RNA–Protein interactions for RNA: ENST00000405598.5

CHEK2-209, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CHEK2, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-209ENST00000405598 GRIN2AQ12879 1464 aa16.52■□□□□ 0.23
CHEK2-209ENST00000405598 SYNJ2O15056 1496 aa16.51■□□□□ 0.23
CHEK2-209ENST00000405598 CHD1O14646 1710 aa16.5■□□□□ 0.23
CHEK2-209ENST00000405598 CHMP7Q8WUX9 453 aaPredicted RBP16.48■□□□□ 0.23
CHEK2-209ENST00000405598 CEP170Q5SW79 1584 aa16.48■□□□□ 0.23
CHEK2-209ENST00000405598 ARHGAP35Q9NRY4 1499 aa16.47■□□□□ 0.23
CHEK2-209ENST00000405598 ARAP1Q96P48 1450 aa16.46■□□□□ 0.22
CHEK2-209ENST00000405598 P3H3Q8IVL6 736 aa16.44■□□□□ 0.22
CHEK2-209ENST00000405598 IQGAP2Q13576 1575 aa16.42■□□□□ 0.22
CHEK2-209ENST00000405598 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
CHEK2-209ENST00000405598 NUP160Q12769 1436 aa16.39■□□□□ 0.21
CHEK2-209ENST00000405598 FHOD3Q2V2M9 1422 aa16.38■□□□□ 0.21
CHEK2-209ENST00000405598 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
CHEK2-209ENST00000405598 KIAA0586Q9BVV6 1533 aa16.36■□□□□ 0.21
CHEK2-209ENST00000405598 SAMD9Q5K651 1589 aa16.36■□□□□ 0.21
CHEK2-209ENST00000405598 VPS8Q8N3P4 1428 aa16.35■□□□□ 0.21
CHEK2-209ENST00000405598 EFCAB5A4FU69 1503 aa16.32■□□□□ 0.2
CHEK2-209ENST00000405598 TTBK1Q5TCY1 1321 aaPredicted RBP16.31■□□□□ 0.2
CHEK2-209ENST00000405598 UGGT2Q9NYU1 1516 aa16.31■□□□□ 0.2
CHEK2-209ENST00000405598 DISP1Q96F81 1524 aa16.3■□□□□ 0.2
CHEK2-209ENST00000405598 PCF11O94913 1555 aaKnown RBP16.27■□□□□ 0.2
CHEK2-209ENST00000405598 KIAA0556O60303 1618 aa16.27■□□□□ 0.2
CHEK2-209ENST00000405598 JPH4Q96JJ6 628 aa16.25■□□□□ 0.19
CHEK2-209ENST00000405598 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
CHEK2-209ENST00000405598 ERCC6L2Q5T890 1561 aa16.24■□□□□ 0.19
CHEK2-209ENST00000405598 LRRIQ1Q96JM4 1722 aa16.21■□□□□ 0.19
CHEK2-209ENST00000405598 SHROOM2Q13796 1616 aa16.21■□□□□ 0.19
CHEK2-209ENST00000405598 RIMBP3CA6NJZ7 1639 aa16.2■□□□□ 0.18
CHEK2-209ENST00000405598 RIMBP3BA6NNM3 1639 aa16.2■□□□□ 0.18
CHEK2-209ENST00000405598 RIMBP3Q9UFD9 1639 aa16.2■□□□□ 0.18
CHEK2-209ENST00000405598 ATP1B4Q9UN42 357 aaPredicted RBP16.2■□□□□ 0.18
CHEK2-209ENST00000405598 PRG4Q92954 1404 aaPredicted RBP16.2■□□□□ 0.18
CHEK2-209ENST00000405598 ARHGEF11O15085 1522 aa16.16■□□□□ 0.18
CHEK2-209ENST00000405598 KANK4Q5T7N3 995 aaPredicted RBP16.16■□□□□ 0.18
CHEK2-209ENST00000405598 FMN1Q68DA7 1419 aa16.16■□□□□ 0.18
CHEK2-209ENST00000405598 ARID3CA6NKF2 412 aa16.15■□□□□ 0.18
CHEK2-209ENST00000405598 CASKIN1Q8WXD9 1431 aa16.14■□□□□ 0.17
CHEK2-209ENST00000405598 FYCO1Q9BQS8 1478 aa16.14■□□□□ 0.17
CHEK2-209ENST00000405598 CARMIL2Q6F5E8 1435 aa16.13■□□□□ 0.17
CHEK2-209ENST00000405598 TIAM1Q13009 1591 aa16.12■□□□□ 0.17
CHEK2-209ENST00000405598 PLB1Q6P1J6 1458 aa16.12■□□□□ 0.17
CHEK2-209ENST00000405598 CFAP43Q8NDM7 1665 aa16.11■□□□□ 0.17
CHEK2-209ENST00000405598 APLP2Q06481 763 aa16.11■□□□□ 0.17
CHEK2-209ENST00000405598 CDK13Q14004 1512 aaKnown RBP16.09■□□□□ 0.17
CHEK2-209ENST00000405598 RAPGEF6Q8TEU7 1601 aa16.09■□□□□ 0.17
CHEK2-209ENST00000405598 PCGF6Q9BYE7 350 aa16.08■□□□□ 0.16
CHEK2-209ENST00000405598 CYB5RLQ6IPT4 315 aa16.07■□□□□ 0.16
CHEK2-209ENST00000405598 HECW1Q76N89 1606 aa16.07■□□□□ 0.16
CHEK2-209ENST00000405598 NUP153P49790 1475 aaKnown RBP16.06■□□□□ 0.16
CHEK2-209ENST00000405598 MAGI3Q5TCQ9 1506 aa16.04■□□□□ 0.16
CHEK2-209ENST00000405598 PTPRGP23470 1445 aa16.04■□□□□ 0.16
CHEK2-209ENST00000405598 ABCA8O94911 1581 aa16.04■□□□□ 0.16
CHEK2-209ENST00000405598 EPRSP07814 1512 aaKnown RBP16.04■□□□□ 0.16
CHEK2-209ENST00000405598 LRRC9Q6ZRR7 1453 aa16.03■□□□□ 0.16
CHEK2-209ENST00000405598 MAP3K1Q13233 1512 aa16.02■□□□□ 0.15
CHEK2-209ENST00000405598 TRIM26Q12899 539 aaPredicted RBP16.02■□□□□ 0.15
CHEK2-209ENST00000405598 HRCP23327 699 aa15.97■□□□□ 0.15
CHEK2-209ENST00000405598 CCDC18Q5T9S5 1454 aa15.97■□□□□ 0.15
CHEK2-209ENST00000405598 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
CHEK2-209ENST00000405598 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
CHEK2-209ENST00000405598 UACAQ9BZF9 1416 aa15.94■□□□□ 0.14
CHEK2-209ENST00000405598 MTUS2Q5JR59 1369 aa15.94■□□□□ 0.14
CHEK2-209ENST00000405598 ATP10BO94823 1461 aa15.93■□□□□ 0.14
CHEK2-209ENST00000405598 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
CHEK2-209ENST00000405598 ABCC2Q92887 1545 aa15.92■□□□□ 0.14
CHEK2-209ENST00000405598 ADCY10Q96PN6 1610 aa15.91■□□□□ 0.14
CHEK2-209ENST00000405598 EHBP1L1Q8N3D4 1523 aa15.91■□□□□ 0.14
CHEK2-209ENST00000405598 NCOA2Q15596 1464 aa15.88■□□□□ 0.13
CHEK2-209ENST00000405598 SUPT6HQ7KZ85 1726 aaKnown RBP15.88■□□□□ 0.13
CHEK2-209ENST00000405598 KIF14Q15058 1648 aa15.88■□□□□ 0.13
CHEK2-209ENST00000405598 ZCCHC11Q5TAX3 1644 aaKnown RBP15.87■□□□□ 0.13
CHEK2-209ENST00000405598 UHRF1BP1LA0JNW5 1464 aa15.83■□□□□ 0.12
CHEK2-209ENST00000405598 TROQ12816 1431 aaPredicted RBP15.83■□□□□ 0.12
CHEK2-209ENST00000405598 RRBP1Q9P2E9 1410 aaKnown RBP15.82■□□□□ 0.12
CHEK2-209ENST00000405598 KDM5BQ9UGL1 1544 aa15.81■□□□□ 0.12
CHEK2-209ENST00000405598 CCNB3Q8WWL7 1395 aa15.79■□□□□ 0.12
CHEK2-209ENST00000405598 PLEKHD1A6NEE1 506 aa15.78■□□□□ 0.12
CHEK2-209ENST00000405598 TRHP20396 242 aaPredicted RBP15.78■□□□□ 0.12
CHEK2-209ENST00000405598 CDK11AQ9UQ88 783 aaPredicted RBP15.78■□□□□ 0.12
CHEK2-209ENST00000405598 MYOM3Q5VTT5 1437 aa15.77■□□□□ 0.12
CHEK2-209ENST00000405598 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.12
CHEK2-209ENST00000405598 ITGAEP38570 1179 aa15.77■□□□□ 0.12
CHEK2-209ENST00000405598 FAM50AQ14320 339 aaKnown RBP15.76■□□□□ 0.11
CHEK2-209ENST00000405598 TTC37Q6PGP7 1564 aa15.75■□□□□ 0.11
CHEK2-209ENST00000405598 KCNH8Q96L42 1107 aa15.75■□□□□ 0.11
CHEK2-209ENST00000405598 CDC42BPAQ5VT25 1732 aa15.74■□□□□ 0.11
CHEK2-209ENST00000405598 ABCC10Q5T3U5 1492 aa15.74■□□□□ 0.11
CHEK2-209ENST00000405598 PTPN23Q9H3S7 1636 aa15.73■□□□□ 0.11
CHEK2-209ENST00000405598 ZNF644Q9H582 1327 aaPredicted RBP15.72■□□□□ 0.11
CHEK2-209ENST00000405598 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.71■□□□□ 0.11
CHEK2-209ENST00000405598 GPATCH8Q9UKJ3 1502 aaKnown RBP15.71■□□□□ 0.11
CHEK2-209ENST00000405598 ASXL2Q76L83 1435 aa15.69■□□□□ 0.1
CHEK2-209ENST00000405598 ITSN2Q9NZM3 1697 aa15.68■□□□□ 0.1
CHEK2-209ENST00000405598 CDC42BPBQ9Y5S2 1711 aa15.68■□□□□ 0.1
CHEK2-209ENST00000405598 WDR7Q9Y4E6 1490 aa15.68■□□□□ 0.1
CHEK2-209ENST00000405598 PTPRKQ15262 1439 aa15.67■□□□□ 0.1
CHEK2-209ENST00000405598 ZNF777Q9ULD5 760 aaPredicted RBP15.66■□□□□ 0.1
CHEK2-209ENST00000405598 TCOF1Q13428 1488 aaKnown RBP15.65■□□□□ 0.1
CHEK2-209ENST00000405598 PREX2Q70Z35 1606 aa15.65■□□□□ 0.1
CHEK2-209ENST00000405598 CFDP1Q9UEE9 299 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms