RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 KIAA0586Q9BVV6 1533 aa27.99■■■□□ 2.07
CGREF1-205ENST00000404694 PRG4Q92954 1404 aaPredicted RBP27.98■■■□□ 2.07
CGREF1-205ENST00000404694 JPH4Q96JJ6 628 aa27.98■■■□□ 2.07
CGREF1-205ENST00000404694 RAPGEF2Q9Y4G8 1499 aa27.89■■■□□ 2.06
CGREF1-205ENST00000404694 IQGAP2Q13576 1575 aa27.83■■■□□ 2.05
CGREF1-205ENST00000404694 PRXQ9BXM0 1461 aa27.76■■■□□ 2.03
CGREF1-205ENST00000404694 TRHP20396 242 aaPredicted RBP27.73■■■□□ 2.03
CGREF1-205ENST00000404694 CTTNBP2Q8WZ74 1663 aa27.71■■■□□ 2.03
CGREF1-205ENST00000404694 CARMIL2Q6F5E8 1435 aa27.68■■■□□ 2.02
CGREF1-205ENST00000404694 UGGT2Q9NYU1 1516 aa27.67■■■□□ 2.02
CGREF1-205ENST00000404694 EEA1Q15075 1411 aa27.65■■■□□ 2.02
CGREF1-205ENST00000404694 DISP1Q96F81 1524 aa27.65■■■□□ 2.02
CGREF1-205ENST00000404694 ADCY10Q96PN6 1610 aa27.63■■■□□ 2.01
CGREF1-205ENST00000404694 CSRNP3Q8WYN3 585 aa27.62■■■□□ 2.01
CGREF1-205ENST00000404694 TNIKQ9UKE5 1360 aa27.61■■■□□ 2.01
CGREF1-205ENST00000404694 CHIC1Q5VXU3 224 aa27.6■■■□□ 2.01
CGREF1-205ENST00000404694 PTPRGP23470 1445 aa27.59■■■□□ 2.01
CGREF1-205ENST00000404694 KIAA0556O60303 1618 aa27.58■■■□□ 2.01
CGREF1-205ENST00000404694 TTBK1Q5TCY1 1321 aaPredicted RBP27.53■■■□□ 2
CGREF1-205ENST00000404694 FAM9AQ8IZU1 332 aaPredicted RBP27.49■■□□□ 1.99
CGREF1-205ENST00000404694 MAPKBP1O60336 1514 aa27.49■■□□□ 1.99
CGREF1-205ENST00000404694 NPM1P06748 294 aaKnown RBP eCLIP27.48■■□□□ 1.99
CGREF1-205ENST00000404694 GOLGA3Q08378 1498 aa27.46■■□□□ 1.99
CGREF1-205ENST00000404694 KIF13AQ9H1H9 1805 aa27.45■■□□□ 1.98
CGREF1-205ENST00000404694 KIF21BO75037 1637 aa27.44■■□□□ 1.98
CGREF1-205ENST00000404694 UHRF1BP1LA0JNW5 1464 aa27.43■■□□□ 1.98
CGREF1-205ENST00000404694 ABCC2Q92887 1545 aa27.42■■□□□ 1.98
CGREF1-205ENST00000404694 UACAQ9BZF9 1416 aa27.42■■□□□ 1.98
CGREF1-205ENST00000404694 ABCC10Q5T3U5 1492 aa27.37■■□□□ 1.97
CGREF1-205ENST00000404694 DIP2BQ9P265 1576 aa27.35■■□□□ 1.97
CGREF1-205ENST00000404694 SAMD9Q5K651 1589 aa27.33■■□□□ 1.97
CGREF1-205ENST00000404694 KDM5BQ9UGL1 1544 aa27.3■■□□□ 1.96
CGREF1-205ENST00000404694 PLB1Q6P1J6 1458 aa27.3■■□□□ 1.96
CGREF1-205ENST00000404694 ABCA8O94911 1581 aa27.28■■□□□ 1.96
CGREF1-205ENST00000404694 ZCCHC11Q5TAX3 1644 aaKnown RBP27.28■■□□□ 1.96
CGREF1-205ENST00000404694 FAM69CQ0P6D2 419 aa27.27■■□□□ 1.96
CGREF1-205ENST00000404694 ASXL2Q76L83 1435 aa27.25■■□□□ 1.95
CGREF1-205ENST00000404694 P3H3Q8IVL6 736 aa27.22■■□□□ 1.95
CGREF1-205ENST00000404694 RANGAP1P46060 587 aaPredicted RBP27.16■■□□□ 1.94
CGREF1-205ENST00000404694 EHMT2Q96KQ7 1210 aa27.15■■□□□ 1.94
CGREF1-205ENST00000404694 EFCAB5A4FU69 1503 aa27.15■■□□□ 1.94
CGREF1-205ENST00000404694 GLI2P10070 1586 aa27.14■■□□□ 1.94
CGREF1-205ENST00000404694 TSPOAP1O95153 1857 aa27.13■■□□□ 1.93
CGREF1-205ENST00000404694 FHOD3Q2V2M9 1422 aa27.12■■□□□ 1.93
CGREF1-205ENST00000404694 UBTFP17480 764 aaKnown RBP27.11■■□□□ 1.93
CGREF1-205ENST00000404694 EPRSP07814 1512 aaKnown RBP27.1■■□□□ 1.93
CGREF1-205ENST00000404694 RAPGEF6Q8TEU7 1601 aa27.1■■□□□ 1.93
CGREF1-205ENST00000404694 WDR7Q9Y4E6 1490 aa27.09■■□□□ 1.93
CGREF1-205ENST00000404694 MAP3K4Q9Y6R4 1608 aa27.04■■□□□ 1.92
CGREF1-205ENST00000404694 PPRC1Q5VV67 1664 aaKnown RBP27.03■■□□□ 1.92
CGREF1-205ENST00000404694 ATP10BO94823 1461 aa27.02■■□□□ 1.92
CGREF1-205ENST00000404694 ARID3CA6NKF2 412 aa26.99■■□□□ 1.91
CGREF1-205ENST00000404694 NUP153P49790 1475 aaKnown RBP26.99■■□□□ 1.91
CGREF1-205ENST00000404694 ARHGAP35Q9NRY4 1499 aa26.97■■□□□ 1.91
CGREF1-205ENST00000404694 KDM6BO15054 1643 aa26.97■■□□□ 1.91
CGREF1-205ENST00000404694 CFAP43Q8NDM7 1665 aa26.92■■□□□ 1.9
CGREF1-205ENST00000404694 KCNH8Q96L42 1107 aa26.9■■□□□ 1.9
CGREF1-205ENST00000404694 TEX14Q8IWB6 1497 aa26.88■■□□□ 1.89
CGREF1-205ENST00000404694 FMN1Q68DA7 1419 aa26.86■■□□□ 1.89
CGREF1-205ENST00000404694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.84■■□□□ 1.89
CGREF1-205ENST00000404694 HNRNPUL2Q1KMD3 747 aaKnown RBP26.84■■□□□ 1.89
CGREF1-205ENST00000404694 CD109Q6YHK3 1445 aa26.84■■□□□ 1.89
CGREF1-205ENST00000404694 MAGI3Q5TCQ9 1506 aa26.82■■□□□ 1.88
CGREF1-205ENST00000404694 ABCA9Q8IUA7 1624 aa26.82■■□□□ 1.88
CGREF1-205ENST00000404694 HECW1Q76N89 1606 aa26.81■■□□□ 1.88
CGREF1-205ENST00000404694 CDK13Q14004 1512 aaKnown RBP26.79■■□□□ 1.88
CGREF1-205ENST00000404694 COL17A1Q9UMD9 1497 aaPredicted RBP26.76■■□□□ 1.87
CGREF1-205ENST00000404694 CLIP1P30622 1438 aa26.72■■□□□ 1.87
CGREF1-205ENST00000404694 PLEKHD1A6NEE1 506 aa26.71■■□□□ 1.87
CGREF1-205ENST00000404694 ATP1B4Q9UN42 357 aaPredicted RBP26.7■■□□□ 1.86
CGREF1-205ENST00000404694 LRRIQ1Q96JM4 1722 aa26.7■■□□□ 1.86
CGREF1-205ENST00000404694 PCF11O94913 1555 aaKnown RBP26.69■■□□□ 1.86
CGREF1-205ENST00000404694 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.65■■□□□ 1.86
CGREF1-205ENST00000404694 TTC37Q6PGP7 1564 aa26.63■■□□□ 1.85
CGREF1-205ENST00000404694 CASKIN1Q8WXD9 1431 aa26.63■■□□□ 1.85
CGREF1-205ENST00000404694 ARAP3Q8WWN8 1544 aa26.6■■□□□ 1.85
CGREF1-205ENST00000404694 NEO1Q92859 1461 aa26.59■■□□□ 1.85
CGREF1-205ENST00000404694 FYCO1Q9BQS8 1478 aa26.59■■□□□ 1.85
CGREF1-205ENST00000404694 CCDC18Q5T9S5 1454 aa26.57■■□□□ 1.84
CGREF1-205ENST00000404694 PHLDB1Q86UU1 1377 aa26.56■■□□□ 1.84
CGREF1-205ENST00000404694 CEP162Q5TB80 1403 aa26.56■■□□□ 1.84
CGREF1-205ENST00000404694 CDK11AQ9UQ88 783 aaPredicted RBP26.56■■□□□ 1.84
CGREF1-205ENST00000404694 TROQ12816 1431 aaPredicted RBP26.54■■□□□ 1.84
CGREF1-205ENST00000404694 KIF14Q15058 1648 aa26.53■■□□□ 1.84
CGREF1-205ENST00000404694 CFAP74Q9C0B2 1584 aa26.52■■□□□ 1.84
CGREF1-205ENST00000404694 FANCAO15360 1455 aa26.5■■□□□ 1.83
CGREF1-205ENST00000404694 MYO5CQ9NQX4 1742 aa26.48■■□□□ 1.83
CGREF1-205ENST00000404694 AEBP2Q6ZN18 517 aaPredicted RBP26.47■■□□□ 1.83
CGREF1-205ENST00000404694 LOC105371045A0A1W2PR82 267 aa26.46■■□□□ 1.83
CGREF1-205ENST00000404694 FRMPD1Q5SYB0 1578 aa26.46■■□□□ 1.83
CGREF1-205ENST00000404694 PLCH2O75038 1416 aa26.45■■□□□ 1.82
CGREF1-205ENST00000404694 AKNAQ7Z591 1439 aa26.45■■□□□ 1.82
CGREF1-205ENST00000404694 RAPGEF3O95398 923 aa26.41■■□□□ 1.82
CGREF1-205ENST00000404694 RICTORQ6R327 1708 aa26.41■■□□□ 1.82
CGREF1-205ENST00000404694 KDM4FA0A1W2PPD8 638 aa26.39■■□□□ 1.82
CGREF1-205ENST00000404694 DENND4BO75064 1496 aaPredicted RBP26.39■■□□□ 1.81
CGREF1-205ENST00000404694 ADGRL1O94910 1474 aa26.36■■□□□ 1.81
CGREF1-205ENST00000404694 CDC42BPBQ9Y5S2 1711 aa26.34■■□□□ 1.81
CGREF1-205ENST00000404694 PREX2Q70Z35 1606 aa26.34■■□□□ 1.81
CGREF1-205ENST00000404694 ARHGAP5Q13017 1502 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms