RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 CARMIL1Q5VZK9 1371 aa36.81■■■■□ 3.48
RUNX1-204ENST00000399237 PRG4Q92954 1404 aaPredicted RBP36.8■■■■□ 3.48
RUNX1-204ENST00000399237 JPH4Q96JJ6 628 aa36.76■■■■□ 3.48
RUNX1-204ENST00000399237 KIAA0586Q9BVV6 1533 aa36.75■■■■□ 3.47
RUNX1-204ENST00000399237 RAPGEF2Q9Y4G8 1499 aa36.57■■■■□ 3.45
RUNX1-204ENST00000399237 IQGAP2Q13576 1575 aa36.53■■■■□ 3.44
RUNX1-204ENST00000399237 ADCY10Q96PN6 1610 aa36.42■■■■□ 3.42
RUNX1-204ENST00000399237 PRXQ9BXM0 1461 aa36.41■■■■□ 3.42
RUNX1-204ENST00000399237 CTTNBP2Q8WZ74 1663 aa36.37■■■■□ 3.41
RUNX1-204ENST00000399237 DISP1Q96F81 1524 aa36.37■■■■□ 3.41
RUNX1-204ENST00000399237 UGGT2Q9NYU1 1516 aa36.33■■■■□ 3.41
RUNX1-204ENST00000399237 NPM1P06748 294 aaKnown RBP eCLIP36.31■■■■□ 3.4
RUNX1-204ENST00000399237 CARMIL2Q6F5E8 1435 aa36.27■■■■□ 3.4
RUNX1-204ENST00000399237 KIF13AQ9H1H9 1805 aa36.26■■■■□ 3.39
RUNX1-204ENST00000399237 TNIKQ9UKE5 1360 aa36.25■■■■□ 3.39
RUNX1-204ENST00000399237 PTPRGP23470 1445 aa36.25■■■■□ 3.39
RUNX1-204ENST00000399237 MAPKBP1O60336 1514 aa36.24■■■■□ 3.39
RUNX1-204ENST00000399237 KIAA0556O60303 1618 aa36.24■■■■□ 3.39
RUNX1-204ENST00000399237 ABCC10Q5T3U5 1492 aa36.23■■■■□ 3.39
RUNX1-204ENST00000399237 FAM69CQ0P6D2 419 aa36.21■■■■□ 3.39
RUNX1-204ENST00000399237 TTBK1Q5TCY1 1321 aaPredicted RBP36.18■■■■□ 3.38
RUNX1-204ENST00000399237 CSRNP3Q8WYN3 585 aa36.14■■■■□ 3.38
RUNX1-204ENST00000399237 DIP2BQ9P265 1576 aa36.12■■■■□ 3.37
RUNX1-204ENST00000399237 AEBP2Q6ZN18 517 aaPredicted RBP36.11■■■■□ 3.37
RUNX1-204ENST00000399237 EEA1Q15075 1411 aa36.09■■■■□ 3.37
RUNX1-204ENST00000399237 CHIC1Q5VXU3 224 aa36.07■■■■□ 3.36
RUNX1-204ENST00000399237 ABCC2Q92887 1545 aa36.05■■■■□ 3.36
RUNX1-204ENST00000399237 UHRF1BP1LA0JNW5 1464 aa36.05■■■■□ 3.36
RUNX1-204ENST00000399237 UACAQ9BZF9 1416 aa36.02■■■■□ 3.36
RUNX1-204ENST00000399237 FAM9AQ8IZU1 332 aaPredicted RBP35.99■■■■□ 3.35
RUNX1-204ENST00000399237 GOLGA3Q08378 1498 aa35.96■■■■□ 3.35
RUNX1-204ENST00000399237 KIF21BO75037 1637 aa35.91■■■■□ 3.34
RUNX1-204ENST00000399237 KDM5BQ9UGL1 1544 aa35.91■■■■□ 3.34
RUNX1-204ENST00000399237 PLB1Q6P1J6 1458 aa35.91■■■■□ 3.34
RUNX1-204ENST00000399237 ZCCHC11Q5TAX3 1644 aaKnown RBP35.9■■■■□ 3.34
RUNX1-204ENST00000399237 SAMD9Q5K651 1589 aa35.88■■■■□ 3.33
RUNX1-204ENST00000399237 ABCA8O94911 1581 aa35.87■■■■□ 3.33
RUNX1-204ENST00000399237 ASXL2Q76L83 1435 aa35.86■■■■□ 3.33
RUNX1-204ENST00000399237 KDM6BO15054 1643 aa35.79■■■■□ 3.32
RUNX1-204ENST00000399237 TSPOAP1O95153 1857 aa35.78■■■■□ 3.32
RUNX1-204ENST00000399237 P3H3Q8IVL6 736 aa35.76■■■■□ 3.32
RUNX1-204ENST00000399237 GLI2P10070 1586 aa35.72■■■■□ 3.31
RUNX1-204ENST00000399237 PPRC1Q5VV67 1664 aaKnown RBP35.71■■■■□ 3.31
RUNX1-204ENST00000399237 EPRSP07814 1512 aaKnown RBP35.67■■■■□ 3.3
RUNX1-204ENST00000399237 MAP3K4Q9Y6R4 1608 aa35.61■■■■□ 3.29
RUNX1-204ENST00000399237 WDR7Q9Y4E6 1490 aa35.61■■■■□ 3.29
RUNX1-204ENST00000399237 RANGAP1P46060 587 aaPredicted RBP35.61■■■■□ 3.29
RUNX1-204ENST00000399237 FHOD3Q2V2M9 1422 aa35.6■■■■□ 3.29
RUNX1-204ENST00000399237 EHMT2Q96KQ7 1210 aa35.6■■■■□ 3.29
RUNX1-204ENST00000399237 RAPGEF6Q8TEU7 1601 aa35.58■■■■□ 3.29
RUNX1-204ENST00000399237 EFCAB5A4FU69 1503 aa35.53■■■■□ 3.28
RUNX1-204ENST00000399237 ATP10BO94823 1461 aa35.53■■■■□ 3.28
RUNX1-204ENST00000399237 ARID3CA6NKF2 412 aa35.5■■■■□ 3.27
RUNX1-204ENST00000399237 NUP153P49790 1475 aaKnown RBP35.46■■■■□ 3.27
RUNX1-204ENST00000399237 KDM4FA0A1W2PPD8 638 aa35.45■■■■□ 3.27
RUNX1-204ENST00000399237 TEX14Q8IWB6 1497 aa35.44■■■■□ 3.26
RUNX1-204ENST00000399237 COL17A1Q9UMD9 1497 aaPredicted RBP35.42■■■■□ 3.26
RUNX1-204ENST00000399237 UBTFP17480 764 aaKnown RBP35.42■■■■□ 3.26
RUNX1-204ENST00000399237 CFAP43Q8NDM7 1665 aa35.4■■■■□ 3.26
RUNX1-204ENST00000399237 ARHGAP35Q9NRY4 1499 aa35.38■■■■□ 3.25
RUNX1-204ENST00000399237 KCNH8Q96L42 1107 aa35.35■■■■□ 3.25
RUNX1-204ENST00000399237 CD109Q6YHK3 1445 aa35.29■■■■□ 3.24
RUNX1-204ENST00000399237 MAGI3Q5TCQ9 1506 aa35.27■■■■□ 3.24
RUNX1-204ENST00000399237 ABCA9Q8IUA7 1624 aa35.26■■■■□ 3.24
RUNX1-204ENST00000399237 CDK13Q14004 1512 aaKnown RBP35.21■■■■□ 3.23
RUNX1-204ENST00000399237 ADGRL1O94910 1474 aa35.19■■■■□ 3.22
RUNX1-204ENST00000399237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.16■■■■□ 3.22
RUNX1-204ENST00000399237 HNRNPUL2Q1KMD3 747 aaKnown RBP35.16■■■■□ 3.22
RUNX1-204ENST00000399237 FMN1Q68DA7 1419 aa35.14■■■■□ 3.22
RUNX1-204ENST00000399237 LRRIQ1Q96JM4 1722 aa35.12■■■■□ 3.21
RUNX1-204ENST00000399237 HECW1Q76N89 1606 aa35.12■■■■□ 3.21
RUNX1-204ENST00000399237 TTC37Q6PGP7 1564 aa35.04■■■■□ 3.2
RUNX1-204ENST00000399237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.03■■■■□ 3.23e-6■□□□□ 10
RUNX1-204ENST00000399237 PCF11O94913 1555 aaKnown RBP35.01■■■■□ 3.2
RUNX1-204ENST00000399237 PLEKHD1A6NEE1 506 aa35■■■■□ 3.19
RUNX1-204ENST00000399237 ARAP3Q8WWN8 1544 aa34.98■■■■□ 3.19
RUNX1-204ENST00000399237 ATP1B4Q9UN42 357 aaPredicted RBP34.94■■■■□ 3.18
RUNX1-204ENST00000399237 CLIP1P30622 1438 aa34.93■■■■□ 3.18
RUNX1-204ENST00000399237 NEO1Q92859 1461 aa34.91■■■■□ 3.18
RUNX1-204ENST00000399237 KIF14Q15058 1648 aa34.89■■■■□ 3.18
RUNX1-204ENST00000399237 FRMPD1Q5SYB0 1578 aa34.89■■■■□ 3.18
RUNX1-204ENST00000399237 CASKIN1Q8WXD9 1431 aa34.89■■■■□ 3.18
RUNX1-204ENST00000399237 PHLDB1Q86UU1 1377 aa34.87■■■■□ 3.17
RUNX1-204ENST00000399237 RAPGEF3O95398 923 aa34.81■■■■□ 3.16
RUNX1-204ENST00000399237 TROQ12816 1431 aaPredicted RBP34.8■■■■□ 3.16
RUNX1-204ENST00000399237 FANCAO15360 1455 aa34.79■■■■□ 3.16
RUNX1-204ENST00000399237 FYCO1Q9BQS8 1478 aa34.79■■■■□ 3.16
RUNX1-204ENST00000399237 CFAP74Q9C0B2 1584 aa34.78■■■■□ 3.16
RUNX1-204ENST00000399237 RICTORQ6R327 1708 aa34.77■■■■□ 3.16
RUNX1-204ENST00000399237 MYO5CQ9NQX4 1742 aa34.76■■■■□ 3.16
RUNX1-204ENST00000399237 CCDC18Q5T9S5 1454 aa34.76■■■■□ 3.15
RUNX1-204ENST00000399237 AKNAQ7Z591 1439 aa34.75■■■■□ 3.15
RUNX1-204ENST00000399237 PLCH2O75038 1416 aa34.72■■■■□ 3.15
RUNX1-204ENST00000399237 CEP162Q5TB80 1403 aa34.72■■■■□ 3.15
RUNX1-204ENST00000399237 CDK11AQ9UQ88 783 aaPredicted RBP34.69■■■■□ 3.14
RUNX1-204ENST00000399237 HECW2Q9P2P5 1572 aa34.67■■■■□ 3.14
RUNX1-204ENST00000399237 DENND4BO75064 1496 aaPredicted RBP34.66■■■■□ 3.14
RUNX1-204ENST00000399237 CDC42BPBQ9Y5S2 1711 aa34.62■■■■□ 3.13
RUNX1-204ENST00000399237 LOC105371045A0A1W2PR82 267 aa34.62■■■■□ 3.13
RUNX1-204ENST00000399237 ZMYM4Q5VZL5 1548 aa34.59■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms