ 2.84
SMARCB1-204ENST00000407422 TNIKQ9UKE5 1360 aa32.78■■■□□ 2.84
SMARCB1-204ENST00000407422 DISP1Q96F81 1524 aa32.77■■■□□ 2.84
SMARCB1-204ENST00000407422 MAPKBP1O60336 1514 aa32.74■■■□□ 2.83
SMARCB1-204ENST00000407422 UGGT2Q9NYU1 1516 aa32.72■■■□□ 2.83
SMARCB1-204ENST00000407422 PRXQ9BXM0 1461 aa32.7■■■□□ 2.83
SMARCB1-204ENST00000407422 CTTNBP2Q8WZ74 1663 aa32.69■■■□□ 2.82
SMARCB1-204ENST00000407422 ABCC10Q5T3U5 1492 aa32.67■■■□□ 2.82
SMARCB1-204ENST00000407422 FAM69CQ0P6D2 419 aa32.65■■■□□ 2.82
SMARCB1-204ENST00000407422 KIAA0556O60303 1618 aa32.63■■■□□ 2.81
SMARCB1-204ENST00000407422 DIP2BQ9P265 1576 aa32.62■■■□□ 2.81
SMARCB1-204ENST00000407422 ABCC2Q92887 1545 aa32.59■■■□□ 2.81
SMARCB1-204ENST00000407422 UACAQ9BZF9 1416 aa32.57■■■□□ 2.81
SMARCB1-204ENST00000407422 UHRF1BP1LA0JNW5 1464 aa32.55■■■□□ 2.8
SMARCB1-204ENST00000407422 CSRNP3Q8WYN3 585 aa32.54■■■□□ 2.8
SMARCB1-204ENST00000407422 GOLGA3Q08378 1498 aa32.46■■■□□ 2.79
SMARCB1-204ENST00000407422 ASXL2Q76L83 1435 aa32.45■■■□□ 2.79
SMARCB1-204ENST00000407422 TSPOAP1O95153 1857 aa32.44■■■□□ 2.78
SMARCB1-204ENST00000407422 KDM5BQ9UGL1 1544 aa32.43■■■□□ 2.78
SMARCB1-204ENST00000407422 EEA1Q15075 1411 aa32.41■■■□□ 2.78
SMARCB1-204ENST00000407422 PLB1Q6P1J6 1458 aa32.41■■■□□ 2.78
SMARCB1-204ENST00000407422 FAM9AQ8IZU1 332 aaPredicted RBP32.39■■■□□ 2.78
SMARCB1-204ENST00000407422 ZCCHC11Q5TAX3 1644 aaKnown RBP32.39■■■□□ 2.78
SMARCB1-204ENST00000407422 ABCA8O94911 1581 aa32.31■■■□□ 2.76
SMARCB1-204ENST00000407422 GLI2P10070 1586 aa32.3■■■□□ 2.76
SMARCB1-204ENST00000407422 P3H3Q8IVL6 736 aa32.3■■■□□ 2.76
SMARCB1-204ENST00000407422 CHIC1Q5VXU3 224 aa32.28■■■□□ 2.76
SMARCB1-204ENST00000407422 EPRSP07814 1512 aaKnown RBP32.26■■■□□ 2.76
SMARCB1-204ENST00000407422 KDM6BO15054 1643 aa32.24■■■□□ 2.75
SMARCB1-204ENST00000407422 PPRC1Q5VV67 1664 aaKnown RBP32.24■■■□□ 2.75
SMARCB1-204ENST00000407422 SAMD9Q5K651 1589 aa32.23■■■□□ 2.75
SMARCB1-204ENST00000407422 WDR7Q9Y4E6 1490 aa32.19■■■□□ 2.74
SMARCB1-204ENST00000407422 KIF21BO75037 1637 aa32.18■■■□□ 2.74
SMARCB1-204ENST00000407422 MAP3K4Q9Y6R4 1608 aa32.17■■■□□ 2.74
SMARCB1-204ENST00000407422 RANGAP1P46060 587 aaPredicted RBP32.17■■■□□ 2.74
SMARCB1-204ENST00000407422 ARID3CA6NKF2 412 aa32.11■■■□□ 2.73
SMARCB1-204ENST00000407422 AEBP2Q6ZN18 517 aaPredicted RBP32.11■■■□□ 2.73
SMARCB1-204ENST00000407422 KCNH8Q96L42 1107 aa32.07■■■□□ 2.72
SMARCB1-204ENST00000407422 EHMT2Q96KQ7 1210 aa32.06■■■□□ 2.72
SMARCB1-204ENST00000407422 ATP10BO94823 1461 aa32.05■■■□□ 2.72
SMARCB1-204ENST00000407422 FHOD3Q2V2M9 1422 aa32.04■■■□□ 2.72
SMARCB1-204ENST00000407422 RAPGEF6Q8TEU7 1601 aa32.03■■■□□ 2.72
SMARCB1-204ENST00000407422 TEX14Q8IWB6 1497 aa32.01■■■□□ 2.71
SMARCB1-204ENST00000407422 COL17A1Q9UMD9 1497 aaPredicted RBP31.99■■■□□ 2.71
SMARCB1-204ENST00000407422 CFAP43Q8NDM7 1665 aa31.97■■■□□ 2.71
SMARCB1-204ENST00000407422 CD109Q6YHK3 1445 aa31.96■■■□□ 2.71
SMARCB1-204ENST00000407422 UBTFP17480 764 aaKnown RBP31.94■■■□□ 2.7
SMARCB1-204ENST00000407422 EFCAB5A4FU69 1503 aa31.94■■■□□ 2.7
SMARCB1-204ENST00000407422 NUP153P49790 1475 aaKnown RBP31.92■■■□□ 2.7
SMARCB1-204ENST00000407422 MAGI3Q5TCQ9 1506 aa31.9■■■□□ 2.7
SMARCB1-204ENST00000407422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.87■■■□□ 2.69
SMARCB1-204ENST00000407422 HNRNPUL2Q1KMD3 747 aaKnown RBP31.87■■■□□ 2.69
SMARCB1-204ENST00000407422 ABCA9Q8IUA7 1624 aa31.8■■■□□ 2.68
SMARCB1-204ENST00000407422 KDM4FA0A1W2PPD8 638 aa31.79■■■□□ 2.68
SMARCB1-204ENST00000407422 ARHGAP35Q9NRY4 1499 aa31.76■■■□□ 2.68
SMARCB1-204ENST00000407422 PLEKHD1A6NEE1 506 aa31.69■■■□□ 2.66
SMARCB1-204ENST00000407422 CDK13Q14004 1512 aaKnown RBP31.67■■■□□ 2.66
SMARCB1-204ENST00000407422 FMN1Q68DA7 1419 aa31.65■■■□□ 2.66
SMARCB1-204ENST00000407422 ARAP3Q8WWN8 1544 aa31.65■■■□□ 2.66
SMARCB1-204ENST00000407422 ATP1B4Q9UN42 357 aaPredicted RBP31.61■■■□□ 2.65
SMARCB1-204ENST00000407422 ADGRL1O94910 1474 aa31.61■■■□□ 2.65
SMARCB1-204ENST00000407422 HECW1Q76N89 1606 aa31.58■■■□□ 2.65
SMARCB1-204ENST00000407422 PHLDB1Q86UU1 1377 aa31.58■■■□□ 2.65
SMARCB1-204ENST00000407422 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.57■■■□□ 2.643e-6■■■□□ 15.2
SMARCB1-204ENST00000407422 NEO1Q92859 1461 aa31.57■■■□□ 2.64
SMARCB1-204ENST00000407422 TTC37Q6PGP7 1564 aa31.54■■■□□ 2.64
SMARCB1-204ENST00000407422 RAPGEF3O95398 923 aa31.53■■■□□ 2.64
SMARCB1-204ENST00000407422 LRRIQ1Q96JM4 1722 aa31.49■■■□□ 2.63
SMARCB1-204ENST00000407422 FRMPD1Q5SYB0 1578 aa31.45■■■□□ 2.63
SMARCB1-204ENST00000407422 FANCAO15360 1455 aa31.44■■■□□ 2.62
SMARCB1-204ENST00000407422 AKNAQ7Z591 1439 aa31.42■■■□□ 2.62
SMARCB1-204ENST00000407422 PCF11O94913 1555 aaKnown RBP31.4■■■□□ 2.62
SMARCB1-204ENST00000407422 CFAP74Q9C0B2 1584 aa31.4■■■□□ 2.62
SMARCB1-204ENST00000407422 CDK11AQ9UQ88 783 aaPredicted RBP31.4■■■□□ 2.62
SMARCB1-204ENST00000407422 KIF14Q15058 1648 aa31.38■■■□□ 2.61
SMARCB1-204ENST00000407422 RICTORQ6R327 1708 aa31.37■■■□□ 2.61
SMARCB1-204ENST00000407422 CLIP1P30622 1438 aa31.37■■■□□ 2.61
SMARCB1-204ENST00000407422 CASKIN1Q8WXD9 1431 aa31.37■■■□□ 2.61
SMARCB1-204ENST00000407422 DENND4BO75064 1496 aaPredicted RBP31.36■■■□□ 2.61
SMARCB1-204ENST00000407422 PLCH2O75038 1416 aa31.35■■■□□ 2.61
SMARCB1-204ENST00000407422 TROQ12816 1431 aaPredicted RBP31.35■■■□□ 2.61
SMARCB1-204ENST00000407422 MYO5CQ9NQX4 1742 aa31.32■■■□□ 2.6
SMARCB1-204ENST00000407422 CCDC18Q5T9S5 1454 aa31.27■■■□□ 2.6
SMARCB1-204ENST00000407422 FYCO1Q9BQS8 1478 aa31.25■■■□□ 2.59
SMARCB1-204ENST00000407422 SCAPERQ9BY12 1400 aa31.23■■■□□ 2.59
SMARCB1-204ENST00000407422 ARHGEF40Q8TER5 1519 aa31.23■■■□□ 2.59
SMARCB1-204ENST00000407422 EFCAB2Q5VUJ9 269 aa31.22■■■□□ 2.59
SMARCB1-204ENST00000407422 ZMYM4Q5VZL5 1548 aa31.21■■■□□ 2.59
SMARCB1-204ENST00000407422 POGZQ7Z3K3 1410 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms