RNA–Protein interactions for RNA: ENST00000399100.6

SEC24B-202, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEC24B, Length 3,780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-202ENST00000399100 MAPKBP1O60336 1514 aa19.98■□□□□ 0.79
SEC24B-202ENST00000399100 SNAPC4Q5SXM2 1469 aa19.98■□□□□ 0.79
SEC24B-202ENST00000399100 LRRC9Q6ZRR7 1453 aa19.97■□□□□ 0.79
SEC24B-202ENST00000399100 KANK4Q5T7N3 995 aaPredicted RBP19.96■□□□□ 0.79
SEC24B-202ENST00000399100 NESP48681 1621 aa19.96■□□□□ 0.79
SEC24B-202ENST00000399100 PBRM1Q86U86 1689 aa19.95■□□□□ 0.78
SEC24B-202ENST00000399100 FYCO1Q9BQS8 1478 aa19.94■□□□□ 0.78
SEC24B-202ENST00000399100 CARMIL1Q5VZK9 1371 aa19.94■□□□□ 0.78
SEC24B-202ENST00000399100 THOC2Q8NI27 1593 aaKnown RBP19.93■□□□□ 0.78
SEC24B-202ENST00000399100 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
SEC24B-202ENST00000399100 RAD54L2Q9Y4B4 1467 aa19.91■□□□□ 0.78
SEC24B-202ENST00000399100 ARHGEF11O15085 1522 aa19.89■□□□□ 0.78
SEC24B-202ENST00000399100 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.87■□□□□ 0.77
SEC24B-202ENST00000399100 CASKIN1Q8WXD9 1431 aa19.85■□□□□ 0.77
SEC24B-202ENST00000399100 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.77
SEC24B-202ENST00000399100 GRIN2BQ13224 1484 aa19.81■□□□□ 0.76
SEC24B-202ENST00000399100 FHAD1B1AJZ9 1412 aa19.8■□□□□ 0.76
SEC24B-202ENST00000399100 ZNF316A6NFI3 1004 aaPredicted RBP19.79■□□□□ 0.76
SEC24B-202ENST00000399100 PHLDB1Q86UU1 1377 aa19.77■□□□□ 0.76
SEC24B-202ENST00000399100 DIEXFQ68CQ4 756 aaKnown RBP19.77■□□□□ 0.76
SEC24B-202ENST00000399100 ADAMTS12P58397 1594 aa19.76■□□□□ 0.75
SEC24B-202ENST00000399100 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
SEC24B-202ENST00000399100 GCC2Q8IWJ2 1684 aa19.7■□□□□ 0.74
SEC24B-202ENST00000399100 MAGI3Q5TCQ9 1506 aa19.7■□□□□ 0.74
SEC24B-202ENST00000399100 KDM5BQ9UGL1 1544 aa19.67■□□□□ 0.74
SEC24B-202ENST00000399100 UGGT2Q9NYU1 1516 aa19.66■□□□□ 0.74
SEC24B-202ENST00000399100 GAPVD1Q14C86 1478 aa19.66■□□□□ 0.74
SEC24B-202ENST00000399100 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
SEC24B-202ENST00000399100 NEUROD1Q13562 356 aa19.65■□□□□ 0.74
SEC24B-202ENST00000399100 WDR62O43379 1518 aa19.65■□□□□ 0.74
SEC24B-202ENST00000399100 SUPT6HQ7KZ85 1726 aaKnown RBP19.65■□□□□ 0.74
SEC24B-202ENST00000399100 FHOD3Q2V2M9 1422 aa19.64■□□□□ 0.74
SEC24B-202ENST00000399100 TCOF1Q13428 1488 aaKnown RBP19.63■□□□□ 0.73
SEC24B-202ENST00000399100 PTPN23Q9H3S7 1636 aa19.62■□□□□ 0.73
SEC24B-202ENST00000399100 RAB3GAP2Q9H2M9 1393 aa19.62■□□□□ 0.73
SEC24B-202ENST00000399100 EHBP1L1Q8N3D4 1523 aa19.61■□□□□ 0.73
SEC24B-202ENST00000399100 PDS5BQ9NTI5 1447 aa19.6■□□□□ 0.73
SEC24B-202ENST00000399100 FMN1Q68DA7 1419 aa19.6■□□□□ 0.73
SEC24B-202ENST00000399100 SETD5Q9C0A6 1442 aa19.59■□□□□ 0.73
SEC24B-202ENST00000399100 IQGAP2Q13576 1575 aa19.56■□□□□ 0.72
SEC24B-202ENST00000399100 HECW1Q76N89 1606 aa19.56■□□□□ 0.72
SEC24B-202ENST00000399100 PTPRKQ15262 1439 aa19.55■□□□□ 0.72
SEC24B-202ENST00000399100 DENND4BO75064 1496 aaPredicted RBP19.55■□□□□ 0.72
SEC24B-202ENST00000399100 FGD6Q6ZV73 1430 aa19.55■□□□□ 0.72
SEC24B-202ENST00000399100 APLP2Q06481 763 aa19.54■□□□□ 0.72
SEC24B-202ENST00000399100 MRC2Q9UBG0 1479 aa19.51■□□□□ 0.71
SEC24B-202ENST00000399100 HFM1A2PYH4 1435 aa19.51■□□□□ 0.71
SEC24B-202ENST00000399100 CCDC18Q5T9S5 1454 aa19.5■□□□□ 0.71
SEC24B-202ENST00000399100 ADCY10Q96PN6 1610 aa19.49■□□□□ 0.71
SEC24B-202ENST00000399100 AKNAQ7Z591 1439 aa19.48■□□□□ 0.71
SEC24B-202ENST00000399100 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
SEC24B-202ENST00000399100 KIAA0556O60303 1618 aa19.48■□□□□ 0.71
SEC24B-202ENST00000399100 NCOA2Q15596 1464 aa19.47■□□□□ 0.71
SEC24B-202ENST00000399100 MIER1Q8N108 512 aa19.46■□□□□ 0.71
SEC24B-202ENST00000399100 EIF4G3O43432 1585 aaKnown RBP19.45■□□□□ 0.7
SEC24B-202ENST00000399100 KDM6BO15054 1643 aa19.45■□□□□ 0.7
SEC24B-202ENST00000399100 DISP1Q96F81 1524 aa19.44■□□□□ 0.7
SEC24B-202ENST00000399100 MYOM3Q5VTT5 1437 aa19.44■□□□□ 0.7
SEC24B-202ENST00000399100 CROCC2H7BZ55 1655 aa19.43■□□□□ 0.7
SEC24B-202ENST00000399100 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
SEC24B-202ENST00000399100 NAIPQ13075 1403 aa19.41■□□□□ 0.7
SEC24B-202ENST00000399100 POLR1AO95602 1720 aaPredicted RBP19.41■□□□□ 0.7
SEC24B-202ENST00000399100 EPRSP07814 1512 aaKnown RBP19.39■□□□□ 0.7
SEC24B-202ENST00000399100 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
SEC24B-202ENST00000399100 DNMT1P26358 1616 aaKnown RBP19.38■□□□□ 0.69
SEC24B-202ENST00000399100 UACAQ9BZF9 1416 aa19.36■□□□□ 0.69
SEC24B-202ENST00000399100 RAPGEF6Q8TEU7 1601 aa19.35■□□□□ 0.69
SEC24B-202ENST00000399100 TIMELESSQ9UNS1 1208 aa19.34■□□□□ 0.69
SEC24B-202ENST00000399100 CEP170Q5SW79 1584 aa19.33■□□□□ 0.69
SEC24B-202ENST00000399100 ZNF608Q9ULD9 1512 aaPredicted RBP19.32■□□□□ 0.68
SEC24B-202ENST00000399100 ADGBQ8N7X0 1667 aa19.32■□□□□ 0.68
SEC24B-202ENST00000399100 MIA2Q96PC5 1412 aa19.31■□□□□ 0.68
SEC24B-202ENST00000399100 MYT1Q01538 1121 aa19.31■□□□□ 0.68
SEC24B-202ENST00000399100 KIAA0586Q9BVV6 1533 aa19.3■□□□□ 0.68
SEC24B-202ENST00000399100 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
SEC24B-202ENST00000399100 NUP153P49790 1475 aaKnown RBP19.27■□□□□ 0.68
SEC24B-202ENST00000399100 CDK13Q14004 1512 aaKnown RBP19.27■□□□□ 0.68
SEC24B-202ENST00000399100 CENPBP07199 599 aaPredicted RBP19.26■□□□□ 0.67
SEC24B-202ENST00000399100 GRIN2AQ12879 1464 aa19.26■□□□□ 0.67
SEC24B-202ENST00000399100 GTF3C3Q9Y5Q9 886 aa19.26■□□□□ 0.67
SEC24B-202ENST00000399100 ITSN2Q9NZM3 1697 aa19.24■□□□□ 0.67
SEC24B-202ENST00000399100 MAGI1Q96QZ7 1491 aaPredicted RBP19.22■□□□□ 0.67
SEC24B-202ENST00000399100 CDC42BPAQ5VT25 1732 aa19.21■□□□□ 0.67
SEC24B-202ENST00000399100 PPP1R15AO75807 674 aaPredicted RBP19.19■□□□□ 0.66
SEC24B-202ENST00000399100 NUP160Q12769 1436 aa19.19■□□□□ 0.66
SEC24B-202ENST00000399100 ABCA8O94911 1581 aa19.19■□□□□ 0.66
SEC24B-202ENST00000399100 ROCK1Q13464 1354 aa19.17■□□□□ 0.66
SEC24B-202ENST00000399100 P3H3Q8IVL6 736 aa19.15■□□□□ 0.66
SEC24B-202ENST00000399100 ADGRL2O95490 1459 aa19.15■□□□□ 0.66
SEC24B-202ENST00000399100 KIF14Q15058 1648 aa19.14■□□□□ 0.66
SEC24B-202ENST00000399100 MTUS2Q5JR59 1369 aa19.14■□□□□ 0.65
SEC24B-202ENST00000399100 SHROOM2Q13796 1616 aa19.12■□□□□ 0.65
SEC24B-202ENST00000399100 TEX14Q8IWB6 1497 aa19.12■□□□□ 0.65
SEC24B-202ENST00000399100 SYNJ2O15056 1496 aa19.11■□□□□ 0.65
SEC24B-202ENST00000399100 MBD5Q9P267 1494 aa19.11■□□□□ 0.65
SEC24B-202ENST00000399100 DAPK1P53355 1430 aa19.1■□□□□ 0.65
SEC24B-202ENST00000399100 KDM5DQ9BY66 1539 aa19.08■□□□□ 0.65
SEC24B-202ENST00000399100 SIN3AQ96ST3 1273 aa19.08■□□□□ 0.64
SEC24B-202ENST00000399100 ABCC5O15440 1437 aa19.08■□□□□ 0.64
SEC24B-202ENST00000399100 ABCC10Q5T3U5 1492 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms