RNA–Protein interactions for RNA: ENST00000402744.8

CPE-201, Transcript of carboxypeptidase E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPE, Length 2,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPE-201ENST00000402744 ATP1B4Q9UN42 357 aaPredicted RBP32.9■■■□□ 2.86
CPE-201ENST00000402744 TARBP1Q13395 1621 aaKnown RBP32.87■■■□□ 2.85
CPE-201ENST00000402744 AQRO60306 1485 aaKnown RBP eCLIP32.86■■■□□ 2.85
CPE-201ENST00000402744 FHOD3Q2V2M9 1422 aa32.84■■■□□ 2.85
CPE-201ENST00000402744 ACIN1Q9UKV3 1341 aaKnown RBP32.84■■■□□ 2.85
CPE-201ENST00000402744 NEUROD1Q13562 356 aa32.81■■■□□ 2.84
CPE-201ENST00000402744 ERCC6Q03468 1493 aa32.75■■■□□ 2.83
CPE-201ENST00000402744 DIEXFQ68CQ4 756 aaKnown RBP32.7■■■□□ 2.83
CPE-201ENST00000402744 CTTNBP2Q8WZ74 1663 aa32.7■■■□□ 2.82
CPE-201ENST00000402744 ZNF608Q9ULD9 1512 aaPredicted RBP32.7■■■□□ 2.82
CPE-201ENST00000402744 FHAD1B1AJZ9 1412 aa32.67■■■□□ 2.82
CPE-201ENST00000402744 PCF11O94913 1555 aaKnown RBP32.65■■■□□ 2.82
CPE-201ENST00000402744 TIAM1Q13009 1591 aa32.63■■■□□ 2.81
CPE-201ENST00000402744 WDR62O43379 1518 aa32.63■■■□□ 2.81
CPE-201ENST00000402744 ITGAEP38570 1179 aa32.62■■■□□ 2.81
CPE-201ENST00000402744 EFCAB5A4FU69 1503 aa32.6■■■□□ 2.81
CPE-201ENST00000402744 PBRM1Q86U86 1689 aa32.6■■■□□ 2.81
CPE-201ENST00000402744 IFT140Q96RY7 1462 aa32.58■■■□□ 2.81
CPE-201ENST00000402744 GRIN2BQ13224 1484 aa32.55■■■□□ 2.8
CPE-201ENST00000402744 LRRC9Q6ZRR7 1453 aa32.55■■■□□ 2.8
CPE-201ENST00000402744 RRBP1Q9P2E9 1410 aaKnown RBP32.54■■■□□ 2.8
CPE-201ENST00000402744 CCNB3Q8WWL7 1395 aa32.53■■■□□ 2.8
CPE-201ENST00000402744 ZNF316A6NFI3 1004 aaPredicted RBP32.51■■■□□ 2.79
CPE-201ENST00000402744 GTF3C3Q9Y5Q9 886 aa32.51■■■□□ 2.79
CPE-201ENST00000402744 MAP3K1Q13233 1512 aa32.49■■■□□ 2.79
CPE-201ENST00000402744 ADAMTS12P58397 1594 aa32.48■■■□□ 2.79
CPE-201ENST00000402744 CASKIN1Q8WXD9 1431 aa32.48■■■□□ 2.79
CPE-201ENST00000402744 FMN1Q68DA7 1419 aa32.46■■■□□ 2.79
CPE-201ENST00000402744 FYCO1Q9BQS8 1478 aa32.46■■■□□ 2.79
CPE-201ENST00000402744 PHLDB1Q86UU1 1377 aa32.46■■■□□ 2.79
CPE-201ENST00000402744 CENPBP07199 599 aaPredicted RBP32.45■■■□□ 2.79
CPE-201ENST00000402744 SAMD9Q5K651 1589 aa32.42■■■□□ 2.78
CPE-201ENST00000402744 THOC2Q8NI27 1593 aaKnown RBP32.41■■■□□ 2.78
CPE-201ENST00000402744 SNAPC4Q5SXM2 1469 aa32.4■■■□□ 2.78
CPE-201ENST00000402744 FAM50AQ14320 339 aaKnown RBP32.39■■■□□ 2.78
CPE-201ENST00000402744 CFAP43Q8NDM7 1665 aa32.38■■■□□ 2.77
CPE-201ENST00000402744 EIF4G3O43432 1585 aaKnown RBP32.37■■■□□ 2.77
CPE-201ENST00000402744 FBLN2P98095 1184 aa32.35■■■□□ 2.77
CPE-201ENST00000402744 IQGAP2Q13576 1575 aa32.32■■■□□ 2.76
CPE-201ENST00000402744 ARID3CA6NKF2 412 aa32.31■■■□□ 2.76
CPE-201ENST00000402744 MTUS2Q5JR59 1369 aa32.27■■■□□ 2.76
CPE-201ENST00000402744 CHMP7Q8WUX9 453 aaPredicted RBP32.26■■■□□ 2.76
CPE-201ENST00000402744 CLSPNQ9HAW4 1339 aa32.24■■■□□ 2.75
CPE-201ENST00000402744 DHX57Q6P158 1386 aaKnown RBP32.22■■■□□ 2.75
CPE-201ENST00000402744 GRIN2AQ12879 1464 aa32.21■■■□□ 2.75
CPE-201ENST00000402744 LRRIQ1Q96JM4 1722 aa32.19■■■□□ 2.74
CPE-201ENST00000402744 KIAA0586Q9BVV6 1533 aa32.14■■■□□ 2.74
CPE-201ENST00000402744 RAB3GAP2Q9H2M9 1393 aa32.11■■■□□ 2.73
CPE-201ENST00000402744 MAGI1Q96QZ7 1491 aaPredicted RBP32.1■■■□□ 2.73
CPE-201ENST00000402744 UGGT2Q9NYU1 1516 aa32.09■■■□□ 2.73
CPE-201ENST00000402744 SYNJ2O15056 1496 aa32.07■■■□□ 2.72
CPE-201ENST00000402744 DISP1Q96F81 1524 aa32.05■■■□□ 2.72
CPE-201ENST00000402744 NCOA2Q15596 1464 aa32.04■■■□□ 2.72
CPE-201ENST00000402744 YTHDC1Q96MU7 727 aaKnown RBP32.04■■■□□ 2.72
CPE-201ENST00000402744 MAGI3Q5TCQ9 1506 aa32.04■■■□□ 2.72
CPE-201ENST00000402744 FGD6Q6ZV73 1430 aa32.04■■■□□ 2.72
CPE-201ENST00000402744 CDK13Q14004 1512 aaKnown RBP32.03■■■□□ 2.72
CPE-201ENST00000402744 CEP170Q5SW79 1584 aa32.01■■■□□ 2.72
CPE-201ENST00000402744 SETD5Q9C0A6 1442 aa32■■■□□ 2.71
CPE-201ENST00000402744 EPRSP07814 1512 aaKnown RBP31.99■■■□□ 2.71
CPE-201ENST00000402744 MIER1Q8N108 512 aa31.99■■■□□ 2.71
CPE-201ENST00000402744 KIAA0556O60303 1618 aa31.98■■■□□ 2.71
CPE-201ENST00000402744 HECW1Q76N89 1606 aa31.98■■■□□ 2.71
CPE-201ENST00000402744 CCDC18Q5T9S5 1454 aa31.96■■■□□ 2.71
CPE-201ENST00000402744 EHBP1L1Q8N3D4 1523 aa31.94■■■□□ 2.7
CPE-201ENST00000402744 MYOM3Q5VTT5 1437 aa31.92■■■□□ 2.7
CPE-201ENST00000402744 JPH4Q96JJ6 628 aa31.92■■■□□ 2.7
CPE-201ENST00000402744 SUPT6HQ7KZ85 1726 aaKnown RBP31.9■■■□□ 2.7
CPE-201ENST00000402744 PTPRKQ15262 1439 aa31.86■■■□□ 2.69
CPE-201ENST00000402744 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.86■■■□□ 2.69
CPE-201ENST00000402744 NUP160Q12769 1436 aa31.85■■■□□ 2.69
CPE-201ENST00000402744 NUP153P49790 1475 aaKnown RBP31.82■■■□□ 2.68
CPE-201ENST00000402744 PLB1Q6P1J6 1458 aa31.8■■■□□ 2.68
CPE-201ENST00000402744 CHIC2Q9UKJ5 165 aa31.78■■■□□ 2.68
CPE-201ENST00000402744 ARHGEF11O15085 1522 aa31.78■■■□□ 2.68
CPE-201ENST00000402744 MAPKBP1O60336 1514 aa31.76■■■□□ 2.68
CPE-201ENST00000402744 RAPGEF6Q8TEU7 1601 aa31.76■■■□□ 2.67
CPE-201ENST00000402744 CARMIL2Q6F5E8 1435 aa31.74■■■□□ 2.67
CPE-201ENST00000402744 PTPN23Q9H3S7 1636 aa31.74■■■□□ 2.67
CPE-201ENST00000402744 SIN3AQ96ST3 1273 aa31.73■■■□□ 2.67
CPE-201ENST00000402744 RRP7BPQ9NSQ0 103 aa31.7■■■□□ 2.67
CPE-201ENST00000402744 CDK11AQ9UQ88 783 aaPredicted RBP31.67■■■□□ 2.66
CPE-201ENST00000402744 PRG4Q92954 1404 aaPredicted RBP31.66■■■□□ 2.66
CPE-201ENST00000402744 ZNF644Q9H582 1327 aaPredicted RBP31.63■■■□□ 2.65
CPE-201ENST00000402744 HFM1A2PYH4 1435 aa31.63■■■□□ 2.65
CPE-201ENST00000402744 NAIPQ13075 1403 aa31.6■■■□□ 2.65
CPE-201ENST00000402744 TCOF1Q13428 1488 aaKnown RBP31.58■■■□□ 2.65
CPE-201ENST00000402744 MYT1Q01538 1121 aa31.57■■■□□ 2.64
CPE-201ENST00000402744 MIA2Q96PC5 1412 aa31.55■■■□□ 2.64
CPE-201ENST00000402744 CHD1O14646 1710 aa31.53■■■□□ 2.64
CPE-201ENST00000402744 TROQ12816 1431 aaPredicted RBP31.51■■■□□ 2.64
CPE-201ENST00000402744 ZNF777Q9ULD5 760 aaPredicted RBP31.5■■■□□ 2.63
CPE-201ENST00000402744 PTPRGP23470 1445 aa31.47■■■□□ 2.63
CPE-201ENST00000402744 CFDP1Q9UEE9 299 aaPredicted RBP31.46■■■□□ 2.63
CPE-201ENST00000402744 TRIM52Q96A61 297 aa31.45■■■□□ 2.63
CPE-201ENST00000402744 PLEKHD1A6NEE1 506 aa31.45■■■□□ 2.62
CPE-201ENST00000402744 UACAQ9BZF9 1416 aa31.44■■■□□ 2.62
CPE-201ENST00000402744 KIF14Q15058 1648 aa31.43■■■□□ 2.62
CPE-201ENST00000402744 ABCA8O94911 1581 aa31.43■■■□□ 2.62
CPE-201ENST00000402744 ATP10BO94823 1461 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms