RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 IPO9Q96P70 1041 aaKnown RBP12.26□□□□□ -0.45
PSEN1-205ENST00000406768 SMARCA2P51531 1590 aa12.24□□□□□ -0.45
PSEN1-205ENST00000406768 CNGB1Q14028 1251 aaPredicted RBP12.23□□□□□ -0.45
PSEN1-205ENST00000406768 KCNH8Q96L42 1107 aa12.23□□□□□ -0.45
PSEN1-205ENST00000406768 USP35Q9P2H5 1018 aa12.22□□□□□ -0.45
PSEN1-205ENST00000406768 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
PSEN1-205ENST00000406768 HSP90AA1P07900 732 aaKnown RBP12.2□□□□□ -0.46
PSEN1-205ENST00000406768 DDRGK1Q96HY6 314 aa12.2□□□□□ -0.46
PSEN1-205ENST00000406768 PABPN1Q86U42 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
PSEN1-205ENST00000406768 HSP90AA2PQ14568 343 aaPredicted RBP12.19□□□□□ -0.46
PSEN1-205ENST00000406768 CCER2I3L3R5 266 aa12.18□□□□□ -0.46
PSEN1-205ENST00000406768 FAM9BQ8IZU0 186 aa12.18□□□□□ -0.46
PSEN1-205ENST00000406768 ARXQ96QS3 562 aa12.17□□□□□ -0.46
PSEN1-205ENST00000406768 WIZO95785 1651 aa12.17□□□□□ -0.46
PSEN1-205ENST00000406768 POLR3GLQ9BT43 218 aa12.15□□□□□ -0.47
PSEN1-205ENST00000406768 EIF4G1Q04637 1599 aaKnown RBP12.14□□□□□ -0.47
PSEN1-205ENST00000406768 HIRIP3Q9BW71 556 aaPredicted RBP12.14□□□□□ -0.47
PSEN1-205ENST00000406768 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
PSEN1-205ENST00000406768 A0A0U1RQG5 324 aaPredicted RBP12.13□□□□□ -0.47
PSEN1-205ENST00000406768 PAK3O75914 559 aaPredicted RBP12.13□□□□□ -0.47
PSEN1-205ENST00000406768 GSE1Q14687 1217 aa12.12□□□□□ -0.47
PSEN1-205ENST00000406768 PNNQ9H307 717 aaKnown RBP12.12□□□□□ -0.47
PSEN1-205ENST00000406768 CEP162Q5TB80 1403 aa12.11□□□□□ -0.47
PSEN1-205ENST00000406768 ATAD2BQ9ULI0 1458 aa12.11□□□□□ -0.47
PSEN1-205ENST00000406768 BRPF3Q9ULD4 1205 aa12.1□□□□□ -0.47
PSEN1-205ENST00000406768 ATP1B4Q9UN42 357 aaPredicted RBP12.1□□□□□ -0.47
PSEN1-205ENST00000406768 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
PSEN1-205ENST00000406768 MRS2Q9HD23 443 aa12.07□□□□□ -0.48
PSEN1-205ENST00000406768 BAZ1BQ9UIG0 1483 aaKnown RBP12.07□□□□□ -0.48
PSEN1-205ENST00000406768 ZMYND15Q9H091 742 aa12.06□□□□□ -0.48
PSEN1-205ENST00000406768 TNNT2P45379 298 aaPredicted RBP12.06□□□□□ -0.48
PSEN1-205ENST00000406768 TRIM44Q96DX7 344 aaPredicted RBP12.05□□□□□ -0.48
PSEN1-205ENST00000406768 ANP32BQ92688 251 aaKnown RBP12.04□□□□□ -0.48
PSEN1-205ENST00000406768 ARID4BQ4LE39 1312 aaPredicted RBP12.04□□□□□ -0.48
PSEN1-205ENST00000406768 L1TD1Q5T7N2 865 aaKnown RBP12.04□□□□□ -0.48
PSEN1-205ENST00000406768 FAM50AQ14320 339 aaKnown RBP12.03□□□□□ -0.48
PSEN1-205ENST00000406768 PLEKHG5O94827 1062 aa12.02□□□□□ -0.48
PSEN1-205ENST00000406768 NCLP19338 710 aaKnown RBP12□□□□□ -0.49
PSEN1-205ENST00000406768 TONSLQ96HA7 1378 aa12□□□□□ -0.49
PSEN1-205ENST00000406768 FAM43AQ8N2R8 423 aa11.99□□□□□ -0.49
PSEN1-205ENST00000406768 TNIKQ9UKE5 1360 aa11.97□□□□□ -0.49
PSEN1-205ENST00000406768 TCERG1O14776 1098 aaKnown RBP11.96□□□□□ -0.5
PSEN1-205ENST00000406768 CCDC88BA6NC98 1476 aa11.96□□□□□ -0.5
PSEN1-205ENST00000406768 DNAJC5BQ9UF47 199 aa11.95□□□□□ -0.5
PSEN1-205ENST00000406768 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
PSEN1-205ENST00000406768 RRP9O43818 475 aaKnown RBP11.94□□□□□ -0.5
PSEN1-205ENST00000406768 CC2D2AQ9P2K1 1620 aa11.93□□□□□ -0.5
PSEN1-205ENST00000406768 BECN1Q14457 450 aa11.93□□□□□ -0.5
PSEN1-205ENST00000406768 FRAT1Q92837 279 aaPredicted RBP11.93□□□□□ -0.5
PSEN1-205ENST00000406768 EEA1Q15075 1411 aa11.92□□□□□ -0.5
PSEN1-205ENST00000406768 CDK11BP21127 795 aaKnown RBP11.91□□□□□ -0.5
PSEN1-205ENST00000406768 UPF2Q9HAU5 1272 aaKnown RBP11.91□□□□□ -0.5
PSEN1-205ENST00000406768 C11orf95C9JLR9 678 aaPredicted RBP11.9□□□□□ -0.5
PSEN1-205ENST00000406768 NFKBIBQ15653 356 aa11.9□□□□□ -0.51
PSEN1-205ENST00000406768 CLIP1P30622 1438 aa11.88□□□□□ -0.51
PSEN1-205ENST00000406768 DHX57Q6P158 1386 aaKnown RBP11.88□□□□□ -0.51
PSEN1-205ENST00000406768 SIN3AQ96ST3 1273 aa11.88□□□□□ -0.51
PSEN1-205ENST00000406768 PDE4AP27815 886 aa11.88□□□□□ -0.51
PSEN1-205ENST00000406768 PDE4CQ08493 712 aa11.88□□□□□ -0.51
PSEN1-205ENST00000406768 TMC1Q8TDI8 760 aa11.86□□□□□ -0.51
PSEN1-205ENST00000406768 PRDM2Q13029 1718 aa11.85□□□□□ -0.51
PSEN1-205ENST00000406768 GOLGA6L3A6NEY3 463 aa11.84□□□□□ -0.51
PSEN1-205ENST00000406768 SLC4A3P48751 1232 aa11.83□□□□□ -0.52
PSEN1-205ENST00000406768 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
PSEN1-205ENST00000406768 ARID3AQ99856 593 aa11.82□□□□□ -0.52
PSEN1-205ENST00000406768 EIF4G2P78344 907 aaKnown RBP eCLIP11.81□□□□□ -0.52
PSEN1-205ENST00000406768 GOLGA3Q08378 1498 aa11.81□□□□□ -0.52
PSEN1-205ENST00000406768 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
PSEN1-205ENST00000406768 WASHC2AQ641Q2 1341 aa11.81□□□□□ -0.52
PSEN1-205ENST00000406768 MYH16Q9H6N6 1097 aa11.8□□□□□ -0.52
PSEN1-205ENST00000406768 MSNP26038 577 aaKnown RBP11.79□□□□□ -0.52
PSEN1-205ENST00000406768 GZF1Q9H116 711 aaPredicted RBP11.79□□□□□ -0.52
PSEN1-205ENST00000406768 NUDCQ9Y266 331 aa11.78□□□□□ -0.52
PSEN1-205ENST00000406768 PPP1R15AO75807 674 aaPredicted RBP11.78□□□□□ -0.52
PSEN1-205ENST00000406768 WASHC2CQ9Y4E1 1318 aa11.78□□□□□ -0.52
PSEN1-205ENST00000406768 CFTRP13569 1480 aa11.77□□□□□ -0.52
PSEN1-205ENST00000406768 MS4A1P11836 297 aa11.77□□□□□ -0.53
PSEN1-205ENST00000406768 RBM10P98175 930 aaKnown RBP11.77□□□□□ -0.53
PSEN1-205ENST00000406768 RGS3P49796 1198 aa11.76□□□□□ -0.53
PSEN1-205ENST00000406768 ZBED9Q6R2W3 1325 aa11.76□□□□□ -0.53
PSEN1-205ENST00000406768 SLKQ9H2G2 1235 aaPredicted RBP11.76□□□□□ -0.53
PSEN1-205ENST00000406768 CANXP27824 592 aaKnown RBP11.74□□□□□ -0.53
PSEN1-205ENST00000406768 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-205ENST00000406768 FRAT2O75474 233 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-205ENST00000406768 TPM2P07951 284 aa11.74□□□□□ -0.53
PSEN1-205ENST00000406768 LAMC3Q9Y6N6 1575 aa11.73□□□□□ -0.53
PSEN1-205ENST00000406768 DNTTIP2Q5QJE6 756 aaKnown RBP11.73□□□□□ -0.53
PSEN1-205ENST00000406768 FAM13BQ9NYF5 915 aa11.72□□□□□ -0.53
PSEN1-205ENST00000406768 ZNF326Q5BKZ1 582 aaKnown RBP11.72□□□□□ -0.53
PSEN1-205ENST00000406768 CADPSQ9ULU8 1353 aa11.72□□□□□ -0.53
PSEN1-205ENST00000406768 MAP7D2Q96T17 732 aa11.71□□□□□ -0.53
PSEN1-205ENST00000406768 VPS8Q8N3P4 1428 aa11.7□□□□□ -0.54
PSEN1-205ENST00000406768 CCNB3Q8WWL7 1395 aa11.7□□□□□ -0.54
PSEN1-205ENST00000406768 PDCL3Q9H2J4 239 aa11.69□□□□□ -0.54
PSEN1-205ENST00000406768 GOLGA6L22H0YM25 854 aa11.69□□□□□ -0.54
PSEN1-205ENST00000406768 BACH2Q9BYV9 841 aa11.68□□□□□ -0.54
PSEN1-205ENST00000406768 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
PSEN1-205ENST00000406768 RCAN3Q9UKA8 241 aa11.67□□□□□ -0.54
PSEN1-205ENST00000406768 RAB3GAP2Q9H2M9 1393 aa11.67□□□□□ -0.54
PSEN1-205ENST00000406768 PDIA4P13667 645 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms