RNA–Protein interactions for RNA: ENST00000405108.5

EFR3B-205, Transcript of EFR3 homolog B, humanhuman

TSL 1 (best) BASIC

Gene EFR3B, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3B-205ENST00000405108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.65■□□□□ 0.9
EFR3B-205ENST00000405108 CUL7Q14999 1698 aa20.65■□□□□ 0.9
EFR3B-205ENST00000405108 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
EFR3B-205ENST00000405108 SCAF1Q9H7N4 1312 aaKnown RBP20.63■□□□□ 0.89
EFR3B-205ENST00000405108 AQRO60306 1485 aaKnown RBP eCLIP20.6■□□□□ 0.89
EFR3B-205ENST00000405108 ZEB1P37275 1124 aaPredicted RBP20.6■□□□□ 0.89
EFR3B-205ENST00000405108 ZNF608Q9ULD9 1512 aaPredicted RBP20.59■□□□□ 0.89
EFR3B-205ENST00000405108 KANK4Q5T7N3 995 aaPredicted RBP20.58■□□□□ 0.89
EFR3B-205ENST00000405108 IFT140Q96RY7 1462 aa20.58■□□□□ 0.89
EFR3B-205ENST00000405108 P3H3Q8IVL6 736 aa20.55■□□□□ 0.88
EFR3B-205ENST00000405108 CCER1Q8TC90 406 aaPredicted RBP20.55■□□□□ 0.88
EFR3B-205ENST00000405108 CTTNBP2Q8WZ74 1663 aa20.54■□□□□ 0.88
EFR3B-205ENST00000405108 HNRNPUL2Q1KMD3 747 aaKnown RBP20.52■□□□□ 0.87
EFR3B-205ENST00000405108 PBRM1Q86U86 1689 aa20.48■□□□□ 0.87
EFR3B-205ENST00000405108 FHOD3Q2V2M9 1422 aa20.47■□□□□ 0.87
EFR3B-205ENST00000405108 AEBP2Q6ZN18 517 aaPredicted RBP20.44■□□□□ 0.86
EFR3B-205ENST00000405108 EIF4G3O43432 1585 aaKnown RBP20.43■□□□□ 0.86
EFR3B-205ENST00000405108 PCF11O94913 1555 aaKnown RBP20.43■□□□□ 0.86
EFR3B-205ENST00000405108 GRIN2BQ13224 1484 aa20.42■□□□□ 0.86
EFR3B-205ENST00000405108 EFCAB5A4FU69 1503 aa20.42■□□□□ 0.86
EFR3B-205ENST00000405108 TIAM1Q13009 1591 aa20.41■□□□□ 0.86
EFR3B-205ENST00000405108 FHAD1B1AJZ9 1412 aa20.41■□□□□ 0.86
EFR3B-205ENST00000405108 ATP1B4Q9UN42 357 aaPredicted RBP20.39■□□□□ 0.85
EFR3B-205ENST00000405108 ADAMTS12P58397 1594 aa20.37■□□□□ 0.85
EFR3B-205ENST00000405108 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
EFR3B-205ENST00000405108 MAP3K1Q13233 1512 aa20.34■□□□□ 0.85
EFR3B-205ENST00000405108 SAMD9Q5K651 1589 aa20.33■□□□□ 0.84
EFR3B-205ENST00000405108 LRRC9Q6ZRR7 1453 aa20.32■□□□□ 0.84
EFR3B-205ENST00000405108 RRBP1Q9P2E9 1410 aaKnown RBP20.31■□□□□ 0.84
EFR3B-205ENST00000405108 CFAP43Q8NDM7 1665 aa20.31■□□□□ 0.84
EFR3B-205ENST00000405108 FYCO1Q9BQS8 1478 aa20.31■□□□□ 0.84
EFR3B-205ENST00000405108 FBLN2P98095 1184 aa20.31■□□□□ 0.84
EFR3B-205ENST00000405108 CASKIN1Q8WXD9 1431 aa20.29■□□□□ 0.84
EFR3B-205ENST00000405108 FMN1Q68DA7 1419 aa20.28■□□□□ 0.84
EFR3B-205ENST00000405108 CCNB3Q8WWL7 1395 aa20.27■□□□□ 0.83
EFR3B-205ENST00000405108 CHMP7Q8WUX9 453 aaPredicted RBP20.25■□□□□ 0.83
EFR3B-205ENST00000405108 IQGAP2Q13576 1575 aa20.25■□□□□ 0.83
EFR3B-205ENST00000405108 MAGI1Q96QZ7 1491 aaPredicted RBP20.23■□□□□ 0.83
EFR3B-205ENST00000405108 PHLDB1Q86UU1 1377 aa20.23■□□□□ 0.83
EFR3B-205ENST00000405108 ITGAEP38570 1179 aa20.22■□□□□ 0.83
EFR3B-205ENST00000405108 LRRIQ1Q96JM4 1722 aa20.2■□□□□ 0.82
EFR3B-205ENST00000405108 DAXXQ9UER7 740 aaPredicted RBP20.19■□□□□ 0.82
EFR3B-205ENST00000405108 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
EFR3B-205ENST00000405108 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
EFR3B-205ENST00000405108 KIAA0586Q9BVV6 1533 aa20.11■□□□□ 0.81
EFR3B-205ENST00000405108 FAM50AQ14320 339 aaKnown RBP20.11■□□□□ 0.81
EFR3B-205ENST00000405108 UGGT2Q9NYU1 1516 aa20.1■□□□□ 0.81
EFR3B-205ENST00000405108 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
EFR3B-205ENST00000405108 CENPBP07199 599 aaPredicted RBP20.08■□□□□ 0.81
EFR3B-205ENST00000405108 CEP170Q5SW79 1584 aa20.08■□□□□ 0.8
EFR3B-205ENST00000405108 DISP1Q96F81 1524 aa20.05■□□□□ 0.8
EFR3B-205ENST00000405108 DHX57Q6P158 1386 aaKnown RBP20.05■□□□□ 0.8
EFR3B-205ENST00000405108 ARID3CA6NKF2 412 aa20.05■□□□□ 0.8
EFR3B-205ENST00000405108 KIAA0556O60303 1618 aa20.04■□□□□ 0.8
EFR3B-205ENST00000405108 MAGI3Q5TCQ9 1506 aa20.03■□□□□ 0.8
EFR3B-205ENST00000405108 CHD1O14646 1710 aa20.03■□□□□ 0.8
EFR3B-205ENST00000405108 HECW1Q76N89 1606 aa20.03■□□□□ 0.8
EFR3B-205ENST00000405108 NUP160Q12769 1436 aa20.02■□□□□ 0.79
EFR3B-205ENST00000405108 CDK13Q14004 1512 aaKnown RBP20.01■□□□□ 0.79
EFR3B-205ENST00000405108 NCOA2Q15596 1464 aa20■□□□□ 0.79
EFR3B-205ENST00000405108 FGD6Q6ZV73 1430 aa20■□□□□ 0.79
EFR3B-205ENST00000405108 CCDC18Q5T9S5 1454 aa20■□□□□ 0.79
EFR3B-205ENST00000405108 EPRSP07814 1512 aaKnown RBP20■□□□□ 0.79
EFR3B-205ENST00000405108 RAB3GAP2Q9H2M9 1393 aa19.99■□□□□ 0.79
EFR3B-205ENST00000405108 EHBP1L1Q8N3D4 1523 aa19.99■□□□□ 0.79
EFR3B-205ENST00000405108 SUPT6HQ7KZ85 1726 aaKnown RBP19.97■□□□□ 0.79
EFR3B-205ENST00000405108 JPH4Q96JJ6 628 aa19.96■□□□□ 0.79
EFR3B-205ENST00000405108 MYOM3Q5VTT5 1437 aa19.93■□□□□ 0.78
EFR3B-205ENST00000405108 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
EFR3B-205ENST00000405108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.91■□□□□ 0.78
EFR3B-205ENST00000405108 CLSPNQ9HAW4 1339 aa19.9■□□□□ 0.78
EFR3B-205ENST00000405108 ARHGEF11O15085 1522 aa19.9■□□□□ 0.78
EFR3B-205ENST00000405108 NUP153P49790 1475 aaKnown RBP19.9■□□□□ 0.78
EFR3B-205ENST00000405108 RAPGEF6Q8TEU7 1601 aa19.89■□□□□ 0.77
EFR3B-205ENST00000405108 PTPRKQ15262 1439 aa19.86■□□□□ 0.77
EFR3B-205ENST00000405108 PLB1Q6P1J6 1458 aa19.86■□□□□ 0.77
EFR3B-205ENST00000405108 PTPN23Q9H3S7 1636 aa19.85■□□□□ 0.77
EFR3B-205ENST00000405108 CARMIL2Q6F5E8 1435 aa19.83■□□□□ 0.77
EFR3B-205ENST00000405108 MAPKBP1O60336 1514 aa19.83■□□□□ 0.76
EFR3B-205ENST00000405108 PRG4Q92954 1404 aaPredicted RBP19.82■□□□□ 0.76
EFR3B-205ENST00000405108 ZNF316A6NFI3 1004 aaPredicted RBP19.81■□□□□ 0.76
EFR3B-205ENST00000405108 DIEXFQ68CQ4 756 aaKnown RBP19.79■□□□□ 0.76
EFR3B-205ENST00000405108 CLASP1Q7Z460 1538 aa19.75■□□□□ 0.75
EFR3B-205ENST00000405108 TCOF1Q13428 1488 aaKnown RBP19.75■□□□□ 0.75
EFR3B-205ENST00000405108 HFM1A2PYH4 1435 aa19.74■□□□□ 0.75
EFR3B-205ENST00000405108 ERCC6L2Q5T890 1561 aa19.74■□□□□ 0.75
EFR3B-205ENST00000405108 ACIN1Q9UKV3 1341 aaKnown RBP19.73■□□□□ 0.75
EFR3B-205ENST00000405108 CHIC2Q9UKJ5 165 aa19.73■□□□□ 0.75
EFR3B-205ENST00000405108 CDK11AQ9UQ88 783 aaPredicted RBP19.73■□□□□ 0.75
EFR3B-205ENST00000405108 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
EFR3B-205ENST00000405108 SHROOM2Q13796 1616 aa19.72■□□□□ 0.75
EFR3B-205ENST00000405108 NAIPQ13075 1403 aa19.72■□□□□ 0.75
EFR3B-205ENST00000405108 MIA2Q96PC5 1412 aa19.71■□□□□ 0.75
EFR3B-205ENST00000405108 EIF5BO60841 1220 aaKnown RBP19.7■□□□□ 0.74
EFR3B-205ENST00000405108 ABCA8O94911 1581 aa19.69■□□□□ 0.74
EFR3B-205ENST00000405108 TROQ12816 1431 aaPredicted RBP19.69■□□□□ 0.74
EFR3B-205ENST00000405108 RRP7BPQ9NSQ0 103 aa19.69■□□□□ 0.74
EFR3B-205ENST00000405108 PTPRGP23470 1445 aa19.69■□□□□ 0.74
EFR3B-205ENST00000405108 ZNF644Q9H582 1327 aaPredicted RBP19.68■□□□□ 0.74
EFR3B-205ENST00000405108 SIN3AQ96ST3 1273 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms