RNA–Protein interactions for RNA: ENST00000403538.1

TPT1P4-201, Transcript of tumor protein, translationally-controlled 1 pseudogene 4, humanhuman

BASIC

Gene TPT1P4, Length 519 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1P4-201ENST00000403538 TOP2AP11388 1531 aaKnown RBP15.48■□□□□ 0.07
TPT1P4-201ENST00000403538 SMARCA2P51531 1590 aa15.38■□□□□ 0.05
TPT1P4-201ENST00000403538 DCBLD2Q96PD2 775 aa15.31■□□□□ 0.04
TPT1P4-201ENST00000403538 ATAD2BQ9ULI0 1458 aa15.28■□□□□ 0.04
TPT1P4-201ENST00000403538 ZNF579Q8NAF0 562 aaKnown RBP15.28■□□□□ 0.04
TPT1P4-201ENST00000403538 CCDC88BA6NC98 1476 aa15.27■□□□□ 0.03
TPT1P4-201ENST00000403538 EIF4G1Q04637 1599 aaKnown RBP15.25■□□□□ 0.03
TPT1P4-201ENST00000403538 TRIM41Q8WV44 630 aa15.22■□□□□ 0.03
TPT1P4-201ENST00000403538 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
TPT1P4-201ENST00000403538 NCAPD3P42695 1498 aa15.21■□□□□ 0.03
TPT1P4-201ENST00000403538 BAZ1BQ9UIG0 1483 aaKnown RBP15.2■□□□□ 0.02
TPT1P4-201ENST00000403538 ZRANB1Q9UGI0 708 aa15.19■□□□□ 0.02
TPT1P4-201ENST00000403538 PLSCR2Q9NRY7 297 aa15.16■□□□□ 0.02
TPT1P4-201ENST00000403538 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
TPT1P4-201ENST00000403538 STAG3Q9UJ98 1225 aa15.13■□□□□ 0.01
TPT1P4-201ENST00000403538 GALR2O43603 387 aaPredicted RBP15.08■□□□□ 0
TPT1P4-201ENST00000403538 OTUD5Q96G74 571 aa15.06■□□□□ 0
TPT1P4-201ENST00000403538 EEA1Q15075 1411 aa15.06■□□□□ 0
TPT1P4-201ENST00000403538 CSRNP3Q8WYN3 585 aa15.02■□□□□ -0
TPT1P4-201ENST00000403538 POTEB2H3BUK9 544 aa14.98□□□□□ -0.01
TPT1P4-201ENST00000403538 PAK3O75914 559 aaPredicted RBP14.98□□□□□ -0.01
TPT1P4-201ENST00000403538 WRNQ14191 1432 aaPredicted RBP eCLIP14.94□□□□□ -0.02
TPT1P4-201ENST00000403538 PHF12Q96QT6 1004 aa14.9□□□□□ -0.02
TPT1P4-201ENST00000403538 CFTRP13569 1480 aa14.89□□□□□ -0.03
TPT1P4-201ENST00000403538 POTEMA6NI47 508 aa14.88□□□□□ -0.03
TPT1P4-201ENST00000403538 NPM1P06748 294 aaKnown RBP eCLIP14.88□□□□□ -0.03
TPT1P4-201ENST00000403538 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
TPT1P4-201ENST00000403538 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
TPT1P4-201ENST00000403538 LOC105371045A0A1W2PR82 267 aa14.85□□□□□ -0.03
TPT1P4-201ENST00000403538 PELP1Q8IZL8 1130 aaKnown RBP14.85□□□□□ -0.03
TPT1P4-201ENST00000403538 MNX1P50219 401 aaPredicted RBP14.84□□□□□ -0.03
TPT1P4-201ENST00000403538 CC2D2AQ9P2K1 1620 aa14.84□□□□□ -0.03
TPT1P4-201ENST00000403538 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
TPT1P4-201ENST00000403538 TOP2BQ02880 1626 aa14.83□□□□□ -0.04
TPT1P4-201ENST00000403538 POTEGQ6S5H5 508 aa14.82□□□□□ -0.04
TPT1P4-201ENST00000403538 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
TPT1P4-201ENST00000403538 PCDH10Q9P2E7 1040 aa14.81□□□□□ -0.04
TPT1P4-201ENST00000403538 ASTLQ6HA08 431 aaPredicted RBP14.8□□□□□ -0.04
TPT1P4-201ENST00000403538 CADPSQ9ULU8 1353 aa14.78□□□□□ -0.04
TPT1P4-201ENST00000403538 SYNJ1O43426 1573 aa14.77□□□□□ -0.05
TPT1P4-201ENST00000403538 C7P10643 843 aa14.76□□□□□ -0.05
TPT1P4-201ENST00000403538 SLC39A7Q92504 469 aa14.75□□□□□ -0.05
TPT1P4-201ENST00000403538 TNIKQ9UKE5 1360 aa14.74□□□□□ -0.05
TPT1P4-201ENST00000403538 METRNQ9UJH8 293 aa14.74□□□□□ -0.05
TPT1P4-201ENST00000403538 ATMINO43313 823 aaPredicted RBP14.72□□□□□ -0.05
TPT1P4-201ENST00000403538 MAMSTRQ6ZN01 415 aa14.72□□□□□ -0.05
TPT1P4-201ENST00000403538 KIF21BO75037 1637 aa14.71□□□□□ -0.05
TPT1P4-201ENST00000403538 MS4A3Q96HJ5 214 aa14.7□□□□□ -0.06
TPT1P4-201ENST00000403538 EHMT2Q96KQ7 1210 aa14.7□□□□□ -0.06
TPT1P4-201ENST00000403538 CEP164Q9UPV0 1460 aa14.69□□□□□ -0.06
TPT1P4-201ENST00000403538 SOGA1O94964 1423 aa14.69□□□□□ -0.06
TPT1P4-201ENST00000403538 FAM9AQ8IZU1 332 aaPredicted RBP14.69□□□□□ -0.06
TPT1P4-201ENST00000403538 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
TPT1P4-201ENST00000403538 POTEJP0CG39 1038 aa14.68□□□□□ -0.06
TPT1P4-201ENST00000403538 TRIM26Q12899 539 aaPredicted RBP14.64□□□□□ -0.07
TPT1P4-201ENST00000403538 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
TPT1P4-201ENST00000403538 CUX1P39880 1505 aa14.62□□□□□ -0.07
TPT1P4-201ENST00000403538 ERICH3Q5RHP9 1530 aa14.61□□□□□ -0.07
TPT1P4-201ENST00000403538 KIF27Q86VH2 1401 aa14.59□□□□□ -0.07
TPT1P4-201ENST00000403538 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
TPT1P4-201ENST00000403538 LCE2DQ5TA82 110 aaPredicted RBP14.55□□□□□ -0.08
TPT1P4-201ENST00000403538 CEP162Q5TB80 1403 aa14.55□□□□□ -0.08
TPT1P4-201ENST00000403538 PRXQ9BXM0 1461 aa14.55□□□□□ -0.08
TPT1P4-201ENST00000403538 FANCD2Q9BXW9 1451 aa14.55□□□□□ -0.08
TPT1P4-201ENST00000403538 SCUBE2Q9NQ36 999 aa14.54□□□□□ -0.08
TPT1P4-201ENST00000403538 CCDC61Q9Y6R9 512 aa14.54□□□□□ -0.08
TPT1P4-201ENST00000403538 ATN1P54259 1190 aaPredicted RBP14.53□□□□□ -0.08
TPT1P4-201ENST00000403538 DNMBPQ6XZF7 1577 aa14.52□□□□□ -0.08
TPT1P4-201ENST00000403538 PDS5BQ9NTI5 1447 aa14.52□□□□□ -0.08
TPT1P4-201ENST00000403538 KIF12Q96FN5 646 aa14.5□□□□□ -0.09
TPT1P4-201ENST00000403538 TSPYL2Q9H2G4 693 aaPredicted RBP14.5□□□□□ -0.09
TPT1P4-201ENST00000403538 UBTFP17480 764 aaKnown RBP14.49□□□□□ -0.09
TPT1P4-201ENST00000403538 FAM163AQ96GL9 167 aaPredicted RBP14.49□□□□□ -0.09
TPT1P4-201ENST00000403538 PCGF6Q9BYE7 350 aa14.47□□□□□ -0.09
TPT1P4-201ENST00000403538 PROM2Q8N271 834 aa14.46□□□□□ -0.09
TPT1P4-201ENST00000403538 POTEFA5A3E0 1075 aa14.44□□□□□ -0.1
TPT1P4-201ENST00000403538 ABCA10Q8WWZ4 1543 aa14.44□□□□□ -0.1
TPT1P4-201ENST00000403538 FGD5Q6ZNL6 1462 aa14.44□□□□□ -0.1
TPT1P4-201ENST00000403538 BMP2KQ9NSY1 1161 aaPredicted RBP14.43□□□□□ -0.1
TPT1P4-201ENST00000403538 RAPGEF2Q9Y4G8 1499 aa14.43□□□□□ -0.1
TPT1P4-201ENST00000403538 TOPBP1Q92547 1522 aa14.42□□□□□ -0.1
TPT1P4-201ENST00000403538 CLIP1P30622 1438 aa14.41□□□□□ -0.1
TPT1P4-201ENST00000403538 HRCP23327 699 aa14.4□□□□□ -0.1
TPT1P4-201ENST00000403538 TIE1P35590 1138 aa14.4□□□□□ -0.1
TPT1P4-201ENST00000403538 IGF1RP08069 1367 aa14.39□□□□□ -0.11
TPT1P4-201ENST00000403538 CUX2O14529 1486 aa14.38□□□□□ -0.11
TPT1P4-201ENST00000403538 VPS8Q8N3P4 1428 aa14.37□□□□□ -0.11
TPT1P4-201ENST00000403538 POLA1P09884 1462 aaPredicted RBP14.36□□□□□ -0.11
TPT1P4-201ENST00000403538 ZEB1P37275 1124 aaPredicted RBP14.35□□□□□ -0.11
TPT1P4-201ENST00000403538 CUL7Q14999 1698 aa14.34□□□□□ -0.11
TPT1P4-201ENST00000403538 MAP3K13O43283 966 aa14.34□□□□□ -0.11
TPT1P4-201ENST00000403538 TRPC6Q9Y210 931 aa14.34□□□□□ -0.11
TPT1P4-201ENST00000403538 NESP48681 1621 aa14.33□□□□□ -0.11
TPT1P4-201ENST00000403538 CARMIL1Q5VZK9 1371 aa14.33□□□□□ -0.12
TPT1P4-201ENST00000403538 WDR97A6NE52 1622 aa14.31□□□□□ -0.12
TPT1P4-201ENST00000403538 URB2Q14146 1524 aaKnown RBP14.3□□□□□ -0.12
TPT1P4-201ENST00000403538 TTLL13PA6NNM8 815 aa14.27□□□□□ -0.13
TPT1P4-201ENST00000403538 PLEKHG5O94827 1062 aa14.27□□□□□ -0.13
TPT1P4-201ENST00000403538 COLQQ9Y215 455 aaPredicted RBP14.27□□□□□ -0.13
TPT1P4-201ENST00000403538 SEC24BO95487 1268 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms