RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
CACNA1C-209ENST00000399603 ZBTB7CA1YPR0 619 aa16.52■□□□□ 0.23
CACNA1C-209ENST00000399603 ANP32EQ9BTT0 268 aa16.51■□□□□ 0.23
CACNA1C-209ENST00000399603 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
CACNA1C-209ENST00000399603 TNNT3P45378 269 aaPredicted RBP16.49■□□□□ 0.23
CACNA1C-209ENST00000399603 CLSTN1O94985 981 aa16.48■□□□□ 0.23
CACNA1C-209ENST00000399603 CHGAP10645 457 aaKnown RBP16.47■□□□□ 0.23
CACNA1C-209ENST00000399603 DDRGK1Q96HY6 314 aa16.46■□□□□ 0.23
CACNA1C-209ENST00000399603 PRM3Q9NNZ6 103 aa16.45■□□□□ 0.22
CACNA1C-209ENST00000399603 LAS1LQ9Y4W2 734 aaKnown RBP16.45■□□□□ 0.22
CACNA1C-209ENST00000399603 GOLGA6L6A8MZA4 724 aa16.42■□□□□ 0.22
CACNA1C-209ENST00000399603 STAG3Q9UJ98 1225 aa16.4■□□□□ 0.22
CACNA1C-209ENST00000399603 TMC1Q8TDI8 760 aa16.4■□□□□ 0.22
CACNA1C-209ENST00000399603 ESF1Q9H501 851 aaKnown RBP16.4■□□□□ 0.22
CACNA1C-209ENST00000399603 CHAF1AQ13111 956 aaPredicted RBP16.39■□□□□ 0.22
CACNA1C-209ENST00000399603 DDX10Q13206 875 aaKnown RBP16.38■□□□□ 0.21
CACNA1C-209ENST00000399603 WDR43Q15061 677 aaKnown RBP eCLIP16.38■□□□□ 0.21
CACNA1C-209ENST00000399603 CHIC2Q9UKJ5 165 aa16.37■□□□□ 0.21
CACNA1C-209ENST00000399603 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.36■□□□□ 0.21
CACNA1C-209ENST00000399603 CALRP27797 417 aaKnown RBP16.35■□□□□ 0.21
CACNA1C-209ENST00000399603 NRDCO43847 1150 aa16.34■□□□□ 0.21
CACNA1C-209ENST00000399603 PDE4CQ08493 712 aa16.34■□□□□ 0.21
CACNA1C-209ENST00000399603 NOC3LQ8WTT2 800 aaKnown RBP16.33■□□□□ 0.2
CACNA1C-209ENST00000399603 DRC7Q8IY82 874 aa16.32■□□□□ 0.2
CACNA1C-209ENST00000399603 NAP1L2Q9ULW6 460 aaPredicted RBP16.32■□□□□ 0.2
CACNA1C-209ENST00000399603 MSNP26038 577 aaKnown RBP16.32■□□□□ 0.2
CACNA1C-209ENST00000399603 PNNQ9H307 717 aaKnown RBP16.31■□□□□ 0.2
CACNA1C-209ENST00000399603 SENP3-EIF4A1A0A087X0R7 540 aa16.31■□□□□ 0.2
CACNA1C-209ENST00000399603 RSF1Q96T23 1441 aaPredicted RBP16.27■□□□□ 0.2
CACNA1C-209ENST00000399603 CASC1Q6TDU7 716 aa16.27■□□□□ 0.2
CACNA1C-209ENST00000399603 FBXO3Q9UK99 471 aa16.26■□□□□ 0.19
CACNA1C-209ENST00000399603 SENP3Q9H4L4 574 aaPredicted RBP16.26■□□□□ 0.19
CACNA1C-209ENST00000399603 PPM1GO15355 546 aaPredicted RBP16.25■□□□□ 0.19
CACNA1C-209ENST00000399603 FGD1P98174 961 aa16.25■□□□□ 0.19
CACNA1C-209ENST00000399603 MRS2Q9HD23 443 aa16.24■□□□□ 0.19
CACNA1C-209ENST00000399603 A0A0U1RQG5 324 aaPredicted RBP16.23■□□□□ 0.19
CACNA1C-209ENST00000399603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.19
CACNA1C-209ENST00000399603 HSP90AB1P08238 724 aaKnown RBP16.22■□□□□ 0.19
CACNA1C-209ENST00000399603 C14orf37Q86TY3 774 aa16.22■□□□□ 0.19
CACNA1C-209ENST00000399603 TONSLQ96HA7 1378 aa16.22■□□□□ 0.19
CACNA1C-209ENST00000399603 CHMP7Q8WUX9 453 aaPredicted RBP16.21■□□□□ 0.19
CACNA1C-209ENST00000399603 NPM1P06748 294 aaKnown RBP eCLIP16.21■□□□□ 0.19
CACNA1C-209ENST00000399603 GOLGA6L4A6NEF3 574 aa16.21■□□□□ 0.19
CACNA1C-209ENST00000399603 L1TD1Q5T7N2 865 aaKnown RBP16.19■□□□□ 0.18
CACNA1C-209ENST00000399603 PATL2C9JE40 543 aaKnown RBP16.19■□□□□ 0.18
CACNA1C-209ENST00000399603 ANO8Q9HCE9 1232 aaPredicted RBP16.18■□□□□ 0.18
CACNA1C-209ENST00000399603 SPRYD3Q8NCJ5 442 aa16.18■□□□□ 0.18
CACNA1C-209ENST00000399603 CLIP1P30622 1438 aa16.16■□□□□ 0.18
CACNA1C-209ENST00000399603 KIAA2012Q0VF49 1180 aa16.16■□□□□ 0.18
CACNA1C-209ENST00000399603 RGS3P49796 1198 aa16.15■□□□□ 0.18
CACNA1C-209ENST00000399603 KCNJ4P48050 445 aa16.14■□□□□ 0.17
CACNA1C-209ENST00000399603 ISY1Q9ULR0 285 aaKnown RBP16.14■□□□□ 0.17
CACNA1C-209ENST00000399603 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.17
CACNA1C-209ENST00000399603 DEKP35659 375 aaKnown RBP16.13■□□□□ 0.17
CACNA1C-209ENST00000399603 MTUS2Q5JR59 1369 aa16.13■□□□□ 0.17
CACNA1C-209ENST00000399603 NPHP1O15259 732 aa16.13■□□□□ 0.17
CACNA1C-209ENST00000399603 NOP58Q9Y2X3 529 aaKnown RBP16.12■□□□□ 0.17
CACNA1C-209ENST00000399603 MYO15BQ96JP2 1530 aa16.12■□□□□ 0.17
CACNA1C-209ENST00000399603 GOLGA6L1Q8N7Z2 621 aa16.11■□□□□ 0.17
CACNA1C-209ENST00000399603 FTSJ3Q8IY81 847 aaKnown RBP16.1■□□□□ 0.17
CACNA1C-209ENST00000399603 RRP7BPQ9NSQ0 103 aa16.1■□□□□ 0.17
CACNA1C-209ENST00000399603 HIRIP3Q9BW71 556 aaPredicted RBP16.1■□□□□ 0.17
CACNA1C-209ENST00000399603 KDM2AQ9Y2K7 1162 aa16.1■□□□□ 0.17
CACNA1C-209ENST00000399603 KCNH8Q96L42 1107 aa16.08■□□□□ 0.17
CACNA1C-209ENST00000399603 TSPY4P0CV99 314 aa16.08■□□□□ 0.17
CACNA1C-209ENST00000399603 TSPY10P0CW01 314 aa16.08■□□□□ 0.17
CACNA1C-209ENST00000399603 RB1CC1Q8TDY2 1594 aa16.08■□□□□ 0.16
CACNA1C-209ENST00000399603 WRNQ14191 1432 aaPredicted RBP eCLIP16.07■□□□□ 0.16
CACNA1C-209ENST00000399603 OS9Q13438 667 aaPredicted RBP16.06■□□□□ 0.16
CACNA1C-209ENST00000399603 PTMSP20962 102 aa16.06■□□□□ 0.16
CACNA1C-209ENST00000399603 SETQ01105 290 aaPredicted RBP16.06■□□□□ 0.16
CACNA1C-209ENST00000399603 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
CACNA1C-209ENST00000399603 TAF7LQ5H9L4 462 aa16.03■□□□□ 0.16
CACNA1C-209ENST00000399603 GOLGA2Q08379 1002 aa16.03■□□□□ 0.16
CACNA1C-209ENST00000399603 GZF1Q9H116 711 aaPredicted RBP16.03■□□□□ 0.16
CACNA1C-209ENST00000399603 CEP162Q5TB80 1403 aa16.03■□□□□ 0.16
CACNA1C-209ENST00000399603 HAP1P54257 671 aaPredicted RBP16.01■□□□□ 0.15
CACNA1C-209ENST00000399603 GNL2Q13823 731 aaKnown RBP16.01■□□□□ 0.15
CACNA1C-209ENST00000399603 CECR2Q9BXF3 1484 aa16.01■□□□□ 0.15
CACNA1C-209ENST00000399603 BAZ1BQ9UIG0 1483 aaKnown RBP16.01■□□□□ 0.15
CACNA1C-209ENST00000399603 NEUROD2Q15784 382 aa16■□□□□ 0.15
CACNA1C-209ENST00000399603 HSCBQ8IWL3 235 aa15.99■□□□□ 0.15
CACNA1C-209ENST00000399603 SUPT16HQ9Y5B9 1047 aaKnown RBP15.99■□□□□ 0.15
CACNA1C-209ENST00000399603 GOLGA3Q08378 1498 aa15.98■□□□□ 0.15
CACNA1C-209ENST00000399603 MIER1Q8N108 512 aa15.97■□□□□ 0.15
CACNA1C-209ENST00000399603 FRAT1Q92837 279 aaPredicted RBP15.97■□□□□ 0.15
CACNA1C-209ENST00000399603 VSIG10Q8N0Z9 540 aa15.97■□□□□ 0.15
CACNA1C-209ENST00000399603 CREBRFQ8IUR6 639 aa15.96■□□□□ 0.15
CACNA1C-209ENST00000399603 PLEKHD1A6NEE1 506 aa15.96■□□□□ 0.14
CACNA1C-209ENST00000399603 WWC1Q8IX03 1113 aa15.95■□□□□ 0.14
CACNA1C-209ENST00000399603 EEA1Q15075 1411 aa15.91■□□□□ 0.14
CACNA1C-209ENST00000399603 HSP90AA2PQ14568 343 aaPredicted RBP15.9■□□□□ 0.14
CACNA1C-209ENST00000399603 KIF27Q86VH2 1401 aa15.89■□□□□ 0.13
CACNA1C-209ENST00000399603 RGL3Q3MIN7 710 aa15.89■□□□□ 0.13
CACNA1C-209ENST00000399603 TNIKQ9UKE5 1360 aa15.88■□□□□ 0.13
CACNA1C-209ENST00000399603 NACADO15069 1562 aa15.88■□□□□ 0.13
CACNA1C-209ENST00000399603 CEP89Q96ST8 783 aa15.87■□□□□ 0.13
CACNA1C-209ENST00000399603 CFDP1Q9UEE9 299 aaPredicted RBP15.87■□□□□ 0.13
CACNA1C-209ENST00000399603 RRP12Q5JTH9 1297 aaKnown RBP15.87■□□□□ 0.13
CACNA1C-209ENST00000399603 ZNF771Q7L3S4 317 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms