RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 RANGAP1P46060 587 aaPredicted RBP36.59■■■■□ 3.45
TRIOBP-203ENST00000403663 MAGI1Q96QZ7 1491 aaPredicted RBP36.52■■■■□ 3.44
TRIOBP-203ENST00000403663 SCAF1Q9H7N4 1312 aaKnown RBP36.46■■■■□ 3.43
TRIOBP-203ENST00000403663 CTTNBP2Q8WZ74 1663 aa36.46■■■■□ 3.43
TRIOBP-203ENST00000403663 CLIP1P30622 1438 aa36.45■■■■□ 3.43
TRIOBP-203ENST00000403663 SYNJ2O15056 1496 aa36.41■■■■□ 3.42
TRIOBP-203ENST00000403663 GRIN2AQ12879 1464 aa36.4■■■■□ 3.42
TRIOBP-203ENST00000403663 FBLN2P98095 1184 aa36.37■■■■□ 3.41
TRIOBP-203ENST00000403663 CHMP7Q8WUX9 453 aaPredicted RBP36.35■■■■□ 3.41
TRIOBP-203ENST00000403663 ARHGAP35Q9NRY4 1499 aa36.26■■■■□ 3.39
TRIOBP-203ENST00000403663 CHD1O14646 1710 aa36.26■■■■□ 3.39
TRIOBP-203ENST00000403663 CEP170Q5SW79 1584 aa36.24■■■■□ 3.39
TRIOBP-203ENST00000403663 ARAP1Q96P48 1450 aa36.21■■■■□ 3.39
TRIOBP-203ENST00000403663 IQGAP2Q13576 1575 aa36.18■■■■□ 3.38
TRIOBP-203ENST00000403663 NUP160Q12769 1436 aa36.13■■■■□ 3.37
TRIOBP-203ENST00000403663 P3H3Q8IVL6 736 aa36.12■■■■□ 3.37
TRIOBP-203ENST00000403663 KIAA0586Q9BVV6 1533 aa36.12■■■■□ 3.37
TRIOBP-203ENST00000403663 VPS8Q8N3P4 1428 aa36.05■■■■□ 3.36
TRIOBP-203ENST00000403663 SAMD9Q5K651 1589 aa36.04■■■■□ 3.36
TRIOBP-203ENST00000403663 EFCAB5A4FU69 1503 aa36.03■■■■□ 3.36
TRIOBP-203ENST00000403663 FHOD3Q2V2M9 1422 aa36.02■■■■□ 3.36
TRIOBP-203ENST00000403663 UGGT2Q9NYU1 1516 aa35.97■■■■□ 3.35
TRIOBP-203ENST00000403663 DISP1Q96F81 1524 aa35.88■■■■□ 3.33
TRIOBP-203ENST00000403663 JPH4Q96JJ6 628 aa35.85■■■■□ 3.33
TRIOBP-203ENST00000403663 KIAA0556O60303 1618 aa35.83■■■■□ 3.33
TRIOBP-203ENST00000403663 PCF11O94913 1555 aaKnown RBP35.78■■■■□ 3.32
TRIOBP-203ENST00000403663 CLASP1Q7Z460 1538 aa35.76■■■■□ 3.32
TRIOBP-203ENST00000403663 ACIN1Q9UKV3 1341 aaKnown RBP35.72■■■■□ 3.31
TRIOBP-203ENST00000403663 TTBK1Q5TCY1 1321 aaPredicted RBP35.71■■■■□ 3.31
TRIOBP-203ENST00000403663 SHROOM2Q13796 1616 aa35.71■■■■□ 3.31
TRIOBP-203ENST00000403663 FMN1Q68DA7 1419 aa35.7■■■■□ 3.31
TRIOBP-203ENST00000403663 PRG4Q92954 1404 aaPredicted RBP35.68■■■■□ 3.3
TRIOBP-203ENST00000403663 ERCC6L2Q5T890 1561 aa35.63■■■■□ 3.29
TRIOBP-203ENST00000403663 ATP1B4Q9UN42 357 aaPredicted RBP35.63■■■■□ 3.29
TRIOBP-203ENST00000403663 CARMIL2Q6F5E8 1435 aa35.63■■■■□ 3.29
TRIOBP-203ENST00000403663 CASKIN1Q8WXD9 1431 aa35.63■■■■□ 3.29
TRIOBP-203ENST00000403663 FYCO1Q9BQS8 1478 aa35.6■■■■□ 3.29
TRIOBP-203ENST00000403663 NEUROD1Q13562 356 aa35.6■■■■□ 3.29
TRIOBP-203ENST00000403663 APLP2Q06481 763 aa35.59■■■■□ 3.29
TRIOBP-203ENST00000403663 LRRIQ1Q96JM4 1722 aa35.59■■■■□ 3.29
TRIOBP-203ENST00000403663 OSCARQ8IYS5 282 aa35.55■■■■□ 3.28
TRIOBP-203ENST00000403663 KANK4Q5T7N3 995 aaPredicted RBP35.54■■■■□ 3.28
TRIOBP-203ENST00000403663 TIAM1Q13009 1591 aa35.51■■■■□ 3.28
TRIOBP-203ENST00000403663 CFAP43Q8NDM7 1665 aa35.47■■■■□ 3.27
TRIOBP-203ENST00000403663 PLB1Q6P1J6 1458 aa35.46■■■■□ 3.27
TRIOBP-203ENST00000403663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.44■■■■□ 3.26
TRIOBP-203ENST00000403663 RAPGEF6Q8TEU7 1601 aa35.43■■■■□ 3.26
TRIOBP-203ENST00000403663 HECW1Q76N89 1606 aa35.42■■■■□ 3.26
TRIOBP-203ENST00000403663 ARID3CA6NKF2 412 aa35.41■■■■□ 3.26
TRIOBP-203ENST00000403663 MAP3K1Q13233 1512 aa35.41■■■■□ 3.26
TRIOBP-203ENST00000403663 MYT1Q01538 1121 aa35.38■■■■□ 3.25
TRIOBP-203ENST00000403663 PTPRGP23470 1445 aa35.38■■■■□ 3.25
TRIOBP-203ENST00000403663 CCER1Q8TC90 406 aaPredicted RBP35.37■■■■□ 3.25
TRIOBP-203ENST00000403663 NUP153P49790 1475 aaKnown RBP35.36■■■■□ 3.25
TRIOBP-203ENST00000403663 CDK13Q14004 1512 aaKnown RBP35.35■■■■□ 3.25
TRIOBP-203ENST00000403663 GTF3C3Q9Y5Q9 886 aa35.34■■■■□ 3.25
TRIOBP-203ENST00000403663 EPRSP07814 1512 aaKnown RBP35.34■■■■□ 3.25
TRIOBP-203ENST00000403663 LRRC9Q6ZRR7 1453 aa35.33■■■■□ 3.25
TRIOBP-203ENST00000403663 ABCA8O94911 1581 aa35.33■■■■□ 3.25
TRIOBP-203ENST00000403663 CENPBP07199 599 aaPredicted RBP35.3■■■■□ 3.24
TRIOBP-203ENST00000403663 DIEXFQ68CQ4 756 aaKnown RBP35.28■■■■□ 3.24
TRIOBP-203ENST00000403663 CCDC18Q5T9S5 1454 aa35.26■■■■□ 3.23
TRIOBP-203ENST00000403663 MAGI3Q5TCQ9 1506 aa35.24■■■■□ 3.23
TRIOBP-203ENST00000403663 UACAQ9BZF9 1416 aa35.17■■■■□ 3.22
TRIOBP-203ENST00000403663 MTUS2Q5JR59 1369 aa35.15■■■■□ 3.22
TRIOBP-203ENST00000403663 HNRNPUL2Q1KMD3 747 aaKnown RBP35.12■■■■□ 3.21
TRIOBP-203ENST00000403663 ATP10BO94823 1461 aa35.11■■■■□ 3.21
TRIOBP-203ENST00000403663 ABCC2Q92887 1545 aa35.08■■■■□ 3.21
TRIOBP-203ENST00000403663 EHBP1L1Q8N3D4 1523 aa35.08■■■■□ 3.21
TRIOBP-203ENST00000403663 PHLDB1Q86UU1 1377 aa35.05■■■■□ 3.2
TRIOBP-203ENST00000403663 ARHGEF11O15085 1522 aa35.04■■■■□ 3.2
TRIOBP-203ENST00000403663 SUPT6HQ7KZ85 1726 aaKnown RBP35■■■■□ 3.19
TRIOBP-203ENST00000403663 ADCY10Q96PN6 1610 aa34.99■■■■□ 3.19
TRIOBP-203ENST00000403663 NCOA2Q15596 1464 aa34.98■■■■□ 3.19
TRIOBP-203ENST00000403663 UHRF1BP1LA0JNW5 1464 aa34.96■■■■□ 3.19
TRIOBP-203ENST00000403663 RIMBP3CA6NJZ7 1639 aa34.92■■■■□ 3.18
TRIOBP-203ENST00000403663 RIMBP3BA6NNM3 1639 aa34.92■■■■□ 3.18
TRIOBP-203ENST00000403663 ZCCHC11Q5TAX3 1644 aaKnown RBP34.92■■■■□ 3.18
TRIOBP-203ENST00000403663 RIMBP3Q9UFD9 1639 aa34.92■■■■□ 3.18
TRIOBP-203ENST00000403663 CDK11AQ9UQ88 783 aaPredicted RBP34.92■■■■□ 3.18
TRIOBP-203ENST00000403663 TROQ12816 1431 aaPredicted RBP34.91■■■■□ 3.18
TRIOBP-203ENST00000403663 RRBP1Q9P2E9 1410 aaKnown RBP34.91■■■■□ 3.18
TRIOBP-203ENST00000403663 KIF14Q15058 1648 aa34.89■■■■□ 3.18
TRIOBP-203ENST00000403663 KDM5BQ9UGL1 1544 aa34.87■■■■□ 3.17
TRIOBP-203ENST00000403663 PLEKHD1A6NEE1 506 aa34.84■■■■□ 3.17
TRIOBP-203ENST00000403663 CCNB3Q8WWL7 1395 aa34.83■■■■□ 3.17
TRIOBP-203ENST00000403663 MYOM3Q5VTT5 1437 aa34.79■■■■□ 3.16
TRIOBP-203ENST00000403663 FGD6Q6ZV73 1430 aa34.77■■■■□ 3.16
TRIOBP-203ENST00000403663 ZNF316A6NFI3 1004 aaPredicted RBP34.73■■■■□ 3.15
TRIOBP-203ENST00000403663 CYB5RLQ6IPT4 315 aa34.73■■■■□ 3.15
TRIOBP-203ENST00000403663 FAM50AQ14320 339 aaKnown RBP34.7■■■■□ 3.14
TRIOBP-203ENST00000403663 ABCC10Q5T3U5 1492 aa34.68■■■■□ 3.14
TRIOBP-203ENST00000403663 ITGAEP38570 1179 aa34.65■■■■□ 3.14
TRIOBP-203ENST00000403663 PTPN23Q9H3S7 1636 aa34.65■■■■□ 3.14
TRIOBP-203ENST00000403663 KCNH8Q96L42 1107 aa34.64■■■■□ 3.14
TRIOBP-203ENST00000403663 CDC42BPAQ5VT25 1732 aa34.63■■■■□ 3.13
TRIOBP-203ENST00000403663 GPATCH8Q9UKJ3 1502 aaKnown RBP34.62■■■■□ 3.13
TRIOBP-203ENST00000403663 TTC37Q6PGP7 1564 aa34.6■■■■□ 3.13
TRIOBP-203ENST00000403663 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.58■■■■□ 3.13
TRIOBP-203ENST00000403663 ITSN2Q9NZM3 1697 aa34.57■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms