RNA–Protein interactions for RNA: ENST00000398486.2

KRT40-202, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-202ENST00000398486 CHMP7Q8WUX9 453 aaPredicted RBP21.04■□□□□ 0.96
KRT40-202ENST00000398486 CEP162Q5TB80 1403 aa21.02■□□□□ 0.95
KRT40-202ENST00000398486 FBLN2P98095 1184 aa21.01■□□□□ 0.95
KRT40-202ENST00000398486 IQGAP2Q13576 1575 aa20.99■□□□□ 0.95
KRT40-202ENST00000398486 KIAA0586Q9BVV6 1533 aa20.95■□□□□ 0.94
KRT40-202ENST00000398486 CLIP1P30622 1438 aa20.91■□□□□ 0.94
KRT40-202ENST00000398486 CLASP1Q7Z460 1538 aa20.91■□□□□ 0.94
KRT40-202ENST00000398486 SAMD9Q5K651 1589 aa20.89■□□□□ 0.94
KRT40-202ENST00000398486 ARHGAP35Q9NRY4 1499 aa20.89■□□□□ 0.93
KRT40-202ENST00000398486 UGGT2Q9NYU1 1516 aa20.88■□□□□ 0.93
KRT40-202ENST00000398486 RANGAP1P46060 587 aaPredicted RBP20.87■□□□□ 0.93
KRT40-202ENST00000398486 SHROOM2Q13796 1616 aa20.85■□□□□ 0.93
KRT40-202ENST00000398486 EFCAB5A4FU69 1503 aa20.85■□□□□ 0.93
KRT40-202ENST00000398486 ARAP1Q96P48 1450 aa20.84■□□□□ 0.93
KRT40-202ENST00000398486 DISP1Q96F81 1524 aa20.82■□□□□ 0.92
KRT40-202ENST00000398486 KIAA0556O60303 1618 aa20.8■□□□□ 0.92
KRT40-202ENST00000398486 FHOD3Q2V2M9 1422 aa20.77■□□□□ 0.91
KRT40-202ENST00000398486 JPH4Q96JJ6 628 aa20.74■□□□□ 0.91
KRT40-202ENST00000398486 ERCC6L2Q5T890 1561 aa20.74■□□□□ 0.91
KRT40-202ENST00000398486 OSCARQ8IYS5 282 aa20.71■□□□□ 0.91
KRT40-202ENST00000398486 P3H3Q8IVL6 736 aa20.7■□□□□ 0.9
KRT40-202ENST00000398486 VPS8Q8N3P4 1428 aa20.69■□□□□ 0.9
KRT40-202ENST00000398486 PRG4Q92954 1404 aaPredicted RBP20.69■□□□□ 0.9
KRT40-202ENST00000398486 PCF11O94913 1555 aaKnown RBP20.65■□□□□ 0.9
KRT40-202ENST00000398486 CARMIL2Q6F5E8 1435 aa20.64■□□□□ 0.9
KRT40-202ENST00000398486 FMN1Q68DA7 1419 aa20.6■□□□□ 0.89
KRT40-202ENST00000398486 LRRIQ1Q96JM4 1722 aa20.57■□□□□ 0.88
KRT40-202ENST00000398486 FYCO1Q9BQS8 1478 aa20.55■□□□□ 0.88
KRT40-202ENST00000398486 CASKIN1Q8WXD9 1431 aa20.54■□□□□ 0.88
KRT40-202ENST00000398486 RAPGEF6Q8TEU7 1601 aa20.53■□□□□ 0.88
KRT40-202ENST00000398486 ABCA8O94911 1581 aa20.52■□□□□ 0.88
KRT40-202ENST00000398486 ARHGEF11O15085 1522 aa20.51■□□□□ 0.87
KRT40-202ENST00000398486 PLB1Q6P1J6 1458 aa20.51■□□□□ 0.87
KRT40-202ENST00000398486 HECW1Q76N89 1606 aa20.5■□□□□ 0.87
KRT40-202ENST00000398486 TTBK1Q5TCY1 1321 aaPredicted RBP20.49■□□□□ 0.87
KRT40-202ENST00000398486 PTPRGP23470 1445 aa20.49■□□□□ 0.87
KRT40-202ENST00000398486 CFAP43Q8NDM7 1665 aa20.49■□□□□ 0.87
KRT40-202ENST00000398486 NUP153P49790 1475 aaKnown RBP20.47■□□□□ 0.87
KRT40-202ENST00000398486 RIMBP3CA6NJZ7 1639 aa20.47■□□□□ 0.87
KRT40-202ENST00000398486 RIMBP3BA6NNM3 1639 aa20.47■□□□□ 0.87
KRT40-202ENST00000398486 RIMBP3Q9UFD9 1639 aa20.47■□□□□ 0.87
KRT40-202ENST00000398486 TIAM1Q13009 1591 aa20.45■□□□□ 0.86
KRT40-202ENST00000398486 MAP3K1Q13233 1512 aa20.41■□□□□ 0.86
KRT40-202ENST00000398486 CDK13Q14004 1512 aaKnown RBP20.41■□□□□ 0.86
KRT40-202ENST00000398486 ABCC2Q92887 1545 aa20.41■□□□□ 0.86
KRT40-202ENST00000398486 EPRSP07814 1512 aaKnown RBP20.41■□□□□ 0.86
KRT40-202ENST00000398486 UACAQ9BZF9 1416 aa20.4■□□□□ 0.86
KRT40-202ENST00000398486 ADCY10Q96PN6 1610 aa20.4■□□□□ 0.86
KRT40-202ENST00000398486 CCDC18Q5T9S5 1454 aa20.38■□□□□ 0.85
KRT40-202ENST00000398486 UHRF1BP1LA0JNW5 1464 aa20.37■□□□□ 0.85
KRT40-202ENST00000398486 ATP1B4Q9UN42 357 aaPredicted RBP20.36■□□□□ 0.85
KRT40-202ENST00000398486 MAGI3Q5TCQ9 1506 aa20.35■□□□□ 0.85
KRT40-202ENST00000398486 ARID3CA6NKF2 412 aa20.32■□□□□ 0.84
KRT40-202ENST00000398486 PPARGC1BQ86YN6 1023 aaKnown RBP20.32■□□□□ 0.84
KRT40-202ENST00000398486 ATP10BO94823 1461 aa20.32■□□□□ 0.84
KRT40-202ENST00000398486 LRRC9Q6ZRR7 1453 aa20.32■□□□□ 0.84
KRT40-202ENST00000398486 KANK4Q5T7N3 995 aaPredicted RBP20.31■□□□□ 0.84
KRT40-202ENST00000398486 ZCCHC11Q5TAX3 1644 aaKnown RBP20.31■□□□□ 0.84
KRT40-202ENST00000398486 KDM5BQ9UGL1 1544 aa20.29■□□□□ 0.84
KRT40-202ENST00000398486 APLP2Q06481 763 aa20.28■□□□□ 0.84
KRT40-202ENST00000398486 EHBP1L1Q8N3D4 1523 aa20.26■□□□□ 0.83
KRT40-202ENST00000398486 MTUS2Q5JR59 1369 aa20.2■□□□□ 0.82
KRT40-202ENST00000398486 CYB5RLQ6IPT4 315 aa20.19■□□□□ 0.82
KRT40-202ENST00000398486 SUPT6HQ7KZ85 1726 aaKnown RBP20.19■□□□□ 0.82
KRT40-202ENST00000398486 KIF14Q15058 1648 aa20.19■□□□□ 0.82
KRT40-202ENST00000398486 TROQ12816 1431 aaPredicted RBP20.18■□□□□ 0.82
KRT40-202ENST00000398486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.15■□□□□ 0.82
KRT40-202ENST00000398486 HNRNPUL2Q1KMD3 747 aaKnown RBP20.15■□□□□ 0.82
KRT40-202ENST00000398486 NCOA2Q15596 1464 aa20.14■□□□□ 0.82
KRT40-202ENST00000398486 PHLDB1Q86UU1 1377 aa20.12■□□□□ 0.81
KRT40-202ENST00000398486 DNAJC5Q9H3Z4 198 aa20.11■□□□□ 0.81
KRT40-202ENST00000398486 CDK11AQ9UQ88 783 aaPredicted RBP20.11■□□□□ 0.81
KRT40-202ENST00000398486 WDR7Q9Y4E6 1490 aa20.1■□□□□ 0.81
KRT40-202ENST00000398486 ASXL2Q76L83 1435 aa20.09■□□□□ 0.81
KRT40-202ENST00000398486 MAPKBP1O60336 1514 aa20.08■□□□□ 0.81
KRT40-202ENST00000398486 TTC37Q6PGP7 1564 aa20.08■□□□□ 0.8
KRT40-202ENST00000398486 PLEKHD1A6NEE1 506 aa20.08■□□□□ 0.8
KRT40-202ENST00000398486 ABCC10Q5T3U5 1492 aa20.07■□□□□ 0.8
KRT40-202ENST00000398486 CDC42BPAQ5VT25 1732 aa20.05■□□□□ 0.8
KRT40-202ENST00000398486 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.05■□□□□ 0.8
KRT40-202ENST00000398486 MYOM3Q5VTT5 1437 aa20.03■□□□□ 0.8
KRT40-202ENST00000398486 RRBP1Q9P2E9 1410 aaKnown RBP20.02■□□□□ 0.8
KRT40-202ENST00000398486 ITSN2Q9NZM3 1697 aa20.01■□□□□ 0.79
KRT40-202ENST00000398486 NPM1P06748 294 aaKnown RBP eCLIP20■□□□□ 0.79
KRT40-202ENST00000398486 PREX2Q70Z35 1606 aa20■□□□□ 0.79
KRT40-202ENST00000398486 ABCA9Q8IUA7 1624 aa20■□□□□ 0.79
KRT40-202ENST00000398486 FGD6Q6ZV73 1430 aa19.99■□□□□ 0.79
KRT40-202ENST00000398486 GPATCH8Q9UKJ3 1502 aaKnown RBP19.99■□□□□ 0.79
KRT40-202ENST00000398486 MYO5CQ9NQX4 1742 aa19.98■□□□□ 0.79
KRT40-202ENST00000398486 CDC42BPBQ9Y5S2 1711 aa19.98■□□□□ 0.79
KRT40-202ENST00000398486 PTPN23Q9H3S7 1636 aa19.96■□□□□ 0.79
KRT40-202ENST00000398486 CCNB3Q8WWL7 1395 aa19.96■□□□□ 0.79
KRT40-202ENST00000398486 TRIM26Q12899 539 aaPredicted RBP19.95■□□□□ 0.78
KRT40-202ENST00000398486 KCNH8Q96L42 1107 aa19.95■□□□□ 0.78
KRT40-202ENST00000398486 DIP2BQ9P265 1576 aa19.94■□□□□ 0.78
KRT40-202ENST00000398486 MIA2Q96PC5 1412 aa19.92■□□□□ 0.78
KRT40-202ENST00000398486 TCOF1Q13428 1488 aaKnown RBP19.91■□□□□ 0.78
KRT40-202ENST00000398486 KIF13AQ9H1H9 1805 aa19.9■□□□□ 0.78
KRT40-202ENST00000398486 GLI2P10070 1586 aa19.89■□□□□ 0.78
KRT40-202ENST00000398486 MAP3K4Q9Y6R4 1608 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms