RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 FAM9AQ8IZU1 332 aaPredicted RBP24.36■■□□□ 1.49
CDPF1-203ENST00000404583 CSRNP3Q8WYN3 585 aa24.36■■□□□ 1.49
CDPF1-203ENST00000404583 EEA1Q15075 1411 aa24.35■■□□□ 1.49
CDPF1-203ENST00000404583 SHROOM2Q13796 1616 aa24.33■■□□□ 1.48
CDPF1-203ENST00000404583 PRXQ9BXM0 1461 aa24.32■■□□□ 1.48
CDPF1-203ENST00000404583 KIAA0586Q9BVV6 1533 aa24.32■■□□□ 1.48
CDPF1-203ENST00000404583 JPH4Q96JJ6 628 aa24.32■■□□□ 1.48
CDPF1-203ENST00000404583 ERCC6L2Q5T890 1561 aa24.29■■□□□ 1.48
CDPF1-203ENST00000404583 TRHP20396 242 aaPredicted RBP24.27■■□□□ 1.48
CDPF1-203ENST00000404583 PRG4Q92954 1404 aaPredicted RBP24.25■■□□□ 1.47
CDPF1-203ENST00000404583 IQGAP2Q13576 1575 aa24.21■■□□□ 1.47
CDPF1-203ENST00000404583 CTTNBP2Q8WZ74 1663 aa24.17■■□□□ 1.46
CDPF1-203ENST00000404583 KIF21BO75037 1637 aa24.11■■□□□ 1.45
CDPF1-203ENST00000404583 EHMT2Q96KQ7 1210 aa24.08■■□□□ 1.44
CDPF1-203ENST00000404583 UGGT2Q9NYU1 1516 aa24.07■■□□□ 1.44
CDPF1-203ENST00000404583 CARMIL2Q6F5E8 1435 aa24.06■■□□□ 1.44
CDPF1-203ENST00000404583 DISP1Q96F81 1524 aa24.04■■□□□ 1.44
CDPF1-203ENST00000404583 TTBK1Q5TCY1 1321 aaPredicted RBP24■■□□□ 1.43
CDPF1-203ENST00000404583 TNIKQ9UKE5 1360 aa23.99■■□□□ 1.43
CDPF1-203ENST00000404583 GOLGA3Q08378 1498 aa23.98■■□□□ 1.43
CDPF1-203ENST00000404583 KIAA0556O60303 1618 aa23.97■■□□□ 1.43
CDPF1-203ENST00000404583 UBTFP17480 764 aaKnown RBP23.97■■□□□ 1.43
CDPF1-203ENST00000404583 PTPRGP23470 1445 aa23.97■■□□□ 1.43
CDPF1-203ENST00000404583 RANGAP1P46060 587 aaPredicted RBP23.93■■□□□ 1.42
CDPF1-203ENST00000404583 P3H3Q8IVL6 736 aa23.89■■□□□ 1.41
CDPF1-203ENST00000404583 ADCY10Q96PN6 1610 aa23.86■■□□□ 1.41
CDPF1-203ENST00000404583 SAMD9Q5K651 1589 aa23.84■■□□□ 1.41
CDPF1-203ENST00000404583 UACAQ9BZF9 1416 aa23.8■■□□□ 1.4
CDPF1-203ENST00000404583 NPM1P06748 294 aaKnown RBP eCLIP23.79■■□□□ 1.4
CDPF1-203ENST00000404583 KIF13AQ9H1H9 1805 aa23.77■■□□□ 1.4
CDPF1-203ENST00000404583 UHRF1BP1LA0JNW5 1464 aa23.75■■□□□ 1.39
CDPF1-203ENST00000404583 PLB1Q6P1J6 1458 aa23.75■■□□□ 1.39
CDPF1-203ENST00000404583 FHOD3Q2V2M9 1422 aa23.74■■□□□ 1.39
CDPF1-203ENST00000404583 ABCC2Q92887 1545 aa23.74■■□□□ 1.39
CDPF1-203ENST00000404583 EFCAB5A4FU69 1503 aa23.74■■□□□ 1.39
CDPF1-203ENST00000404583 ABCA8O94911 1581 aa23.71■■□□□ 1.39
CDPF1-203ENST00000404583 ARHGAP35Q9NRY4 1499 aa23.68■■□□□ 1.38
CDPF1-203ENST00000404583 LOC105371045A0A1W2PR82 267 aa23.67■■□□□ 1.38
CDPF1-203ENST00000404583 MAPKBP1O60336 1514 aa23.65■■□□□ 1.38
CDPF1-203ENST00000404583 KDM5BQ9UGL1 1544 aa23.65■■□□□ 1.38
CDPF1-203ENST00000404583 ZCCHC11Q5TAX3 1644 aaKnown RBP23.63■■□□□ 1.37
CDPF1-203ENST00000404583 RAPGEF6Q8TEU7 1601 aa23.61■■□□□ 1.37
CDPF1-203ENST00000404583 ARID3CA6NKF2 412 aa23.59■■□□□ 1.37
CDPF1-203ENST00000404583 FAM69CQ0P6D2 419 aa23.58■■□□□ 1.36
CDPF1-203ENST00000404583 ASXL2Q76L83 1435 aa23.58■■□□□ 1.36
CDPF1-203ENST00000404583 CLIP1P30622 1438 aa23.56■■□□□ 1.36
CDPF1-203ENST00000404583 ABCC10Q5T3U5 1492 aa23.56■■□□□ 1.36
CDPF1-203ENST00000404583 DIP2BQ9P265 1576 aa23.55■■□□□ 1.36
CDPF1-203ENST00000404583 ATP10BO94823 1461 aa23.54■■□□□ 1.36
CDPF1-203ENST00000404583 FMN1Q68DA7 1419 aa23.53■■□□□ 1.36
CDPF1-203ENST00000404583 NUP153P49790 1475 aaKnown RBP23.52■■□□□ 1.36
CDPF1-203ENST00000404583 TSPOAP1O95153 1857 aa23.52■■□□□ 1.35
CDPF1-203ENST00000404583 CEP162Q5TB80 1403 aa23.49■■□□□ 1.35
CDPF1-203ENST00000404583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.48■■□□□ 1.35
CDPF1-203ENST00000404583 HNRNPUL2Q1KMD3 747 aaKnown RBP23.48■■□□□ 1.35
CDPF1-203ENST00000404583 ATP1B4Q9UN42 357 aaPredicted RBP23.48■■□□□ 1.35
CDPF1-203ENST00000404583 WDR7Q9Y4E6 1490 aa23.46■■□□□ 1.35
CDPF1-203ENST00000404583 AEBP2Q6ZN18 517 aaPredicted RBP23.44■■□□□ 1.34
CDPF1-203ENST00000404583 EPRSP07814 1512 aaKnown RBP23.44■■□□□ 1.34
CDPF1-203ENST00000404583 KCNH8Q96L42 1107 aa23.42■■□□□ 1.34
CDPF1-203ENST00000404583 HECW1Q76N89 1606 aa23.41■■□□□ 1.34
CDPF1-203ENST00000404583 GLI2P10070 1586 aa23.4■■□□□ 1.34
CDPF1-203ENST00000404583 CDK13Q14004 1512 aaKnown RBP23.39■■□□□ 1.34
CDPF1-203ENST00000404583 PCF11O94913 1555 aaKnown RBP23.38■■□□□ 1.33
CDPF1-203ENST00000404583 CASKIN1Q8WXD9 1431 aa23.37■■□□□ 1.33
CDPF1-203ENST00000404583 LRRIQ1Q96JM4 1722 aa23.36■■□□□ 1.33
CDPF1-203ENST00000404583 PLEKHD1A6NEE1 506 aa23.34■■□□□ 1.33
CDPF1-203ENST00000404583 KDM6BO15054 1643 aa23.34■■□□□ 1.33
CDPF1-203ENST00000404583 MAP3K4Q9Y6R4 1608 aa23.31■■□□□ 1.32
CDPF1-203ENST00000404583 FYCO1Q9BQS8 1478 aa23.3■■□□□ 1.32
CDPF1-203ENST00000404583 PPRC1Q5VV67 1664 aaKnown RBP23.29■■□□□ 1.32
CDPF1-203ENST00000404583 CFAP43Q8NDM7 1665 aa23.27■■□□□ 1.31
CDPF1-203ENST00000404583 CD109Q6YHK3 1445 aa23.26■■□□□ 1.31
CDPF1-203ENST00000404583 CDK11AQ9UQ88 783 aaPredicted RBP23.25■■□□□ 1.31
CDPF1-203ENST00000404583 CCDC18Q5T9S5 1454 aa23.24■■□□□ 1.31
CDPF1-203ENST00000404583 ABCA9Q8IUA7 1624 aa23.23■■□□□ 1.31
CDPF1-203ENST00000404583 VPS8Q8N3P4 1428 aa23.18■■□□□ 1.3
CDPF1-203ENST00000404583 TEX14Q8IWB6 1497 aa23.18■■□□□ 1.3
CDPF1-203ENST00000404583 TROQ12816 1431 aaPredicted RBP23.18■■□□□ 1.3
CDPF1-203ENST00000404583 MAGI3Q5TCQ9 1506 aa23.17■■□□□ 1.3
CDPF1-203ENST00000404583 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.17■■□□□ 1.3
CDPF1-203ENST00000404583 KIF14Q15058 1648 aa23.14■■□□□ 1.29
CDPF1-203ENST00000404583 TTC37Q6PGP7 1564 aa23.13■■□□□ 1.29
CDPF1-203ENST00000404583 COL17A1Q9UMD9 1497 aaPredicted RBP23.1■■□□□ 1.29
CDPF1-203ENST00000404583 KDM4FA0A1W2PPD8 638 aa23.07■■□□□ 1.28
CDPF1-203ENST00000404583 MTUS2Q5JR59 1369 aa23.05■■□□□ 1.28
CDPF1-203ENST00000404583 MYO5CQ9NQX4 1742 aa23.03■■□□□ 1.28
CDPF1-203ENST00000404583 PLCH2O75038 1416 aa23.03■■□□□ 1.28
CDPF1-203ENST00000404583 TIAM1Q13009 1591 aa23.03■■□□□ 1.28
CDPF1-203ENST00000404583 NEO1Q92859 1461 aa23.02■■□□□ 1.28
CDPF1-203ENST00000404583 FANCAO15360 1455 aa23.01■■□□□ 1.27
CDPF1-203ENST00000404583 PHLDB1Q86UU1 1377 aa23■■□□□ 1.27
CDPF1-203ENST00000404583 EHBP1L1Q8N3D4 1523 aa22.98■■□□□ 1.27
CDPF1-203ENST00000404583 ARAP3Q8WWN8 1544 aa22.97■■□□□ 1.27
CDPF1-203ENST00000404583 AKNAQ7Z591 1439 aa22.97■■□□□ 1.27
CDPF1-203ENST00000404583 CFAP74Q9C0B2 1584 aa22.97■■□□□ 1.27
CDPF1-203ENST00000404583 CDC42BPBQ9Y5S2 1711 aa22.97■■□□□ 1.27
CDPF1-203ENST00000404583 CDC42BPAQ5VT25 1732 aa22.95■■□□□ 1.27
CDPF1-203ENST00000404583 MAP3K1Q13233 1512 aa22.95■■□□□ 1.26
CDPF1-203ENST00000404583 EFCAB2Q5VUJ9 269 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms