RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
LINC00649-202ENST00000400353 CTTNBP2Q8WZ74 1663 aa16.13■□□□□ 0.17
LINC00649-202ENST00000400353 HNRNPUL2Q1KMD3 747 aaKnown RBP16.12■□□□□ 0.17
LINC00649-202ENST00000400353 TIAM1Q13009 1591 aa16.11■□□□□ 0.17
LINC00649-202ENST00000400353 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
LINC00649-202ENST00000400353 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
LINC00649-202ENST00000400353 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
LINC00649-202ENST00000400353 WDR62O43379 1518 aa16.08■□□□□ 0.17
LINC00649-202ENST00000400353 PRKCSHP14314 528 aaPredicted RBP16.07■□□□□ 0.16
LINC00649-202ENST00000400353 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.16
LINC00649-202ENST00000400353 CFAP43Q8NDM7 1665 aa16.06■□□□□ 0.16
LINC00649-202ENST00000400353 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
LINC00649-202ENST00000400353 FYCO1Q9BQS8 1478 aa16.04■□□□□ 0.16
LINC00649-202ENST00000400353 CCNB3Q8WWL7 1395 aa16.03■□□□□ 0.16
LINC00649-202ENST00000400353 CLSPNQ9HAW4 1339 aa16.03■□□□□ 0.16
LINC00649-202ENST00000400353 PCF11O94913 1555 aaKnown RBP16.03■□□□□ 0.16
LINC00649-202ENST00000400353 LRRC9Q6ZRR7 1453 aa16.02■□□□□ 0.16
LINC00649-202ENST00000400353 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.16
LINC00649-202ENST00000400353 CASKIN1Q8WXD9 1431 aa16.02■□□□□ 0.15
LINC00649-202ENST00000400353 FMN1Q68DA7 1419 aa16■□□□□ 0.15
LINC00649-202ENST00000400353 SAMD9Q5K651 1589 aa15.99■□□□□ 0.15
LINC00649-202ENST00000400353 FHOD3Q2V2M9 1422 aa15.98■□□□□ 0.15
LINC00649-202ENST00000400353 PBRM1Q86U86 1689 aa15.97■□□□□ 0.15
LINC00649-202ENST00000400353 IFT140Q96RY7 1462 aa15.93■□□□□ 0.14
LINC00649-202ENST00000400353 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
LINC00649-202ENST00000400353 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
LINC00649-202ENST00000400353 P3H3Q8IVL6 736 aa15.91■□□□□ 0.14
LINC00649-202ENST00000400353 DHX57Q6P158 1386 aaKnown RBP15.91■□□□□ 0.14
LINC00649-202ENST00000400353 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
LINC00649-202ENST00000400353 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
LINC00649-202ENST00000400353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.89■□□□□ 0.13
LINC00649-202ENST00000400353 ZNF316A6NFI3 1004 aaPredicted RBP15.89■□□□□ 0.13
LINC00649-202ENST00000400353 ERICH6Q7L0X2 663 aa15.89■□□□□ 0.13
LINC00649-202ENST00000400353 PHLDB1Q86UU1 1377 aa15.87■□□□□ 0.13
LINC00649-202ENST00000400353 DIEXFQ68CQ4 756 aaKnown RBP15.85■□□□□ 0.13
LINC00649-202ENST00000400353 IQGAP2Q13576 1575 aa15.84■□□□□ 0.13
LINC00649-202ENST00000400353 ATP1B4Q9UN42 357 aaPredicted RBP15.84■□□□□ 0.13
LINC00649-202ENST00000400353 CCDC18Q5T9S5 1454 aa15.82■□□□□ 0.12
LINC00649-202ENST00000400353 SETD5Q9C0A6 1442 aa15.81■□□□□ 0.12
LINC00649-202ENST00000400353 EIF4G3O43432 1585 aaKnown RBP15.81■□□□□ 0.12
LINC00649-202ENST00000400353 EHBP1L1Q8N3D4 1523 aa15.8■□□□□ 0.12
LINC00649-202ENST00000400353 MTUS2Q5JR59 1369 aa15.79■□□□□ 0.12
LINC00649-202ENST00000400353 UGGT2Q9NYU1 1516 aa15.79■□□□□ 0.12
LINC00649-202ENST00000400353 HECW1Q76N89 1606 aa15.78■□□□□ 0.12
LINC00649-202ENST00000400353 RAB3GAP2Q9H2M9 1393 aa15.78■□□□□ 0.12
LINC00649-202ENST00000400353 FAM50AQ14320 339 aaKnown RBP15.77■□□□□ 0.11
LINC00649-202ENST00000400353 SUPT6HQ7KZ85 1726 aaKnown RBP15.76■□□□□ 0.11
LINC00649-202ENST00000400353 FGD6Q6ZV73 1430 aa15.76■□□□□ 0.11
LINC00649-202ENST00000400353 ITGAEP38570 1179 aa15.76■□□□□ 0.11
LINC00649-202ENST00000400353 LRRIQ1Q96JM4 1722 aa15.76■□□□□ 0.11
LINC00649-202ENST00000400353 KIAA0586Q9BVV6 1533 aa15.75■□□□□ 0.11
LINC00649-202ENST00000400353 MAGI1Q96QZ7 1491 aaPredicted RBP15.73■□□□□ 0.11
LINC00649-202ENST00000400353 NCOA2Q15596 1464 aa15.72■□□□□ 0.11
LINC00649-202ENST00000400353 MYOM3Q5VTT5 1437 aa15.71■□□□□ 0.11
LINC00649-202ENST00000400353 ARHGEF11O15085 1522 aa15.71■□□□□ 0.11
LINC00649-202ENST00000400353 GRIN2AQ12879 1464 aa15.71■□□□□ 0.1
LINC00649-202ENST00000400353 FBLN2P98095 1184 aa15.71■□□□□ 0.1
LINC00649-202ENST00000400353 MAPKBP1O60336 1514 aa15.68■□□□□ 0.1
LINC00649-202ENST00000400353 EPRSP07814 1512 aaKnown RBP15.68■□□□□ 0.1
LINC00649-202ENST00000400353 KIAA0556O60303 1618 aa15.68■□□□□ 0.1
LINC00649-202ENST00000400353 CHMP7Q8WUX9 453 aaPredicted RBP15.66■□□□□ 0.1
LINC00649-202ENST00000400353 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
LINC00649-202ENST00000400353 TCOF1Q13428 1488 aaKnown RBP15.64■□□□□ 0.09
LINC00649-202ENST00000400353 PTPN23Q9H3S7 1636 aa15.64■□□□□ 0.09
LINC00649-202ENST00000400353 DISP1Q96F81 1524 aa15.64■□□□□ 0.09
LINC00649-202ENST00000400353 MAGI3Q5TCQ9 1506 aa15.63■□□□□ 0.09
LINC00649-202ENST00000400353 TIMELESSQ9UNS1 1208 aa15.63■□□□□ 0.09
LINC00649-202ENST00000400353 HFM1A2PYH4 1435 aa15.62■□□□□ 0.09
LINC00649-202ENST00000400353 MIA2Q96PC5 1412 aa15.61■□□□□ 0.09
LINC00649-202ENST00000400353 CENPBP07199 599 aaPredicted RBP15.6■□□□□ 0.09
LINC00649-202ENST00000400353 RAPGEF6Q8TEU7 1601 aa15.6■□□□□ 0.09
LINC00649-202ENST00000400353 CDK13Q14004 1512 aaKnown RBP15.58■□□□□ 0.08
LINC00649-202ENST00000400353 NUP160Q12769 1436 aa15.58■□□□□ 0.08
LINC00649-202ENST00000400353 AKNAQ7Z591 1439 aa15.58■□□□□ 0.08
LINC00649-202ENST00000400353 CEP170Q5SW79 1584 aa15.57■□□□□ 0.08
LINC00649-202ENST00000400353 UACAQ9BZF9 1416 aa15.56■□□□□ 0.08
LINC00649-202ENST00000400353 PTPRKQ15262 1439 aa15.55■□□□□ 0.08
LINC00649-202ENST00000400353 CARMIL2Q6F5E8 1435 aa15.55■□□□□ 0.08
LINC00649-202ENST00000400353 ACIN1Q9UKV3 1341 aaKnown RBP15.54■□□□□ 0.08
LINC00649-202ENST00000400353 NAIPQ13075 1403 aa15.54■□□□□ 0.08
LINC00649-202ENST00000400353 NUP153P49790 1475 aaKnown RBP15.54■□□□□ 0.08
LINC00649-202ENST00000400353 CDK11AQ9UQ88 783 aaPredicted RBP15.54■□□□□ 0.08
LINC00649-202ENST00000400353 GCC2Q8IWJ2 1684 aa15.53■□□□□ 0.08
LINC00649-202ENST00000400353 CHD1O14646 1710 aa15.49■□□□□ 0.07
LINC00649-202ENST00000400353 MIER1Q8N108 512 aa15.48■□□□□ 0.07
LINC00649-202ENST00000400353 TROQ12816 1431 aaPredicted RBP15.47■□□□□ 0.07
LINC00649-202ENST00000400353 DAXXQ9UER7 740 aaPredicted RBP15.47■□□□□ 0.07
LINC00649-202ENST00000400353 ADCY10Q96PN6 1610 aa15.46■□□□□ 0.07
LINC00649-202ENST00000400353 JPH4Q96JJ6 628 aa15.45■□□□□ 0.06
LINC00649-202ENST00000400353 ROCK1Q13464 1354 aa15.45■□□□□ 0.06
LINC00649-202ENST00000400353 ITSN2Q9NZM3 1697 aa15.45■□□□□ 0.06
LINC00649-202ENST00000400353 SIN3AQ96ST3 1273 aa15.45■□□□□ 0.06
LINC00649-202ENST00000400353 SCAF1Q9H7N4 1312 aaKnown RBP15.44■□□□□ 0.06
LINC00649-202ENST00000400353 DNMT1P26358 1616 aaKnown RBP15.44■□□□□ 0.06
LINC00649-202ENST00000400353 NEUROD1Q13562 356 aa15.44■□□□□ 0.06
LINC00649-202ENST00000400353 BCL11AQ9H165 835 aa15.43■□□□□ 0.06
LINC00649-202ENST00000400353 DAPK1P53355 1430 aa15.42■□□□□ 0.06
LINC00649-202ENST00000400353 ABCA8O94911 1581 aa15.42■□□□□ 0.06
LINC00649-202ENST00000400353 TONSLQ96HA7 1378 aa15.42■□□□□ 0.06
LINC00649-202ENST00000400353 PPP1R15AO75807 674 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms