RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 JPH4Q96JJ6 628 aa25.22■■□□□ 1.63
SMARCE1-204ENST00000400122 KIAA0586Q9BVV6 1533 aa25.19■■□□□ 1.62
SMARCE1-204ENST00000400122 PRG4Q92954 1404 aaPredicted RBP25.19■■□□□ 1.62
SMARCE1-204ENST00000400122 CARMIL1Q5VZK9 1371 aa25.09■■□□□ 1.61
SMARCE1-204ENST00000400122 MAPKBP1O60336 1514 aa24.95■■□□□ 1.58
SMARCE1-204ENST00000400122 IQGAP2Q13576 1575 aa24.92■■□□□ 1.58
SMARCE1-204ENST00000400122 RAPGEF2Q9Y4G8 1499 aa24.91■■□□□ 1.58
SMARCE1-204ENST00000400122 CARMIL2Q6F5E8 1435 aa24.91■■□□□ 1.58
SMARCE1-204ENST00000400122 KIF13AQ9H1H9 1805 aa24.91■■□□□ 1.58
SMARCE1-204ENST00000400122 ADCY10Q96PN6 1610 aa24.9■■□□□ 1.58
SMARCE1-204ENST00000400122 NPM1P06748 294 aaKnown RBP eCLIP24.88■■□□□ 1.57
SMARCE1-204ENST00000400122 ABCC10Q5T3U5 1492 aa24.86■■□□□ 1.57
SMARCE1-204ENST00000400122 TNIKQ9UKE5 1360 aa24.86■■□□□ 1.57
SMARCE1-204ENST00000400122 PTPRGP23470 1445 aa24.85■■□□□ 1.57
SMARCE1-204ENST00000400122 UGGT2Q9NYU1 1516 aa24.83■■□□□ 1.57
SMARCE1-204ENST00000400122 UHRF1BP1LA0JNW5 1464 aa24.78■■□□□ 1.56
SMARCE1-204ENST00000400122 DISP1Q96F81 1524 aa24.78■■□□□ 1.56
SMARCE1-204ENST00000400122 DIP2BQ9P265 1576 aa24.76■■□□□ 1.55
SMARCE1-204ENST00000400122 PRXQ9BXM0 1461 aa24.74■■□□□ 1.55
SMARCE1-204ENST00000400122 ABCC2Q92887 1545 aa24.74■■□□□ 1.55
SMARCE1-204ENST00000400122 CTTNBP2Q8WZ74 1663 aa24.7■■□□□ 1.54
SMARCE1-204ENST00000400122 FAM69CQ0P6D2 419 aa24.7■■□□□ 1.54
SMARCE1-204ENST00000400122 UACAQ9BZF9 1416 aa24.69■■□□□ 1.54
SMARCE1-204ENST00000400122 KIAA0556O60303 1618 aa24.68■■□□□ 1.54
SMARCE1-204ENST00000400122 PLB1Q6P1J6 1458 aa24.66■■□□□ 1.54
SMARCE1-204ENST00000400122 GOLGA3Q08378 1498 aa24.64■■□□□ 1.54
SMARCE1-204ENST00000400122 KDM5BQ9UGL1 1544 aa24.64■■□□□ 1.53
SMARCE1-204ENST00000400122 GLI2P10070 1586 aa24.62■■□□□ 1.53
SMARCE1-204ENST00000400122 EEA1Q15075 1411 aa24.59■■□□□ 1.53
SMARCE1-204ENST00000400122 ASXL2Q76L83 1435 aa24.58■■□□□ 1.53
SMARCE1-204ENST00000400122 CSRNP3Q8WYN3 585 aa24.52■■□□□ 1.52
SMARCE1-204ENST00000400122 ZCCHC11Q5TAX3 1644 aaKnown RBP24.49■■□□□ 1.51
SMARCE1-204ENST00000400122 ABCA8O94911 1581 aa24.47■■□□□ 1.51
SMARCE1-204ENST00000400122 TSPOAP1O95153 1857 aa24.47■■□□□ 1.51
SMARCE1-204ENST00000400122 KDM6BO15054 1643 aa24.46■■□□□ 1.51
SMARCE1-204ENST00000400122 TTBK1Q5TCY1 1321 aaPredicted RBP24.46■■□□□ 1.51
SMARCE1-204ENST00000400122 EPRSP07814 1512 aaKnown RBP24.45■■□□□ 1.51
SMARCE1-204ENST00000400122 PPRC1Q5VV67 1664 aaKnown RBP24.43■■□□□ 1.5
SMARCE1-204ENST00000400122 MAP3K4Q9Y6R4 1608 aa24.43■■□□□ 1.5
SMARCE1-204ENST00000400122 WDR7Q9Y4E6 1490 aa24.41■■□□□ 1.5
SMARCE1-204ENST00000400122 FAM9AQ8IZU1 332 aaPredicted RBP24.41■■□□□ 1.5
SMARCE1-204ENST00000400122 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
SMARCE1-204ENST00000400122 SAMD9Q5K651 1589 aa24.38■■□□□ 1.49
SMARCE1-204ENST00000400122 TEX14Q8IWB6 1497 aa24.38■■□□□ 1.49
SMARCE1-204ENST00000400122 KIF21BO75037 1637 aa24.31■■□□□ 1.48
SMARCE1-204ENST00000400122 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
SMARCE1-204ENST00000400122 MAGI3Q5TCQ9 1506 aa24.29■■□□□ 1.48
SMARCE1-204ENST00000400122 ATP10BO94823 1461 aa24.23■■□□□ 1.47
SMARCE1-204ENST00000400122 EFCAB5A4FU69 1503 aa24.21■■□□□ 1.47
SMARCE1-204ENST00000400122 CD109Q6YHK3 1445 aa24.21■■□□□ 1.47
SMARCE1-204ENST00000400122 RAPGEF6Q8TEU7 1601 aa24.21■■□□□ 1.47
SMARCE1-204ENST00000400122 COL17A1Q9UMD9 1497 aaPredicted RBP24.2■■□□□ 1.47
SMARCE1-204ENST00000400122 PHLDB1Q86UU1 1377 aa24.16■■□□□ 1.46
SMARCE1-204ENST00000400122 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
SMARCE1-204ENST00000400122 ABCA9Q8IUA7 1624 aa24.13■■□□□ 1.45
SMARCE1-204ENST00000400122 P3H3Q8IVL6 736 aa24.13■■□□□ 1.45
SMARCE1-204ENST00000400122 NUP153P49790 1475 aaKnown RBP24.12■■□□□ 1.45
SMARCE1-204ENST00000400122 KDM4FA0A1W2PPD8 638 aa24.11■■□□□ 1.45
SMARCE1-204ENST00000400122 KCNH8Q96L42 1107 aa24.11■■□□□ 1.45
SMARCE1-204ENST00000400122 ARAP3Q8WWN8 1544 aa24.1■■□□□ 1.45
SMARCE1-204ENST00000400122 FHOD3Q2V2M9 1422 aa24.07■■□□□ 1.44
SMARCE1-204ENST00000400122 NEO1Q92859 1461 aa24.03■■□□□ 1.44
SMARCE1-204ENST00000400122 PLEKHD1A6NEE1 506 aa23.98■■□□□ 1.43
SMARCE1-204ENST00000400122 FMN1Q68DA7 1419 aa23.98■■□□□ 1.43
SMARCE1-204ENST00000400122 ADGRL1O94910 1474 aa23.96■■□□□ 1.43
SMARCE1-204ENST00000400122 UBTFP17480 764 aaKnown RBP23.94■■□□□ 1.42
SMARCE1-204ENST00000400122 ARID3CA6NKF2 412 aa23.93■■□□□ 1.42
SMARCE1-204ENST00000400122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.92■■□□□ 1.42
SMARCE1-204ENST00000400122 HNRNPUL2Q1KMD3 747 aaKnown RBP23.92■■□□□ 1.42
SMARCE1-204ENST00000400122 ARHGAP35Q9NRY4 1499 aa23.92■■□□□ 1.42
SMARCE1-204ENST00000400122 CFAP74Q9C0B2 1584 aa23.88■■□□□ 1.41
SMARCE1-204ENST00000400122 RANGAP1P46060 587 aaPredicted RBP23.88■■□□□ 1.41
SMARCE1-204ENST00000400122 HECW1Q76N89 1606 aa23.88■■□□□ 1.41
SMARCE1-204ENST00000400122 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.86■■□□□ 1.41
SMARCE1-204ENST00000400122 CDK11AQ9UQ88 783 aaPredicted RBP23.82■■□□□ 1.4
SMARCE1-204ENST00000400122 CDK13Q14004 1512 aaKnown RBP23.8■■□□□ 1.4
SMARCE1-204ENST00000400122 FRMPD1Q5SYB0 1578 aa23.8■■□□□ 1.4
SMARCE1-204ENST00000400122 FANCAO15360 1455 aa23.8■■□□□ 1.4
SMARCE1-204ENST00000400122 AKNAQ7Z591 1439 aa23.79■■□□□ 1.4
SMARCE1-204ENST00000400122 TTC37Q6PGP7 1564 aa23.78■■□□□ 1.4
SMARCE1-204ENST00000400122 RICTORQ6R327 1708 aa23.78■■□□□ 1.4
SMARCE1-204ENST00000400122 DENND4BO75064 1496 aaPredicted RBP23.77■■□□□ 1.4
SMARCE1-204ENST00000400122 PLCH2O75038 1416 aa23.76■■□□□ 1.39
SMARCE1-204ENST00000400122 RAPGEF3O95398 923 aa23.75■■□□□ 1.39
SMARCE1-204ENST00000400122 ZMYM4Q5VZL5 1548 aa23.74■■□□□ 1.39
SMARCE1-204ENST00000400122 MAGI2Q86UL8 1455 aa23.74■■□□□ 1.39
SMARCE1-204ENST00000400122 TROQ12816 1431 aaPredicted RBP23.72■■□□□ 1.39
SMARCE1-204ENST00000400122 CASKIN1Q8WXD9 1431 aa23.71■■□□□ 1.39
SMARCE1-204ENST00000400122 ADAMTSL3P82987 1691 aa23.7■■□□□ 1.39
SMARCE1-204ENST00000400122 ARHGEF40Q8TER5 1519 aa23.7■■□□□ 1.38
SMARCE1-204ENST00000400122 CCDC18Q5T9S5 1454 aa23.7■■□□□ 1.38
SMARCE1-204ENST00000400122 MYO5CQ9NQX4 1742 aa23.7■■□□□ 1.38
SMARCE1-204ENST00000400122 CLIP1P30622 1438 aa23.68■■□□□ 1.38
SMARCE1-204ENST00000400122 KIF14Q15058 1648 aa23.68■■□□□ 1.38
SMARCE1-204ENST00000400122 LRRIQ1Q96JM4 1722 aa23.66■■□□□ 1.38
SMARCE1-204ENST00000400122 EFCAB2Q5VUJ9 269 aa23.65■■□□□ 1.38
SMARCE1-204ENST00000400122 BCORL1Q5H9F3 1711 aa23.64■■□□□ 1.38
SMARCE1-204ENST00000400122 FYCO1Q9BQS8 1478 aa23.64■■□□□ 1.38
SMARCE1-204ENST00000400122 POGZQ7Z3K3 1410 aa23.63■■□□□ 1.37
SMARCE1-204ENST00000400122 EHMT2Q96KQ7 1210 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms