RNA–Protein interactions for RNA: ENST00000405957.6

LSP1-203, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LSP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-203ENST00000405957 ARHGAP35Q9NRY4 1499 aa26.59■■□□□ 1.85
LSP1-203ENST00000405957 PPARGC1BQ86YN6 1023 aaKnown RBP26.59■■□□□ 1.85
LSP1-203ENST00000405957 ADAMTS12P58397 1594 aa26.58■■□□□ 1.85
LSP1-203ENST00000405957 MAGI1Q96QZ7 1491 aaPredicted RBP26.56■■□□□ 1.84
LSP1-203ENST00000405957 RANGAP1P46060 587 aaPredicted RBP26.55■■□□□ 1.84
LSP1-203ENST00000405957 FHAD1B1AJZ9 1412 aa26.54■■□□□ 1.84
LSP1-203ENST00000405957 SYNJ2O15056 1496 aa26.46■■□□□ 1.83
LSP1-203ENST00000405957 EFCAB5A4FU69 1503 aa26.45■■□□□ 1.83
LSP1-203ENST00000405957 FBLN2P98095 1184 aa26.41■■□□□ 1.82
LSP1-203ENST00000405957 APLP2Q06481 763 aa26.41■■□□□ 1.82
LSP1-203ENST00000405957 CHMP7Q8WUX9 453 aaPredicted RBP26.41■■□□□ 1.82
LSP1-203ENST00000405957 GRIN2AQ12879 1464 aa26.4■■□□□ 1.82
LSP1-203ENST00000405957 CHD1O14646 1710 aa26.37■■□□□ 1.81
LSP1-203ENST00000405957 TTBK1Q5TCY1 1321 aaPredicted RBP26.34■■□□□ 1.81
LSP1-203ENST00000405957 SAMD9Q5K651 1589 aa26.31■■□□□ 1.8
LSP1-203ENST00000405957 MAP3K1Q13233 1512 aa26.29■■□□□ 1.8
LSP1-203ENST00000405957 CEP170Q5SW79 1584 aa26.26■■□□□ 1.79
LSP1-203ENST00000405957 PCF11O94913 1555 aaKnown RBP26.25■■□□□ 1.79
LSP1-203ENST00000405957 TIAM1Q13009 1591 aa26.23■■□□□ 1.79
LSP1-203ENST00000405957 CFAP43Q8NDM7 1665 aa26.23■■□□□ 1.79
LSP1-203ENST00000405957 NUP160Q12769 1436 aa26.23■■□□□ 1.79
LSP1-203ENST00000405957 FHOD3Q2V2M9 1422 aa26.22■■□□□ 1.79
LSP1-203ENST00000405957 IQGAP2Q13576 1575 aa26.21■■□□□ 1.79
LSP1-203ENST00000405957 FYCO1Q9BQS8 1478 aa26.2■■□□□ 1.78
LSP1-203ENST00000405957 KIAA0586Q9BVV6 1533 aa26.17■■□□□ 1.78
LSP1-203ENST00000405957 FMN1Q68DA7 1419 aa26.16■■□□□ 1.78
LSP1-203ENST00000405957 CASKIN1Q8WXD9 1431 aa26.14■■□□□ 1.77
LSP1-203ENST00000405957 KANK4Q5T7N3 995 aaPredicted RBP26.11■■□□□ 1.77
LSP1-203ENST00000405957 P3H3Q8IVL6 736 aa26.1■■□□□ 1.77
LSP1-203ENST00000405957 UGGT2Q9NYU1 1516 aa26.08■■□□□ 1.76
LSP1-203ENST00000405957 LRRC9Q6ZRR7 1453 aa26.06■■□□□ 1.76
LSP1-203ENST00000405957 CLASP1Q7Z460 1538 aa26.05■■□□□ 1.76
LSP1-203ENST00000405957 OSCARQ8IYS5 282 aa26.03■■□□□ 1.76
LSP1-203ENST00000405957 CCER1Q8TC90 406 aaPredicted RBP26.03■■□□□ 1.76
LSP1-203ENST00000405957 RRBP1Q9P2E9 1410 aaKnown RBP26.02■■□□□ 1.76
LSP1-203ENST00000405957 JPH4Q96JJ6 628 aa25.99■■□□□ 1.75
LSP1-203ENST00000405957 LRRIQ1Q96JM4 1722 aa25.98■■□□□ 1.75
LSP1-203ENST00000405957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.97■■□□□ 1.75
LSP1-203ENST00000405957 SHROOM2Q13796 1616 aa25.95■■□□□ 1.75
LSP1-203ENST00000405957 KIAA0556O60303 1618 aa25.95■■□□□ 1.74
LSP1-203ENST00000405957 DISP1Q96F81 1524 aa25.92■■□□□ 1.74
LSP1-203ENST00000405957 HECW1Q76N89 1606 aa25.92■■□□□ 1.74
LSP1-203ENST00000405957 PRG4Q92954 1404 aaPredicted RBP25.89■■□□□ 1.73
LSP1-203ENST00000405957 CCNB3Q8WWL7 1395 aa25.88■■□□□ 1.73
LSP1-203ENST00000405957 CCDC18Q5T9S5 1454 aa25.87■■□□□ 1.73
LSP1-203ENST00000405957 ATP1B4Q9UN42 357 aaPredicted RBP25.85■■□□□ 1.73
LSP1-203ENST00000405957 CARMIL2Q6F5E8 1435 aa25.85■■□□□ 1.73
LSP1-203ENST00000405957 HNRNPUL2Q1KMD3 747 aaKnown RBP25.84■■□□□ 1.73
LSP1-203ENST00000405957 ERCC6L2Q5T890 1561 aa25.82■■□□□ 1.72
LSP1-203ENST00000405957 EHBP1L1Q8N3D4 1523 aa25.81■■□□□ 1.72
LSP1-203ENST00000405957 PHLDB1Q86UU1 1377 aa25.8■■□□□ 1.72
LSP1-203ENST00000405957 SUPT6HQ7KZ85 1726 aaKnown RBP25.77■■□□□ 1.72
LSP1-203ENST00000405957 MTUS2Q5JR59 1369 aa25.75■■□□□ 1.71
LSP1-203ENST00000405957 EPRSP07814 1512 aaKnown RBP25.75■■□□□ 1.71
LSP1-203ENST00000405957 RAPGEF6Q8TEU7 1601 aa25.73■■□□□ 1.71
LSP1-203ENST00000405957 MAGI3Q5TCQ9 1506 aa25.69■■□□□ 1.7
LSP1-203ENST00000405957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.68■■□□□ 1.7
LSP1-203ENST00000405957 ARHGEF11O15085 1522 aa25.67■■□□□ 1.7
LSP1-203ENST00000405957 NCOA2Q15596 1464 aa25.67■■□□□ 1.7
LSP1-203ENST00000405957 PTPRGP23470 1445 aa25.66■■□□□ 1.7
LSP1-203ENST00000405957 CDK13Q14004 1512 aaKnown RBP25.66■■□□□ 1.7
LSP1-203ENST00000405957 FGD6Q6ZV73 1430 aa25.64■■□□□ 1.69
LSP1-203ENST00000405957 NUP153P49790 1475 aaKnown RBP25.63■■□□□ 1.69
LSP1-203ENST00000405957 CLSPNQ9HAW4 1339 aa25.62■■□□□ 1.69
LSP1-203ENST00000405957 MYOM3Q5VTT5 1437 aa25.6■■□□□ 1.69
LSP1-203ENST00000405957 PLB1Q6P1J6 1458 aa25.59■■□□□ 1.69
LSP1-203ENST00000405957 RIMBP3CA6NJZ7 1639 aa25.57■■□□□ 1.68
LSP1-203ENST00000405957 RIMBP3BA6NNM3 1639 aa25.57■■□□□ 1.68
LSP1-203ENST00000405957 RIMBP3Q9UFD9 1639 aa25.57■■□□□ 1.68
LSP1-203ENST00000405957 ABCA8O94911 1581 aa25.55■■□□□ 1.68
LSP1-203ENST00000405957 FAM50AQ14320 339 aaKnown RBP25.52■■□□□ 1.68
LSP1-203ENST00000405957 PTPN23Q9H3S7 1636 aa25.51■■□□□ 1.67
LSP1-203ENST00000405957 UACAQ9BZF9 1416 aa25.51■■□□□ 1.67
LSP1-203ENST00000405957 ITGAEP38570 1179 aa25.49■■□□□ 1.67
LSP1-203ENST00000405957 DHX57Q6P158 1386 aaKnown RBP25.47■■□□□ 1.67
LSP1-203ENST00000405957 TCOF1Q13428 1488 aaKnown RBP25.47■■□□□ 1.67
LSP1-203ENST00000405957 ADCY10Q96PN6 1610 aa25.46■■□□□ 1.67
LSP1-203ENST00000405957 ABCC2Q92887 1545 aa25.46■■□□□ 1.67
LSP1-203ENST00000405957 ARID3CA6NKF2 412 aa25.46■■□□□ 1.67
LSP1-203ENST00000405957 SETD5Q9C0A6 1442 aa25.44■■□□□ 1.66
LSP1-203ENST00000405957 MIA2Q96PC5 1412 aa25.43■■□□□ 1.66
LSP1-203ENST00000405957 RAB3GAP2Q9H2M9 1393 aa25.42■■□□□ 1.66
LSP1-203ENST00000405957 UHRF1BP1LA0JNW5 1464 aa25.41■■□□□ 1.66
LSP1-203ENST00000405957 CDK11AQ9UQ88 783 aaPredicted RBP25.41■■□□□ 1.66
LSP1-203ENST00000405957 TROQ12816 1431 aaPredicted RBP25.41■■□□□ 1.66
LSP1-203ENST00000405957 CYB5RLQ6IPT4 315 aa25.38■■□□□ 1.65
LSP1-203ENST00000405957 ITSN2Q9NZM3 1697 aa25.37■■□□□ 1.65
LSP1-203ENST00000405957 ATP10BO94823 1461 aa25.36■■□□□ 1.65
LSP1-203ENST00000405957 KIF14Q15058 1648 aa25.32■■□□□ 1.64
LSP1-203ENST00000405957 KDM5BQ9UGL1 1544 aa25.31■■□□□ 1.64
LSP1-203ENST00000405957 HFM1A2PYH4 1435 aa25.31■■□□□ 1.64
LSP1-203ENST00000405957 PTPRKQ15262 1439 aa25.31■■□□□ 1.64
LSP1-203ENST00000405957 ZCCHC11Q5TAX3 1644 aaKnown RBP25.31■■□□□ 1.64
LSP1-203ENST00000405957 DNAJC5Q9H3Z4 198 aa25.3■■□□□ 1.64
LSP1-203ENST00000405957 GCC2Q8IWJ2 1684 aa25.28■■□□□ 1.64
LSP1-203ENST00000405957 AKNAQ7Z591 1439 aa25.26■■□□□ 1.63
LSP1-203ENST00000405957 ZNF316A6NFI3 1004 aaPredicted RBP25.26■■□□□ 1.63
LSP1-203ENST00000405957 DNMT1P26358 1616 aaKnown RBP25.24■■□□□ 1.63
LSP1-203ENST00000405957 MAPKBP1O60336 1514 aa25.24■■□□□ 1.63
LSP1-203ENST00000405957 NAIPQ13075 1403 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms