RNA–Protein interactions for RNA: ENST00000404113.6

LPIN1-205, Transcript of lipin 1, humanhuman

TSL 1 (best)

Gene LPIN1, Length 4,005 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-205ENST00000404113 RRBP1Q9P2E9 1410 aaKnown RBP14.65□□□□□ -0.06
LPIN1-205ENST00000404113 SCAF1Q9H7N4 1312 aaKnown RBP14.64□□□□□ -0.07
LPIN1-205ENST00000404113 CUL7Q14999 1698 aa14.63□□□□□ -0.07
LPIN1-205ENST00000404113 PHLDB1Q86UU1 1377 aa14.62□□□□□ -0.07
LPIN1-205ENST00000404113 CFAP43Q8NDM7 1665 aa14.62□□□□□ -0.07
LPIN1-205ENST00000404113 ITGAEP38570 1179 aa14.61□□□□□ -0.07
LPIN1-205ENST00000404113 DHX57Q6P158 1386 aaKnown RBP14.6□□□□□ -0.07
LPIN1-205ENST00000404113 LRRC9Q6ZRR7 1453 aa14.6□□□□□ -0.07
LPIN1-205ENST00000404113 GAPVD1Q14C86 1478 aa14.59□□□□□ -0.07
LPIN1-205ENST00000404113 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
LPIN1-205ENST00000404113 PDS5BQ9NTI5 1447 aa14.58□□□□□ -0.08
LPIN1-205ENST00000404113 AQRO60306 1485 aaKnown RBP eCLIP14.58□□□□□ -0.088e-7■■■■□ 25.8
LPIN1-205ENST00000404113 CCNB3Q8WWL7 1395 aa14.57□□□□□ -0.08
LPIN1-205ENST00000404113 PBRM1Q86U86 1689 aa14.57□□□□□ -0.08
LPIN1-205ENST00000404113 SNAPC4Q5SXM2 1469 aa14.56□□□□□ -0.08
LPIN1-205ENST00000404113 ZNF608Q9ULD9 1512 aaPredicted RBP14.55□□□□□ -0.08
LPIN1-205ENST00000404113 SAMD9Q5K651 1589 aa14.54□□□□□ -0.08
LPIN1-205ENST00000404113 ATP1B4Q9UN42 357 aaPredicted RBP14.54□□□□□ -0.08
LPIN1-205ENST00000404113 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
LPIN1-205ENST00000404113 MAP3K1Q13233 1512 aa14.51□□□□□ -0.09
LPIN1-205ENST00000404113 MAGI3Q5TCQ9 1506 aa14.49□□□□□ -0.09
LPIN1-205ENST00000404113 EFCAB5A4FU69 1503 aa14.49□□□□□ -0.09
LPIN1-205ENST00000404113 MAPKBP1O60336 1514 aa14.49□□□□□ -0.09
LPIN1-205ENST00000404113 FYCO1Q9BQS8 1478 aa14.48□□□□□ -0.09
LPIN1-205ENST00000404113 CASKIN1Q8WXD9 1431 aa14.47□□□□□ -0.09
LPIN1-205ENST00000404113 RAB3GAP2Q9H2M9 1393 aa14.47□□□□□ -0.09
LPIN1-205ENST00000404113 ADAMTS12P58397 1594 aa14.46□□□□□ -0.09
LPIN1-205ENST00000404113 FHAD1B1AJZ9 1412 aa14.46□□□□□ -0.09
LPIN1-205ENST00000404113 MRC2Q9UBG0 1479 aa14.45□□□□□ -0.1
LPIN1-205ENST00000404113 ZNF316A6NFI3 1004 aaPredicted RBP14.45□□□□□ -0.1
LPIN1-205ENST00000404113 GRIN2BQ13224 1484 aa14.43□□□□□ -0.1
LPIN1-205ENST00000404113 PTPRKQ15262 1439 aa14.43□□□□□ -0.1
LPIN1-205ENST00000404113 FAM50AQ14320 339 aaKnown RBP14.41□□□□□ -0.1
LPIN1-205ENST00000404113 WDR62O43379 1518 aa14.41□□□□□ -0.1
LPIN1-205ENST00000404113 ARID3CA6NKF2 412 aa14.4□□□□□ -0.1
LPIN1-205ENST00000404113 NEUROD1Q13562 356 aa14.4□□□□□ -0.1
LPIN1-205ENST00000404113 EIF4G3O43432 1585 aaKnown RBP14.4□□□□□ -0.1
LPIN1-205ENST00000404113 MIER1Q8N108 512 aa14.38□□□□□ -0.11
LPIN1-205ENST00000404113 THOC2Q8NI27 1593 aaKnown RBP14.38□□□□□ -0.11
LPIN1-205ENST00000404113 CDK13Q14004 1512 aaKnown RBP14.37□□□□□ -0.11
LPIN1-205ENST00000404113 IQGAP2Q13576 1575 aa14.37□□□□□ -0.11
LPIN1-205ENST00000404113 FMN1Q68DA7 1419 aa14.36□□□□□ -0.11
LPIN1-205ENST00000404113 SIN3AQ96ST3 1273 aa14.34□□□□□ -0.11
LPIN1-205ENST00000404113 FGD6Q6ZV73 1430 aa14.34□□□□□ -0.11
LPIN1-205ENST00000404113 NCOA2Q15596 1464 aa14.33□□□□□ -0.11
LPIN1-205ENST00000404113 SETD5Q9C0A6 1442 aa14.33□□□□□ -0.12
LPIN1-205ENST00000404113 DISP1Q96F81 1524 aa14.31□□□□□ -0.12
LPIN1-205ENST00000404113 KDM6BO15054 1643 aa14.3□□□□□ -0.12
LPIN1-205ENST00000404113 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
LPIN1-205ENST00000404113 MTUS2Q5JR59 1369 aa14.3□□□□□ -0.12
LPIN1-205ENST00000404113 IFT140Q96RY7 1462 aa14.3□□□□□ -0.12
LPIN1-205ENST00000404113 UGGT2Q9NYU1 1516 aa14.29□□□□□ -0.12
LPIN1-205ENST00000404113 CEP170Q5SW79 1584 aa14.28□□□□□ -0.12
LPIN1-205ENST00000404113 ACIN1Q9UKV3 1341 aaKnown RBP14.28□□□□□ -0.12
LPIN1-205ENST00000404113 SUPT6HQ7KZ85 1726 aaKnown RBP14.28□□□□□ -0.12
LPIN1-205ENST00000404113 YTHDC1Q96MU7 727 aaKnown RBP14.27□□□□□ -0.12
LPIN1-205ENST00000404113 EPRSP07814 1512 aaKnown RBP14.27□□□□□ -0.12
LPIN1-205ENST00000404113 GTF3C3Q9Y5Q9 886 aa14.27□□□□□ -0.13
LPIN1-205ENST00000404113 ERCC6Q03468 1493 aa14.27□□□□□ -0.13
LPIN1-205ENST00000404113 KIAA0556O60303 1618 aa14.26□□□□□ -0.13
LPIN1-205ENST00000404113 CLSPNQ9HAW4 1339 aa14.26□□□□□ -0.13
LPIN1-205ENST00000404113 PTPN23Q9H3S7 1636 aa14.26□□□□□ -0.13
LPIN1-205ENST00000404113 GRIN2AQ12879 1464 aa14.26□□□□□ -0.13
LPIN1-205ENST00000404113 EHBP1L1Q8N3D4 1523 aa14.25□□□□□ -0.13
LPIN1-205ENST00000404113 MYOM3Q5VTT5 1437 aa14.25□□□□□ -0.13
LPIN1-205ENST00000404113 DENND4BO75064 1496 aaPredicted RBP14.24□□□□□ -0.13
LPIN1-205ENST00000404113 HECW1Q76N89 1606 aa14.23□□□□□ -0.13
LPIN1-205ENST00000404113 NUP153P49790 1475 aaKnown RBP14.22□□□□□ -0.13
LPIN1-205ENST00000404113 NAIPQ13075 1403 aa14.22□□□□□ -0.13
LPIN1-205ENST00000404113 CCDC18Q5T9S5 1454 aa14.21□□□□□ -0.13
LPIN1-205ENST00000404113 HIRIP3Q9BW71 556 aaPredicted RBP14.2□□□□□ -0.14
LPIN1-205ENST00000404113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.19□□□□□ -0.141e-7■■■■■ 59.4
LPIN1-205ENST00000404113 CHIC2Q9UKJ5 165 aa14.19□□□□□ -0.14
LPIN1-205ENST00000404113 KIAA0586Q9BVV6 1533 aa14.19□□□□□ -0.14
LPIN1-205ENST00000404113 PLB1Q6P1J6 1458 aa14.19□□□□□ -0.14
LPIN1-205ENST00000404113 HFM1A2PYH4 1435 aa14.18□□□□□ -0.14
LPIN1-205ENST00000404113 ZNF644Q9H582 1327 aaPredicted RBP14.18□□□□□ -0.14
LPIN1-205ENST00000404113 KDM5BQ9UGL1 1544 aa14.17□□□□□ -0.14
LPIN1-205ENST00000404113 KCNH8Q96L42 1107 aa14.16□□□□□ -0.14
LPIN1-205ENST00000404113 RRP7BPQ9NSQ0 103 aa14.16□□□□□ -0.14
LPIN1-205ENST00000404113 FBLN2P98095 1184 aa14.16□□□□□ -0.14
LPIN1-205ENST00000404113 RAPGEF6Q8TEU7 1601 aa14.16□□□□□ -0.14
LPIN1-205ENST00000404113 KIF14Q15058 1648 aa14.15□□□□□ -0.14
LPIN1-205ENST00000404113 CENPBP07199 599 aaPredicted RBP14.14□□□□□ -0.15
LPIN1-205ENST00000404113 TCOF1Q13428 1488 aaKnown RBP14.14□□□□□ -0.15
LPIN1-205ENST00000404113 PRG4Q92954 1404 aaPredicted RBP14.13□□□□□ -0.15
LPIN1-205ENST00000404113 SYNJ2O15056 1496 aa14.13□□□□□ -0.15
LPIN1-205ENST00000404113 GCC2Q8IWJ2 1684 aa14.13□□□□□ -0.15
LPIN1-205ENST00000404113 MAGI1Q96QZ7 1491 aaPredicted RBP14.12□□□□□ -0.15
LPIN1-205ENST00000404113 FOXD1Q16676 465 aa14.1□□□□□ -0.15
LPIN1-205ENST00000404113 UACAQ9BZF9 1416 aa14.09□□□□□ -0.15
LPIN1-205ENST00000404113 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
LPIN1-205ENST00000404113 NUP160Q12769 1436 aa14.09□□□□□ -0.15
LPIN1-205ENST00000404113 ABCC5O15440 1437 aa14.04□□□□□ -0.16
LPIN1-205ENST00000404113 CHD1O14646 1710 aa14.04□□□□□ -0.16
LPIN1-205ENST00000404113 PPP1R15AO75807 674 aaPredicted RBP14.04□□□□□ -0.16
LPIN1-205ENST00000404113 DNMT1P26358 1616 aaKnown RBP14.04□□□□□ -0.16
LPIN1-205ENST00000404113 JPH4Q96JJ6 628 aa14.03□□□□□ -0.16
LPIN1-205ENST00000404113 DAPK1P53355 1430 aa14.03□□□□□ -0.16
LPIN1-205ENST00000404113 ERCC6L2Q5T890 1561 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms