RNA–Protein interactions for RNA: ENST00000404167.1

COX6A1P3-201, Transcript of cytochrome c oxidase subunit 6A1 pseudogene 3, humanhuman

BASIC

Gene COX6A1P3, Length 293 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P3-201ENST00000404167 MAGI1Q96QZ7 1491 aaPredicted RBP12.47□□□□□ -0.41
COX6A1P3-201ENST00000404167 SAMD9Q5K651 1589 aa12.45□□□□□ -0.42
COX6A1P3-201ENST00000404167 SNAPC4Q5SXM2 1469 aa12.43□□□□□ -0.42
COX6A1P3-201ENST00000404167 IQGAP2Q13576 1575 aa12.41□□□□□ -0.42
COX6A1P3-201ENST00000404167 PCGF6Q9BYE7 350 aa12.41□□□□□ -0.42
COX6A1P3-201ENST00000404167 MAP3K1Q13233 1512 aa12.4□□□□□ -0.42
COX6A1P3-201ENST00000404167 GRIN2AQ12879 1464 aa12.4□□□□□ -0.43
COX6A1P3-201ENST00000404167 SYNJ2O15056 1496 aa12.39□□□□□ -0.43
COX6A1P3-201ENST00000404167 CFAP43Q8NDM7 1665 aa12.38□□□□□ -0.43
COX6A1P3-201ENST00000404167 PCF11O94913 1555 aaKnown RBP12.38□□□□□ -0.43
COX6A1P3-201ENST00000404167 FYCO1Q9BQS8 1478 aa12.37□□□□□ -0.43
COX6A1P3-201ENST00000404167 UGGT2Q9NYU1 1516 aa12.36□□□□□ -0.43
COX6A1P3-201ENST00000404167 TIAM1Q13009 1591 aa12.35□□□□□ -0.43
COX6A1P3-201ENST00000404167 KIAA0586Q9BVV6 1533 aa12.34□□□□□ -0.43
COX6A1P3-201ENST00000404167 FMN1Q68DA7 1419 aa12.34□□□□□ -0.43
COX6A1P3-201ENST00000404167 RANGAP1P46060 587 aaPredicted RBP12.33□□□□□ -0.44
COX6A1P3-201ENST00000404167 APLP2Q06481 763 aa12.33□□□□□ -0.44
COX6A1P3-201ENST00000404167 FHOD3Q2V2M9 1422 aa12.33□□□□□ -0.44
COX6A1P3-201ENST00000404167 CEP170Q5SW79 1584 aa12.32□□□□□ -0.44
COX6A1P3-201ENST00000404167 CASKIN1Q8WXD9 1431 aa12.32□□□□□ -0.44
COX6A1P3-201ENST00000404167 NUP160Q12769 1436 aa12.31□□□□□ -0.44
COX6A1P3-201ENST00000404167 KIAA0556O60303 1618 aa12.29□□□□□ -0.44
COX6A1P3-201ENST00000404167 HECW1Q76N89 1606 aa12.26□□□□□ -0.45
COX6A1P3-201ENST00000404167 PPARGC1BQ86YN6 1023 aaKnown RBP12.25□□□□□ -0.45
COX6A1P3-201ENST00000404167 CHD1O14646 1710 aa12.25□□□□□ -0.45
COX6A1P3-201ENST00000404167 LRRC9Q6ZRR7 1453 aa12.24□□□□□ -0.45
COX6A1P3-201ENST00000404167 DISP1Q96F81 1524 aa12.24□□□□□ -0.45
COX6A1P3-201ENST00000404167 LRRIQ1Q96JM4 1722 aa12.23□□□□□ -0.45
COX6A1P3-201ENST00000404167 CCDC18Q5T9S5 1454 aa12.23□□□□□ -0.45
COX6A1P3-201ENST00000404167 CHMP7Q8WUX9 453 aaPredicted RBP12.22□□□□□ -0.45
COX6A1P3-201ENST00000404167 RRBP1Q9P2E9 1410 aaKnown RBP12.2□□□□□ -0.46
COX6A1P3-201ENST00000404167 EHBP1L1Q8N3D4 1523 aa12.2□□□□□ -0.46
COX6A1P3-201ENST00000404167 HRCP23327 699 aa12.19□□□□□ -0.46
COX6A1P3-201ENST00000404167 SHROOM2Q13796 1616 aa12.19□□□□□ -0.46
COX6A1P3-201ENST00000404167 P3H3Q8IVL6 736 aa12.18□□□□□ -0.46
COX6A1P3-201ENST00000404167 TTBK1Q5TCY1 1321 aaPredicted RBP12.17□□□□□ -0.46
COX6A1P3-201ENST00000404167 KANK4Q5T7N3 995 aaPredicted RBP12.17□□□□□ -0.46
COX6A1P3-201ENST00000404167 RAPGEF6Q8TEU7 1601 aa12.17□□□□□ -0.46
COX6A1P3-201ENST00000404167 CARMIL2Q6F5E8 1435 aa12.17□□□□□ -0.46
COX6A1P3-201ENST00000404167 SUPT6HQ7KZ85 1726 aaKnown RBP12.15□□□□□ -0.46
COX6A1P3-201ENST00000404167 EPRSP07814 1512 aaKnown RBP12.14□□□□□ -0.47
COX6A1P3-201ENST00000404167 CLASP1Q7Z460 1538 aa12.13□□□□□ -0.47
COX6A1P3-201ENST00000404167 FBLN2P98095 1184 aa12.12□□□□□ -0.47
COX6A1P3-201ENST00000404167 CCNB3Q8WWL7 1395 aa12.12□□□□□ -0.47
COX6A1P3-201ENST00000404167 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
COX6A1P3-201ENST00000404167 ABCA8O94911 1581 aa12.1□□□□□ -0.47
COX6A1P3-201ENST00000404167 NUP153P49790 1475 aaKnown RBP12.1□□□□□ -0.47
COX6A1P3-201ENST00000404167 MTUS2Q5JR59 1369 aa12.1□□□□□ -0.47
COX6A1P3-201ENST00000404167 MAGI3Q5TCQ9 1506 aa12.09□□□□□ -0.47
COX6A1P3-201ENST00000404167 PHLDB1Q86UU1 1377 aa12.08□□□□□ -0.48
COX6A1P3-201ENST00000404167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.08□□□□□ -0.48
COX6A1P3-201ENST00000404167 CDK13Q14004 1512 aaKnown RBP12.08□□□□□ -0.48
COX6A1P3-201ENST00000404167 JPH4Q96JJ6 628 aa12.08□□□□□ -0.48
COX6A1P3-201ENST00000404167 ZEB1P37275 1124 aaPredicted RBP12.07□□□□□ -0.48
COX6A1P3-201ENST00000404167 NCOA2Q15596 1464 aa12.07□□□□□ -0.48
COX6A1P3-201ENST00000404167 PRG4Q92954 1404 aaPredicted RBP12.06□□□□□ -0.48
COX6A1P3-201ENST00000404167 ATP1B4Q9UN42 357 aaPredicted RBP12.06□□□□□ -0.48
COX6A1P3-201ENST00000404167 ADCY10Q96PN6 1610 aa12.06□□□□□ -0.48
COX6A1P3-201ENST00000404167 FGD6Q6ZV73 1430 aa12.05□□□□□ -0.48
COX6A1P3-201ENST00000404167 MYOM3Q5VTT5 1437 aa12.04□□□□□ -0.48
COX6A1P3-201ENST00000404167 PLB1Q6P1J6 1458 aa12.04□□□□□ -0.48
COX6A1P3-201ENST00000404167 ITSN2Q9NZM3 1697 aa12.01□□□□□ -0.49
COX6A1P3-201ENST00000404167 TCOF1Q13428 1488 aaKnown RBP12.01□□□□□ -0.49
COX6A1P3-201ENST00000404167 TROQ12816 1431 aaPredicted RBP12□□□□□ -0.49
COX6A1P3-201ENST00000404167 PTPN23Q9H3S7 1636 aa12□□□□□ -0.49
COX6A1P3-201ENST00000404167 PTPRGP23470 1445 aa11.99□□□□□ -0.49
COX6A1P3-201ENST00000404167 MIA2Q96PC5 1412 aa11.99□□□□□ -0.49
COX6A1P3-201ENST00000404167 KIF14Q15058 1648 aa11.98□□□□□ -0.49
COX6A1P3-201ENST00000404167 ABCC2Q92887 1545 aa11.98□□□□□ -0.49
COX6A1P3-201ENST00000404167 ERCC6L2Q5T890 1561 aa11.97□□□□□ -0.49
COX6A1P3-201ENST00000404167 HNRNPUL2Q1KMD3 747 aaKnown RBP11.97□□□□□ -0.49
COX6A1P3-201ENST00000404167 CDK11AQ9UQ88 783 aaPredicted RBP11.97□□□□□ -0.49
COX6A1P3-201ENST00000404167 UHRF1BP1LA0JNW5 1464 aa11.95□□□□□ -0.5
COX6A1P3-201ENST00000404167 UACAQ9BZF9 1416 aa11.95□□□□□ -0.5
COX6A1P3-201ENST00000404167 ATP10BO94823 1461 aa11.95□□□□□ -0.5
COX6A1P3-201ENST00000404167 CCER1Q8TC90 406 aaPredicted RBP11.94□□□□□ -0.5
COX6A1P3-201ENST00000404167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.93□□□□□ -0.5
COX6A1P3-201ENST00000404167 AKNAQ7Z591 1439 aa11.93□□□□□ -0.5
COX6A1P3-201ENST00000404167 GCC2Q8IWJ2 1684 aa11.91□□□□□ -0.5
COX6A1P3-201ENST00000404167 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
COX6A1P3-201ENST00000404167 DNMT1P26358 1616 aaKnown RBP11.9□□□□□ -0.5
COX6A1P3-201ENST00000404167 FAM50AQ14320 339 aaKnown RBP11.9□□□□□ -0.5
COX6A1P3-201ENST00000404167 CDC42BPAQ5VT25 1732 aa11.9□□□□□ -0.5
COX6A1P3-201ENST00000404167 ABCC10Q5T3U5 1492 aa11.89□□□□□ -0.51
COX6A1P3-201ENST00000404167 HFM1A2PYH4 1435 aa11.89□□□□□ -0.51
COX6A1P3-201ENST00000404167 SETD5Q9C0A6 1442 aa11.89□□□□□ -0.51
COX6A1P3-201ENST00000404167 ZCCHC11Q5TAX3 1644 aaKnown RBP11.89□□□□□ -0.51
COX6A1P3-201ENST00000404167 CROCC2H7BZ55 1655 aa11.88□□□□□ -0.51
COX6A1P3-201ENST00000404167 KDM5BQ9UGL1 1544 aa11.88□□□□□ -0.51
COX6A1P3-201ENST00000404167 PREX2Q70Z35 1606 aa11.88□□□□□ -0.51
COX6A1P3-201ENST00000404167 GPATCH8Q9UKJ3 1502 aaKnown RBP11.87□□□□□ -0.51
COX6A1P3-201ENST00000404167 ARID3CA6NKF2 412 aa11.87□□□□□ -0.51
COX6A1P3-201ENST00000404167 RAB3GAP2Q9H2M9 1393 aa11.87□□□□□ -0.51
COX6A1P3-201ENST00000404167 DHX57Q6P158 1386 aaKnown RBP11.86□□□□□ -0.51
COX6A1P3-201ENST00000404167 CAMSAP2Q08AD1 1489 aa11.86□□□□□ -0.51
COX6A1P3-201ENST00000404167 ADGBQ8N7X0 1667 aa11.85□□□□□ -0.51
COX6A1P3-201ENST00000404167 PTPRKQ15262 1439 aa11.85□□□□□ -0.51
COX6A1P3-201ENST00000404167 PLEKHD1A6NEE1 506 aa11.84□□□□□ -0.51
COX6A1P3-201ENST00000404167 MYO5CQ9NQX4 1742 aa11.83□□□□□ -0.52
COX6A1P3-201ENST00000404167 ITGAEP38570 1179 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms