RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 CUX1P39880 1505 aa17.28■□□□□ 0.36
NUP43-204ENST00000403890 ILDR1Q86SU0 546 aaPredicted RBP17.28■□□□□ 0.36
NUP43-204ENST00000403890 ERCC6L2Q5T890 1561 aa17.28■□□□□ 0.36
NUP43-204ENST00000403890 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
NUP43-204ENST00000403890 GRIN2AQ12879 1464 aa17.2■□□□□ 0.34
NUP43-204ENST00000403890 RNF39Q9H2S5 420 aa17.2■□□□□ 0.34
NUP43-204ENST00000403890 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
NUP43-204ENST00000403890 KDM4FA0A1W2PPD8 638 aa17.19■□□□□ 0.34
NUP43-204ENST00000403890 FAM69CQ0P6D2 419 aa17.18■□□□□ 0.34
NUP43-204ENST00000403890 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
NUP43-204ENST00000403890 KIF13AQ9H1H9 1805 aa17.17■□□□□ 0.34
NUP43-204ENST00000403890 NUP160Q12769 1436 aa17.17■□□□□ 0.34
NUP43-204ENST00000403890 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
NUP43-204ENST00000403890 NPM1P06748 294 aaKnown RBP eCLIP17.12■□□□□ 0.33
NUP43-204ENST00000403890 SHROOM2Q13796 1616 aa17.11■□□□□ 0.33
NUP43-204ENST00000403890 ABCC10Q5T3U5 1492 aa17.11■□□□□ 0.33
NUP43-204ENST00000403890 NCBP3Q53F19 620 aaKnown RBP17.1■□□□□ 0.33
NUP43-204ENST00000403890 PRG4Q92954 1404 aaPredicted RBP17.08■□□□□ 0.32
NUP43-204ENST00000403890 JPH4Q96JJ6 628 aa17.08■□□□□ 0.32
NUP43-204ENST00000403890 FHAD1B1AJZ9 1412 aa17.07■□□□□ 0.32
NUP43-204ENST00000403890 ADAMTS12P58397 1594 aa17.06■□□□□ 0.32
NUP43-204ENST00000403890 C1QBPQ07021 282 aaKnown RBP17.04■□□□□ 0.32
NUP43-204ENST00000403890 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
NUP43-204ENST00000403890 KDM6BO15054 1643 aa17.01■□□□□ 0.31
NUP43-204ENST00000403890 MAPKBP1O60336 1514 aa17.01■□□□□ 0.31
NUP43-204ENST00000403890 DIP2BQ9P265 1576 aa16.98■□□□□ 0.31
NUP43-204ENST00000403890 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
NUP43-204ENST00000403890 ADCY10Q96PN6 1610 aa16.9■□□□□ 0.3
NUP43-204ENST00000403890 TSPOAP1O95153 1857 aa16.89■□□□□ 0.29
NUP43-204ENST00000403890 ADGRL1O94910 1474 aa16.85■□□□□ 0.29
NUP43-204ENST00000403890 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
NUP43-204ENST00000403890 RUSC2Q8N2Y8 1516 aa16.83■□□□□ 0.28
NUP43-204ENST00000403890 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
NUP43-204ENST00000403890 HECW2Q9P2P5 1572 aa16.79■□□□□ 0.28
NUP43-204ENST00000403890 KIAA0586Q9BVV6 1533 aa16.77■□□□□ 0.28
NUP43-204ENST00000403890 PTPRGP23470 1445 aa16.77■□□□□ 0.27
NUP43-204ENST00000403890 PLB1Q6P1J6 1458 aa16.73■□□□□ 0.27
NUP43-204ENST00000403890 TTBK1Q5TCY1 1321 aaPredicted RBP16.73■□□□□ 0.27
NUP43-204ENST00000403890 FBXO41Q8TF61 875 aa16.73■□□□□ 0.27
NUP43-204ENST00000403890 ASXL2Q76L83 1435 aa16.72■□□□□ 0.27
NUP43-204ENST00000403890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.272e-7■□□□□ 8
NUP43-204ENST00000403890 COL17A1Q9UMD9 1497 aaPredicted RBP16.71■□□□□ 0.27
NUP43-204ENST00000403890 GLI2P10070 1586 aa16.71■□□□□ 0.27
NUP43-204ENST00000403890 ABCC2Q92887 1545 aa16.7■□□□□ 0.26
NUP43-204ENST00000403890 PPRC1Q5VV67 1664 aaKnown RBP16.69■□□□□ 0.26
NUP43-204ENST00000403890 TNIKQ9UKE5 1360 aa16.67■□□□□ 0.26
NUP43-204ENST00000403890 IGF1RP08069 1367 aa16.65■□□□□ 0.26
NUP43-204ENST00000403890 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
NUP43-204ENST00000403890 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
NUP43-204ENST00000403890 CARMIL2Q6F5E8 1435 aa16.64■□□□□ 0.25
NUP43-204ENST00000403890 TEX14Q8IWB6 1497 aa16.62■□□□□ 0.25
NUP43-204ENST00000403890 UHRF1BP1LA0JNW5 1464 aa16.61■□□□□ 0.25
NUP43-204ENST00000403890 EPRSP07814 1512 aaKnown RBP16.6■□□□□ 0.25
NUP43-204ENST00000403890 UACAQ9BZF9 1416 aa16.59■□□□□ 0.25
NUP43-204ENST00000403890 MAP3K4Q9Y6R4 1608 aa16.56■□□□□ 0.24
NUP43-204ENST00000403890 CUL7Q14999 1698 aa16.56■□□□□ 0.24
NUP43-204ENST00000403890 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
NUP43-204ENST00000403890 KDM5BQ9UGL1 1544 aa16.53■□□□□ 0.24
NUP43-204ENST00000403890 CARMIL1Q5VZK9 1371 aa16.52■□□□□ 0.24
NUP43-204ENST00000403890 IQGAP2Q13576 1575 aa16.47■□□□□ 0.23
NUP43-204ENST00000403890 DISP1Q96F81 1524 aa16.46■□□□□ 0.23
NUP43-204ENST00000403890 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
NUP43-204ENST00000403890 WDR7Q9Y4E6 1490 aa16.44■□□□□ 0.22
NUP43-204ENST00000403890 ZCCHC11Q5TAX3 1644 aaKnown RBP16.44■□□□□ 0.22
NUP43-204ENST00000403890 MAGI3Q5TCQ9 1506 aa16.43■□□□□ 0.22
NUP43-204ENST00000403890 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
NUP43-204ENST00000403890 KCNH8Q96L42 1107 aa16.42■□□□□ 0.22
NUP43-204ENST00000403890 PTPRMP28827 1452 aa16.38■□□□□ 0.21
NUP43-204ENST00000403890 KIF21BO75037 1637 aa16.37■□□□□ 0.21
NUP43-204ENST00000403890 UGGT2Q9NYU1 1516 aa16.36■□□□□ 0.21
NUP43-204ENST00000403890 CFAP43Q8NDM7 1665 aa16.34■□□□□ 0.21
NUP43-204ENST00000403890 ARAP3Q8WWN8 1544 aa16.32■□□□□ 0.2
NUP43-204ENST00000403890 KIAA0556O60303 1618 aa16.31■□□□□ 0.2
NUP43-204ENST00000403890 ADAMTSL3P82987 1691 aa16.3■□□□□ 0.2
NUP43-204ENST00000403890 PCF11O94913 1555 aaKnown RBP16.3■□□□□ 0.2
NUP43-204ENST00000403890 SOCS7O14512 581 aa16.29■□□□□ 0.2
NUP43-204ENST00000403890 ARID4BQ4LE39 1312 aaPredicted RBP16.28■□□□□ 0.2
NUP43-204ENST00000403890 CERKQ8TCT0 537 aa16.28■□□□□ 0.2
NUP43-204ENST00000403890 PHLDB1Q86UU1 1377 aa16.27■□□□□ 0.2
NUP43-204ENST00000403890 RAPGEF2Q9Y4G8 1499 aa16.27■□□□□ 0.19
NUP43-204ENST00000403890 RAPGEF3O95398 923 aa16.26■□□□□ 0.19
NUP43-204ENST00000403890 ILDR2Q71H61 639 aa16.26■□□□□ 0.19
NUP43-204ENST00000403890 DISP3Q9P2K9 1392 aa16.25■□□□□ 0.19
NUP43-204ENST00000403890 HSPA2P54652 639 aa16.24■□□□□ 0.19
NUP43-204ENST00000403890 U3KPZ7 1027 aaPredicted RBP16.23■□□□□ 0.19
NUP43-204ENST00000403890 ABCA8O94911 1581 aa16.22■□□□□ 0.19
NUP43-204ENST00000403890 GOLGA3Q08378 1498 aa16.21■□□□□ 0.19
NUP43-204ENST00000403890 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
NUP43-204ENST00000403890 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
NUP43-204ENST00000403890 MADDQ8WXG6 1647 aa16.19■□□□□ 0.18
NUP43-204ENST00000403890 ARID3CA6NKF2 412 aa16.17■□□□□ 0.18
NUP43-204ENST00000403890 NEO1Q92859 1461 aa16.15■□□□□ 0.18
NUP43-204ENST00000403890 ATP10BO94823 1461 aa16.14■□□□□ 0.17
NUP43-204ENST00000403890 KCNA4P22459 653 aa16.12■□□□□ 0.17
NUP43-204ENST00000403890 ABCA9Q8IUA7 1624 aa16.12■□□□□ 0.17
NUP43-204ENST00000403890 CAPN15O75808 1086 aa16.11■□□□□ 0.17
NUP43-204ENST00000403890 RIMS1Q86UR5 1692 aaKnown RBP16.11■□□□□ 0.17
NUP43-204ENST00000403890 POGZQ7Z3K3 1410 aa16.09■□□□□ 0.17
NUP43-204ENST00000403890 FRMPD1Q5SYB0 1578 aa16.08■□□□□ 0.16
NUP43-204ENST00000403890 CTTNBP2Q8WZ74 1663 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms