RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 NUP160Q12769 1436 aa25.54■■□□□ 1.68
CDPF1-204ENST00000404744 CEP170Q5SW79 1584 aa25.52■■□□□ 1.68
CDPF1-204ENST00000404744 KIAA0586Q9BVV6 1533 aa25.47■■□□□ 1.67
CDPF1-204ENST00000404744 CTTNBP2Q8WZ74 1663 aa25.44■■□□□ 1.66
CDPF1-204ENST00000404744 TNIKQ9UKE5 1360 aa25.42■■□□□ 1.66
CDPF1-204ENST00000404744 IQGAP2Q13576 1575 aa25.4■■□□□ 1.66
CDPF1-204ENST00000404744 CLASP1Q7Z460 1538 aa25.39■■□□□ 1.66
CDPF1-204ENST00000404744 RANGAP1P46060 587 aaPredicted RBP25.38■■□□□ 1.65
CDPF1-204ENST00000404744 JPH4Q96JJ6 628 aa25.38■■□□□ 1.65
CDPF1-204ENST00000404744 UGGT2Q9NYU1 1516 aa25.26■■□□□ 1.63
CDPF1-204ENST00000404744 PRG4Q92954 1404 aaPredicted RBP25.25■■□□□ 1.63
CDPF1-204ENST00000404744 SHROOM2Q13796 1616 aa25.25■■□□□ 1.63
CDPF1-204ENST00000404744 CARMIL2Q6F5E8 1435 aa25.25■■□□□ 1.63
CDPF1-204ENST00000404744 CLIP1P30622 1438 aa25.2■■□□□ 1.62
CDPF1-204ENST00000404744 CEP162Q5TB80 1403 aa25.2■■□□□ 1.62
CDPF1-204ENST00000404744 P3H3Q8IVL6 736 aa25.2■■□□□ 1.62
CDPF1-204ENST00000404744 EFCAB5A4FU69 1503 aa25.17■■□□□ 1.62
CDPF1-204ENST00000404744 DISP1Q96F81 1524 aa25.16■■□□□ 1.62
CDPF1-204ENST00000404744 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
CDPF1-204ENST00000404744 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
CDPF1-204ENST00000404744 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
CDPF1-204ENST00000404744 KIAA0556O60303 1618 aa25.13■■□□□ 1.61
CDPF1-204ENST00000404744 SAMD9Q5K651 1589 aa25.13■■□□□ 1.61
CDPF1-204ENST00000404744 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
CDPF1-204ENST00000404744 ARHGAP35Q9NRY4 1499 aa25.12■■□□□ 1.61
CDPF1-204ENST00000404744 TTBK1Q5TCY1 1321 aaPredicted RBP25.12■■□□□ 1.61
CDPF1-204ENST00000404744 ERCC6L2Q5T890 1561 aa25.1■■□□□ 1.61
CDPF1-204ENST00000404744 FHOD3Q2V2M9 1422 aa25.07■■□□□ 1.6
CDPF1-204ENST00000404744 PTPRGP23470 1445 aa25.05■■□□□ 1.6
CDPF1-204ENST00000404744 ARAP1Q96P48 1450 aa24.99■■□□□ 1.59
CDPF1-204ENST00000404744 FMN1Q68DA7 1419 aa24.98■■□□□ 1.59
CDPF1-204ENST00000404744 CYB5RLQ6IPT4 315 aa24.93■■□□□ 1.58
CDPF1-204ENST00000404744 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
CDPF1-204ENST00000404744 UACAQ9BZF9 1416 aa24.87■■□□□ 1.57
CDPF1-204ENST00000404744 VPS8Q8N3P4 1428 aa24.87■■□□□ 1.57
CDPF1-204ENST00000404744 PLB1Q6P1J6 1458 aa24.85■■□□□ 1.57
CDPF1-204ENST00000404744 RAPGEF6Q8TEU7 1601 aa24.82■■□□□ 1.56
CDPF1-204ENST00000404744 ABCA8O94911 1581 aa24.81■■□□□ 1.56
CDPF1-204ENST00000404744 CASKIN1Q8WXD9 1431 aa24.81■■□□□ 1.56
CDPF1-204ENST00000404744 ABCC2Q92887 1545 aa24.78■■□□□ 1.56
CDPF1-204ENST00000404744 UHRF1BP1LA0JNW5 1464 aa24.77■■□□□ 1.56
CDPF1-204ENST00000404744 FYCO1Q9BQS8 1478 aa24.77■■□□□ 1.56
CDPF1-204ENST00000404744 NPM1P06748 294 aaKnown RBP eCLIP24.77■■□□□ 1.56
CDPF1-204ENST00000404744 PCF11O94913 1555 aaKnown RBP24.77■■□□□ 1.56
CDPF1-204ENST00000404744 HECW1Q76N89 1606 aa24.76■■□□□ 1.55
CDPF1-204ENST00000404744 ARID3CA6NKF2 412 aa24.76■■□□□ 1.55
CDPF1-204ENST00000404744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.75■■□□□ 1.55
CDPF1-204ENST00000404744 APLP2Q06481 763 aa24.75■■□□□ 1.55
CDPF1-204ENST00000404744 HNRNPUL2Q1KMD3 747 aaKnown RBP24.75■■□□□ 1.55
CDPF1-204ENST00000404744 ADCY10Q96PN6 1610 aa24.72■■□□□ 1.55
CDPF1-204ENST00000404744 NUP153P49790 1475 aaKnown RBP24.72■■□□□ 1.55
CDPF1-204ENST00000404744 CCDC18Q5T9S5 1454 aa24.67■■□□□ 1.54
CDPF1-204ENST00000404744 EPRSP07814 1512 aaKnown RBP24.66■■□□□ 1.54
CDPF1-204ENST00000404744 KDM5BQ9UGL1 1544 aa24.65■■□□□ 1.54
CDPF1-204ENST00000404744 ATP10BO94823 1461 aa24.65■■□□□ 1.54
CDPF1-204ENST00000404744 CDK11AQ9UQ88 783 aaPredicted RBP24.64■■□□□ 1.53
CDPF1-204ENST00000404744 CDK13Q14004 1512 aaKnown RBP24.62■■□□□ 1.53
CDPF1-204ENST00000404744 ZCCHC11Q5TAX3 1644 aaKnown RBP24.61■■□□□ 1.53
CDPF1-204ENST00000404744 PLEKHD1A6NEE1 506 aa24.6■■□□□ 1.53
CDPF1-204ENST00000404744 LRRIQ1Q96JM4 1722 aa24.58■■□□□ 1.52
CDPF1-204ENST00000404744 TRHP20396 242 aaPredicted RBP24.55■■□□□ 1.52
CDPF1-204ENST00000404744 MAP3K1Q13233 1512 aa24.54■■□□□ 1.52
CDPF1-204ENST00000404744 TIAM1Q13009 1591 aa24.54■■□□□ 1.52
CDPF1-204ENST00000404744 MTUS2Q5JR59 1369 aa24.52■■□□□ 1.52
CDPF1-204ENST00000404744 CFAP43Q8NDM7 1665 aa24.51■■□□□ 1.51
CDPF1-204ENST00000404744 ASXL2Q76L83 1435 aa24.5■■□□□ 1.51
CDPF1-204ENST00000404744 MAPKBP1O60336 1514 aa24.48■■□□□ 1.51
CDPF1-204ENST00000404744 KCNH8Q96L42 1107 aa24.47■■□□□ 1.51
CDPF1-204ENST00000404744 WDR7Q9Y4E6 1490 aa24.46■■□□□ 1.51
CDPF1-204ENST00000404744 KANK4Q5T7N3 995 aaPredicted RBP24.45■■□□□ 1.51
CDPF1-204ENST00000404744 TROQ12816 1431 aaPredicted RBP24.45■■□□□ 1.51
CDPF1-204ENST00000404744 LRRC9Q6ZRR7 1453 aa24.45■■□□□ 1.5
CDPF1-204ENST00000404744 PPARGC1BQ86YN6 1023 aaKnown RBP24.43■■□□□ 1.5
CDPF1-204ENST00000404744 EHBP1L1Q8N3D4 1523 aa24.42■■□□□ 1.5
CDPF1-204ENST00000404744 MAGI3Q5TCQ9 1506 aa24.41■■□□□ 1.5
CDPF1-204ENST00000404744 KIF14Q15058 1648 aa24.36■■□□□ 1.49
CDPF1-204ENST00000404744 FAM69CQ0P6D2 419 aa24.33■■□□□ 1.49
CDPF1-204ENST00000404744 SUPT6HQ7KZ85 1726 aaKnown RBP24.33■■□□□ 1.49
CDPF1-204ENST00000404744 ABCC10Q5T3U5 1492 aa24.31■■□□□ 1.48
CDPF1-204ENST00000404744 NCOA2Q15596 1464 aa24.29■■□□□ 1.48
CDPF1-204ENST00000404744 CCNB3Q8WWL7 1395 aa24.27■■□□□ 1.48
CDPF1-204ENST00000404744 DIP2BQ9P265 1576 aa24.26■■□□□ 1.47
CDPF1-204ENST00000404744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.26■■□□□ 1.47
CDPF1-204ENST00000404744 GLI2P10070 1586 aa24.24■■□□□ 1.47
CDPF1-204ENST00000404744 ABCA9Q8IUA7 1624 aa24.23■■□□□ 1.47
CDPF1-204ENST00000404744 CD109Q6YHK3 1445 aa24.22■■□□□ 1.47
CDPF1-204ENST00000404744 TTC37Q6PGP7 1564 aa24.21■■□□□ 1.47
CDPF1-204ENST00000404744 CFDP1Q9UEE9 299 aaPredicted RBP24.17■■□□□ 1.46
CDPF1-204ENST00000404744 PHLDB1Q86UU1 1377 aa24.16■■□□□ 1.46
CDPF1-204ENST00000404744 GPATCH8Q9UKJ3 1502 aaKnown RBP24.16■■□□□ 1.46
CDPF1-204ENST00000404744 KIF13AQ9H1H9 1805 aa24.16■■□□□ 1.46
CDPF1-204ENST00000404744 MYO5CQ9NQX4 1742 aa24.16■■□□□ 1.46
CDPF1-204ENST00000404744 PLCH2O75038 1416 aa24.15■■□□□ 1.46
CDPF1-204ENST00000404744 MYOM3Q5VTT5 1437 aa24.15■■□□□ 1.46
CDPF1-204ENST00000404744 MAP3K4Q9Y6R4 1608 aa24.14■■□□□ 1.46
CDPF1-204ENST00000404744 ITSN2Q9NZM3 1697 aa24.14■■□□□ 1.45
CDPF1-204ENST00000404744 EFCAB2Q5VUJ9 269 aa24.14■■□□□ 1.45
CDPF1-204ENST00000404744 ZNF777Q9ULD5 760 aaPredicted RBP24.13■■□□□ 1.45
CDPF1-204ENST00000404744 ARHGAP5Q13017 1502 aa24.12■■□□□ 1.45
CDPF1-204ENST00000404744 CDC42BPAQ5VT25 1732 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms