RNA–Protein interactions for RNA: ENST00000398453.7

SMAGP-202, Transcript of small cell adhesion glycoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAGP, Length 1,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAGP-202ENST00000398453 CEP170Q5SW79 1584 aa26.33■■□□□ 1.8
SMAGP-202ENST00000398453 NUP160Q12769 1436 aa26.28■■□□□ 1.8
SMAGP-202ENST00000398453 CEP162Q5TB80 1403 aa26.28■■□□□ 1.8
SMAGP-202ENST00000398453 IQGAP2Q13576 1575 aa26.25■■□□□ 1.79
SMAGP-202ENST00000398453 RANGAP1P46060 587 aaPredicted RBP26.23■■□□□ 1.79
SMAGP-202ENST00000398453 KIAA0586Q9BVV6 1533 aa26.22■■□□□ 1.79
SMAGP-202ENST00000398453 CLIP1P30622 1438 aa26.2■■□□□ 1.78
SMAGP-202ENST00000398453 CLASP1Q7Z460 1538 aa26.11■■□□□ 1.77
SMAGP-202ENST00000398453 EFCAB5A4FU69 1503 aa26.09■■□□□ 1.77
SMAGP-202ENST00000398453 UGGT2Q9NYU1 1516 aa26.09■■□□□ 1.77
SMAGP-202ENST00000398453 ARHGAP35Q9NRY4 1499 aa26.09■■□□□ 1.77
SMAGP-202ENST00000398453 SAMD9Q5K651 1589 aa26.08■■□□□ 1.77
SMAGP-202ENST00000398453 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
SMAGP-202ENST00000398453 SHROOM2Q13796 1616 aa26.02■■□□□ 1.76
SMAGP-202ENST00000398453 KIAA0556O60303 1618 aa26■■□□□ 1.75
SMAGP-202ENST00000398453 OSCARQ8IYS5 282 aa25.99■■□□□ 1.75
SMAGP-202ENST00000398453 JPH4Q96JJ6 628 aa25.99■■□□□ 1.75
SMAGP-202ENST00000398453 FHOD3Q2V2M9 1422 aa25.98■■□□□ 1.75
SMAGP-202ENST00000398453 P3H3Q8IVL6 736 aa25.98■■□□□ 1.75
SMAGP-202ENST00000398453 DISP1Q96F81 1524 aa25.98■■□□□ 1.75
SMAGP-202ENST00000398453 CARMIL2Q6F5E8 1435 aa25.92■■□□□ 1.74
SMAGP-202ENST00000398453 PRG4Q92954 1404 aaPredicted RBP25.92■■□□□ 1.74
SMAGP-202ENST00000398453 VPS8Q8N3P4 1428 aa25.89■■□□□ 1.74
SMAGP-202ENST00000398453 ERCC6L2Q5T890 1561 aa25.86■■□□□ 1.73
SMAGP-202ENST00000398453 FMN1Q68DA7 1419 aa25.81■■□□□ 1.72
SMAGP-202ENST00000398453 PCF11O94913 1555 aaKnown RBP25.8■■□□□ 1.72
SMAGP-202ENST00000398453 TTBK1Q5TCY1 1321 aaPredicted RBP25.77■■□□□ 1.72
SMAGP-202ENST00000398453 FYCO1Q9BQS8 1478 aa25.72■■□□□ 1.71
SMAGP-202ENST00000398453 CASKIN1Q8WXD9 1431 aa25.71■■□□□ 1.71
SMAGP-202ENST00000398453 PTPRGP23470 1445 aa25.7■■□□□ 1.7
SMAGP-202ENST00000398453 RAPGEF6Q8TEU7 1601 aa25.69■■□□□ 1.7
SMAGP-202ENST00000398453 HECW1Q76N89 1606 aa25.67■■□□□ 1.7
SMAGP-202ENST00000398453 ARHGEF11O15085 1522 aa25.65■■□□□ 1.7
SMAGP-202ENST00000398453 PLB1Q6P1J6 1458 aa25.65■■□□□ 1.7
SMAGP-202ENST00000398453 ATP1B4Q9UN42 357 aaPredicted RBP25.64■■□□□ 1.7
SMAGP-202ENST00000398453 ABCA8O94911 1581 aa25.64■■□□□ 1.69
SMAGP-202ENST00000398453 LRRIQ1Q96JM4 1722 aa25.63■■□□□ 1.69
SMAGP-202ENST00000398453 CFAP43Q8NDM7 1665 aa25.6■■□□□ 1.69
SMAGP-202ENST00000398453 RIMBP3CA6NJZ7 1639 aa25.59■■□□□ 1.69
SMAGP-202ENST00000398453 RIMBP3BA6NNM3 1639 aa25.59■■□□□ 1.69
SMAGP-202ENST00000398453 RIMBP3Q9UFD9 1639 aa25.59■■□□□ 1.69
SMAGP-202ENST00000398453 APLP2Q06481 763 aa25.58■■□□□ 1.69
SMAGP-202ENST00000398453 TIAM1Q13009 1591 aa25.56■■□□□ 1.68
SMAGP-202ENST00000398453 NUP153P49790 1475 aaKnown RBP25.56■■□□□ 1.68
SMAGP-202ENST00000398453 UACAQ9BZF9 1416 aa25.55■■□□□ 1.68
SMAGP-202ENST00000398453 CCDC18Q5T9S5 1454 aa25.53■■□□□ 1.68
SMAGP-202ENST00000398453 EPRSP07814 1512 aaKnown RBP25.53■■□□□ 1.68
SMAGP-202ENST00000398453 ABCC2Q92887 1545 aa25.53■■□□□ 1.68
SMAGP-202ENST00000398453 MAP3K1Q13233 1512 aa25.52■■□□□ 1.68
SMAGP-202ENST00000398453 CDK13Q14004 1512 aaKnown RBP25.52■■□□□ 1.68
SMAGP-202ENST00000398453 ARID3CA6NKF2 412 aa25.5■■□□□ 1.67
SMAGP-202ENST00000398453 PPARGC1BQ86YN6 1023 aaKnown RBP25.48■■□□□ 1.67
SMAGP-202ENST00000398453 ADCY10Q96PN6 1610 aa25.47■■□□□ 1.67
SMAGP-202ENST00000398453 UHRF1BP1LA0JNW5 1464 aa25.47■■□□□ 1.67
SMAGP-202ENST00000398453 ATP10BO94823 1461 aa25.4■■□□□ 1.66
SMAGP-202ENST00000398453 LRRC9Q6ZRR7 1453 aa25.4■■□□□ 1.66
SMAGP-202ENST00000398453 KANK4Q5T7N3 995 aaPredicted RBP25.4■■□□□ 1.66
SMAGP-202ENST00000398453 ZCCHC11Q5TAX3 1644 aaKnown RBP25.39■■□□□ 1.66
SMAGP-202ENST00000398453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.39■■□□□ 1.66
SMAGP-202ENST00000398453 HNRNPUL2Q1KMD3 747 aaKnown RBP25.39■■□□□ 1.66
SMAGP-202ENST00000398453 MAGI3Q5TCQ9 1506 aa25.37■■□□□ 1.65
SMAGP-202ENST00000398453 EHBP1L1Q8N3D4 1523 aa25.37■■□□□ 1.65
SMAGP-202ENST00000398453 MTUS2Q5JR59 1369 aa25.35■■□□□ 1.65
SMAGP-202ENST00000398453 KDM5BQ9UGL1 1544 aa25.35■■□□□ 1.65
SMAGP-202ENST00000398453 CYB5RLQ6IPT4 315 aa25.33■■□□□ 1.65
SMAGP-202ENST00000398453 CDK11AQ9UQ88 783 aaPredicted RBP25.29■■□□□ 1.64
SMAGP-202ENST00000398453 SUPT6HQ7KZ85 1726 aaKnown RBP25.29■■□□□ 1.64
SMAGP-202ENST00000398453 TROQ12816 1431 aaPredicted RBP25.27■■□□□ 1.64
SMAGP-202ENST00000398453 PLEKHD1A6NEE1 506 aa25.22■■□□□ 1.63
SMAGP-202ENST00000398453 NPM1P06748 294 aaKnown RBP eCLIP25.21■■□□□ 1.63
SMAGP-202ENST00000398453 KIF14Q15058 1648 aa25.21■■□□□ 1.63
SMAGP-202ENST00000398453 NCOA2Q15596 1464 aa25.2■■□□□ 1.62
SMAGP-202ENST00000398453 DNAJC5Q9H3Z4 198 aa25.17■■□□□ 1.62
SMAGP-202ENST00000398453 WDR7Q9Y4E6 1490 aa25.15■■□□□ 1.62
SMAGP-202ENST00000398453 ASXL2Q76L83 1435 aa25.14■■□□□ 1.62
SMAGP-202ENST00000398453 PHLDB1Q86UU1 1377 aa25.14■■□□□ 1.61
SMAGP-202ENST00000398453 MAPKBP1O60336 1514 aa25.1■■□□□ 1.61
SMAGP-202ENST00000398453 ABCC10Q5T3U5 1492 aa25.08■■□□□ 1.6
SMAGP-202ENST00000398453 TTC37Q6PGP7 1564 aa25.07■■□□□ 1.6
SMAGP-202ENST00000398453 MYOM3Q5VTT5 1437 aa25.06■■□□□ 1.6
SMAGP-202ENST00000398453 KCNH8Q96L42 1107 aa25.06■■□□□ 1.6
SMAGP-202ENST00000398453 ITSN2Q9NZM3 1697 aa25.06■■□□□ 1.6
SMAGP-202ENST00000398453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.06■■□□□ 1.6
SMAGP-202ENST00000398453 CCNB3Q8WWL7 1395 aa25.05■■□□□ 1.6
SMAGP-202ENST00000398453 TRIM26Q12899 539 aaPredicted RBP25.04■■□□□ 1.6
SMAGP-202ENST00000398453 CDC42BPAQ5VT25 1732 aa25.03■■□□□ 1.6
SMAGP-202ENST00000398453 RRBP1Q9P2E9 1410 aaKnown RBP25.02■■□□□ 1.6
SMAGP-202ENST00000398453 FGD6Q6ZV73 1430 aa25.01■■□□□ 1.59
SMAGP-202ENST00000398453 MYO5CQ9NQX4 1742 aa25■■□□□ 1.59
SMAGP-202ENST00000398453 GPATCH8Q9UKJ3 1502 aaKnown RBP24.99■■□□□ 1.59
SMAGP-202ENST00000398453 PREX2Q70Z35 1606 aa24.98■■□□□ 1.59
SMAGP-202ENST00000398453 ABCA9Q8IUA7 1624 aa24.98■■□□□ 1.59
SMAGP-202ENST00000398453 PTPN23Q9H3S7 1636 aa24.97■■□□□ 1.59
SMAGP-202ENST00000398453 CDC42BPBQ9Y5S2 1711 aa24.95■■□□□ 1.58
SMAGP-202ENST00000398453 MIA2Q96PC5 1412 aa24.94■■□□□ 1.58
SMAGP-202ENST00000398453 DIP2BQ9P265 1576 aa24.92■■□□□ 1.58
SMAGP-202ENST00000398453 PCGF6Q9BYE7 350 aa24.9■■□□□ 1.58
SMAGP-202ENST00000398453 ARHGAP5Q13017 1502 aa24.9■■□□□ 1.58
SMAGP-202ENST00000398453 TCOF1Q13428 1488 aaKnown RBP24.89■■□□□ 1.58
SMAGP-202ENST00000398453 FAM50AQ14320 339 aaKnown RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms