RNA–Protein interactions for RNA: ENST00000401026.7

CCDC18-203, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC18, Length 4,552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-203ENST00000401026 NBR1Q14596 966 aa17.97■□□□□ 0.47
CCDC18-203ENST00000401026 EIF4G2P78344 907 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCDC18-203ENST00000401026 SALL2Q9Y467 1007 aaPredicted RBP17.91■□□□□ 0.46
CCDC18-203ENST00000401026 CCDC136Q96JN2 1154 aa17.89■□□□□ 0.46
CCDC18-203ENST00000401026 ANP32EQ9BTT0 268 aa17.89■□□□□ 0.45
CCDC18-203ENST00000401026 TMC1Q8TDI8 760 aa17.89■□□□□ 0.45
CCDC18-203ENST00000401026 RUSC2Q8N2Y8 1516 aa17.88■□□□□ 0.45
CCDC18-203ENST00000401026 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
CCDC18-203ENST00000401026 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
CCDC18-203ENST00000401026 KDM2AQ9Y2K7 1162 aa17.8■□□□□ 0.44
CCDC18-203ENST00000401026 ZBTB47Q9UFB7 747 aaPredicted RBP17.79■□□□□ 0.44
CCDC18-203ENST00000401026 SENP3-EIF4A1A0A087X0R7 540 aa17.78■□□□□ 0.44
CCDC18-203ENST00000401026 CARMIL1Q5VZK9 1371 aa17.77■□□□□ 0.44
CCDC18-203ENST00000401026 TIMELESSQ9UNS1 1208 aa17.76■□□□□ 0.43
CCDC18-203ENST00000401026 RAPGEF2Q9Y4G8 1499 aa17.76■□□□□ 0.43
CCDC18-203ENST00000401026 RAB3GAP2Q9H2M9 1393 aa17.76■□□□□ 0.43
CCDC18-203ENST00000401026 SETD5Q9C0A6 1442 aa17.76■□□□□ 0.43
CCDC18-203ENST00000401026 CUX2O14529 1486 aa17.74■□□□□ 0.43
CCDC18-203ENST00000401026 ARXQ96QS3 562 aa17.74■□□□□ 0.43
CCDC18-203ENST00000401026 FHAD1B1AJZ9 1412 aa17.73■□□□□ 0.43
CCDC18-203ENST00000401026 DHX57Q6P158 1386 aaKnown RBP17.71■□□□□ 0.43
CCDC18-203ENST00000401026 TSPY4P0CV99 314 aa17.71■□□□□ 0.43
CCDC18-203ENST00000401026 TSPY10P0CW01 314 aa17.71■□□□□ 0.43
CCDC18-203ENST00000401026 CCER2I3L3R5 266 aa17.71■□□□□ 0.43
CCDC18-203ENST00000401026 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCDC18-203ENST00000401026 TSHZ2Q9NRE2 1034 aa17.69■□□□□ 0.42
CCDC18-203ENST00000401026 GLIPR1L2Q4G1C9 344 aa17.68■□□□□ 0.42
CCDC18-203ENST00000401026 KCNH8Q96L42 1107 aa17.68■□□□□ 0.42
CCDC18-203ENST00000401026 RBM19Q9Y4C8 960 aaKnown RBP17.67■□□□□ 0.42
CCDC18-203ENST00000401026 PPP4R2Q9NY27 417 aa17.66■□□□□ 0.42
CCDC18-203ENST00000401026 PPP1R15AO75807 674 aaPredicted RBP17.64■□□□□ 0.42
CCDC18-203ENST00000401026 B4GALNT3Q6L9W6 998 aa17.63■□□□□ 0.41
CCDC18-203ENST00000401026 SMARCA4P51532 1647 aa17.63■□□□□ 0.41
CCDC18-203ENST00000401026 ANP32BQ92688 251 aaKnown RBP17.62■□□□□ 0.41
CCDC18-203ENST00000401026 HSP90AA1P07900 732 aaKnown RBP17.62■□□□□ 0.41
CCDC18-203ENST00000401026 HSPA5P11021 654 aaKnown RBP17.59■□□□□ 0.41
CCDC18-203ENST00000401026 CFDP1Q9UEE9 299 aaPredicted RBP17.59■□□□□ 0.41
CCDC18-203ENST00000401026 SMARCA2P51531 1590 aa17.58■□□□□ 0.41
CCDC18-203ENST00000401026 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.4
CCDC18-203ENST00000401026 ARHGAP35Q9NRY4 1499 aa17.57■□□□□ 0.4
CCDC18-203ENST00000401026 RGL3Q3MIN7 710 aa17.57■□□□□ 0.4
CCDC18-203ENST00000401026 CARD11Q9BXL7 1154 aa17.55■□□□□ 0.4
CCDC18-203ENST00000401026 WDR43Q15061 677 aaKnown RBP eCLIP17.55■□□□□ 0.4
CCDC18-203ENST00000401026 UPF2Q9HAU5 1272 aaKnown RBP17.55■□□□□ 0.4
CCDC18-203ENST00000401026 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
CCDC18-203ENST00000401026 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
CCDC18-203ENST00000401026 FOXD1Q16676 465 aa17.53■□□□□ 0.4
CCDC18-203ENST00000401026 CHGAP10645 457 aaKnown RBP17.52■□□□□ 0.39
CCDC18-203ENST00000401026 RTN4Q9NQC3 1192 aaKnown RBP17.52■□□□□ 0.39
CCDC18-203ENST00000401026 PLEKHD1A6NEE1 506 aa17.52■□□□□ 0.39
CCDC18-203ENST00000401026 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.52■□□□□ 0.39
CCDC18-203ENST00000401026 NEFMP07197 916 aa17.48■□□□□ 0.39
CCDC18-203ENST00000401026 FHOD3Q2V2M9 1422 aa17.45■□□□□ 0.38
CCDC18-203ENST00000401026 NOP58Q9Y2X3 529 aaKnown RBP17.44■□□□□ 0.38
CCDC18-203ENST00000401026 MPHOSPH9Q99550 1183 aa17.44■□□□□ 0.38
CCDC18-203ENST00000401026 L3MBTL2Q969R5 705 aa17.41■□□□□ 0.38
CCDC18-203ENST00000401026 FMN1Q68DA7 1419 aa17.41■□□□□ 0.38
CCDC18-203ENST00000401026 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
CCDC18-203ENST00000401026 KIF21BO75037 1637 aa17.4■□□□□ 0.38
CCDC18-203ENST00000401026 EIF4G1Q04637 1599 aaKnown RBP17.39■□□□□ 0.37
CCDC18-203ENST00000401026 ERICH6BQ5W0A0 696 aa17.38■□□□□ 0.37
CCDC18-203ENST00000401026 DCAF11Q8TEB1 546 aa17.38■□□□□ 0.37
CCDC18-203ENST00000401026 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
CCDC18-203ENST00000401026 KNSTRNQ9Y448 316 aa17.35■□□□□ 0.37
CCDC18-203ENST00000401026 PKD2Q13563 968 aa17.35■□□□□ 0.37
CCDC18-203ENST00000401026 CC2D1BQ5T0F9 858 aaKnown RBP17.35■□□□□ 0.37
CCDC18-203ENST00000401026 CADPSQ9ULU8 1353 aa17.35■□□□□ 0.37
CCDC18-203ENST00000401026 DDRGK1Q96HY6 314 aa17.34■□□□□ 0.37
CCDC18-203ENST00000401026 IGF1RP08069 1367 aa17.31■□□□□ 0.36
CCDC18-203ENST00000401026 DEKP35659 375 aaKnown RBP17.3■□□□□ 0.36
CCDC18-203ENST00000401026 PPM1GO15355 546 aaPredicted RBP17.28■□□□□ 0.36
CCDC18-203ENST00000401026 RGS3P49796 1198 aa17.28■□□□□ 0.36
CCDC18-203ENST00000401026 PHLDB1Q86UU1 1377 aa17.27■□□□□ 0.36
CCDC18-203ENST00000401026 ARAP1Q96P48 1450 aa17.27■□□□□ 0.36
CCDC18-203ENST00000401026 TRIM44Q96DX7 344 aaPredicted RBP17.26■□□□□ 0.35
CCDC18-203ENST00000401026 SYNJ1O43426 1573 aa17.26■□□□□ 0.35
CCDC18-203ENST00000401026 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
CCDC18-203ENST00000401026 CDCA8Q53HL2 280 aa17.25■□□□□ 0.35
CCDC18-203ENST00000401026 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
CCDC18-203ENST00000401026 NUDCQ9Y266 331 aa17.23■□□□□ 0.35
CCDC18-203ENST00000401026 CCDC18Q5T9S5 1454 aa17.22■□□□□ 0.35
CCDC18-203ENST00000401026 RRBP1Q9P2E9 1410 aaKnown RBP17.22■□□□□ 0.35
CCDC18-203ENST00000401026 SENP3Q9H4L4 574 aaPredicted RBP17.21■□□□□ 0.35
CCDC18-203ENST00000401026 RCAN3Q9UKA8 241 aa17.21■□□□□ 0.35
CCDC18-203ENST00000401026 STAG3Q9UJ98 1225 aa17.2■□□□□ 0.34
CCDC18-203ENST00000401026 TMF1P82094 1093 aa17.2■□□□□ 0.34
CCDC18-203ENST00000401026 BECN1Q14457 450 aa17.2■□□□□ 0.34
CCDC18-203ENST00000401026 NUP155O75694 1391 aa17.19■□□□□ 0.34
CCDC18-203ENST00000401026 NAP1L5Q96NT1 182 aaPredicted RBP17.19■□□□□ 0.34
CCDC18-203ENST00000401026 NPM1P06748 294 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCDC18-203ENST00000401026 LRRC9Q6ZRR7 1453 aa17.17■□□□□ 0.34
CCDC18-203ENST00000401026 RALBP1Q15311 655 aa17.16■□□□□ 0.34
CCDC18-203ENST00000401026 FRAT1Q92837 279 aaPredicted RBP17.16■□□□□ 0.34
CCDC18-203ENST00000401026 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
CCDC18-203ENST00000401026 PRXQ9BXM0 1461 aa17.15■□□□□ 0.34
CCDC18-203ENST00000401026 TNNT2P45379 298 aaPredicted RBP17.14■□□□□ 0.33
CCDC18-203ENST00000401026 ZBED9Q6R2W3 1325 aa17.14■□□□□ 0.33
CCDC18-203ENST00000401026 FGD6Q6ZV73 1430 aa17.13■□□□□ 0.33
CCDC18-203ENST00000401026 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
CCDC18-203ENST00000401026 ERICH3Q5RHP9 1530 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms