RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 CHMP4BQ9H444 224 aaKnown RBP17.83■□□□□ 0.44
VGLL3-202ENST00000398399 PPP4R2Q9NY27 417 aa17.83■□□□□ 0.44
VGLL3-202ENST00000398399 EIF4G2P78344 907 aaKnown RBP eCLIP17.8■□□□□ 0.44
VGLL3-202ENST00000398399 EEA1Q15075 1411 aa17.8■□□□□ 0.44
VGLL3-202ENST00000398399 FTSJ3Q8IY81 847 aaKnown RBP17.79■□□□□ 0.44
VGLL3-202ENST00000398399 CLIP1P30622 1438 aa17.78■□□□□ 0.44
VGLL3-202ENST00000398399 IRX6P78412 446 aaPredicted RBP17.78■□□□□ 0.44
VGLL3-202ENST00000398399 DEKP35659 375 aaKnown RBP17.77■□□□□ 0.44
VGLL3-202ENST00000398399 RTN4Q9NQC3 1192 aaKnown RBP17.76■□□□□ 0.43
VGLL3-202ENST00000398399 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
VGLL3-202ENST00000398399 SALL2Q9Y467 1007 aaPredicted RBP17.75■□□□□ 0.43
VGLL3-202ENST00000398399 GOLGA3Q08378 1498 aa17.74■□□□□ 0.43
VGLL3-202ENST00000398399 ZCCHC6Q5VYS8 1495 aaKnown RBP17.74■□□□□ 0.43
VGLL3-202ENST00000398399 LAS1LQ9Y4W2 734 aaKnown RBP17.72■□□□□ 0.43
VGLL3-202ENST00000398399 MS4A1P11836 297 aa17.72■□□□□ 0.43
VGLL3-202ENST00000398399 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
VGLL3-202ENST00000398399 HSP90AB1P08238 724 aaKnown RBP17.71■□□□□ 0.43
VGLL3-202ENST00000398399 HSCBQ8IWL3 235 aa17.71■□□□□ 0.43
VGLL3-202ENST00000398399 ZNF777Q9ULD5 760 aaPredicted RBP17.71■□□□□ 0.43
VGLL3-202ENST00000398399 CDCA8Q53HL2 280 aa17.7■□□□□ 0.42
VGLL3-202ENST00000398399 SUPT16HQ9Y5B9 1047 aaKnown RBP17.7■□□□□ 0.42
VGLL3-202ENST00000398399 ESF1Q9H501 851 aaKnown RBP17.69■□□□□ 0.42
VGLL3-202ENST00000398399 MTUS2Q5JR59 1369 aa17.69■□□□□ 0.42
VGLL3-202ENST00000398399 STAG3Q9UJ98 1225 aa17.65■□□□□ 0.42
VGLL3-202ENST00000398399 CFAP53Q96M91 514 aa17.65■□□□□ 0.42
VGLL3-202ENST00000398399 ARID4BQ4LE39 1312 aaPredicted RBP17.65■□□□□ 0.42
VGLL3-202ENST00000398399 USP35Q9P2H5 1018 aa17.65■□□□□ 0.42
VGLL3-202ENST00000398399 KIAA2012Q0VF49 1180 aa17.64■□□□□ 0.42
VGLL3-202ENST00000398399 RSPH6AQ9H0K4 717 aa17.63■□□□□ 0.41
VGLL3-202ENST00000398399 CEP162Q5TB80 1403 aa17.62■□□□□ 0.41
VGLL3-202ENST00000398399 PNNQ9H307 717 aaKnown RBP17.62■□□□□ 0.41
VGLL3-202ENST00000398399 TNNT3P45378 269 aaPredicted RBP17.61■□□□□ 0.41
VGLL3-202ENST00000398399 GBP4Q96PP9 640 aa17.61■□□□□ 0.41
VGLL3-202ENST00000398399 ABCC9O60706 1549 aa17.6■□□□□ 0.41
VGLL3-202ENST00000398399 SYAP1Q96A49 352 aaPredicted RBP17.6■□□□□ 0.41
VGLL3-202ENST00000398399 KNSTRNQ9Y448 316 aa17.6■□□□□ 0.41
VGLL3-202ENST00000398399 FBLN2P98095 1184 aa17.59■□□□□ 0.41
VGLL3-202ENST00000398399 P3H3Q8IVL6 736 aa17.59■□□□□ 0.41
VGLL3-202ENST00000398399 KAT6BQ8WYB5 2073 aa17.58■□□□□ 0.41
VGLL3-202ENST00000398399 GOLGA6L4A6NEF3 574 aa17.58■□□□□ 0.4
VGLL3-202ENST00000398399 MCCP23508 829 aa17.57■□□□□ 0.4
VGLL3-202ENST00000398399 DRC7Q8IY82 874 aa17.57■□□□□ 0.4
VGLL3-202ENST00000398399 MYO15BQ96JP2 1530 aa17.54■□□□□ 0.4
VGLL3-202ENST00000398399 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
VGLL3-202ENST00000398399 PLCB2Q00722 1185 aa17.54■□□□□ 0.4
VGLL3-202ENST00000398399 GOLGA6L1Q8N7Z2 621 aa17.53■□□□□ 0.4
VGLL3-202ENST00000398399 RBM19Q9Y4C8 960 aaKnown RBP17.52■□□□□ 0.4
VGLL3-202ENST00000398399 PHF14O94880 888 aa17.51■□□□□ 0.39
VGLL3-202ENST00000398399 HSP90AA2PQ14568 343 aaPredicted RBP17.51■□□□□ 0.39
VGLL3-202ENST00000398399 RGS3P49796 1198 aa17.5■□□□□ 0.39
VGLL3-202ENST00000398399 RB1CC1Q8TDY2 1594 aa17.5■□□□□ 0.39
VGLL3-202ENST00000398399 CCER2I3L3R5 266 aa17.49■□□□□ 0.39
VGLL3-202ENST00000398399 TSPY4P0CV99 314 aa17.48■□□□□ 0.39
VGLL3-202ENST00000398399 TSPY10P0CW01 314 aa17.48■□□□□ 0.39
VGLL3-202ENST00000398399 CHGAP10645 457 aaKnown RBP17.48■□□□□ 0.39
VGLL3-202ENST00000398399 FGD1P98174 961 aa17.48■□□□□ 0.39
VGLL3-202ENST00000398399 ARID3CA6NKF2 412 aa17.47■□□□□ 0.39
VGLL3-202ENST00000398399 SETQ01105 290 aaPredicted RBP17.46■□□□□ 0.39
VGLL3-202ENST00000398399 MAPK8IP3Q9UPT6 1336 aa17.45■□□□□ 0.38
VGLL3-202ENST00000398399 KDM2AQ9Y2K7 1162 aa17.45■□□□□ 0.38
VGLL3-202ENST00000398399 HTATSF1O43719 755 aaKnown RBP17.43■□□□□ 0.38
VGLL3-202ENST00000398399 GOLGA6L3A6NEY3 463 aa17.43■□□□□ 0.38
VGLL3-202ENST00000398399 NOC3LQ8WTT2 800 aaKnown RBP17.43■□□□□ 0.38
VGLL3-202ENST00000398399 KCNJ4P48050 445 aa17.42■□□□□ 0.38
VGLL3-202ENST00000398399 TCERG1O14776 1098 aaKnown RBP17.41■□□□□ 0.38
VGLL3-202ENST00000398399 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
VGLL3-202ENST00000398399 AMER1Q5JTC6 1135 aaPredicted RBP17.4■□□□□ 0.38
VGLL3-202ENST00000398399 CSPP1Q1MSJ5 1256 aa17.39■□□□□ 0.38
VGLL3-202ENST00000398399 B4GALNT3Q6L9W6 998 aa17.39■□□□□ 0.37
VGLL3-202ENST00000398399 CHIC2Q9UKJ5 165 aa17.39■□□□□ 0.37
VGLL3-202ENST00000398399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.39■□□□□ 0.37
VGLL3-202ENST00000398399 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.39■□□□□ 0.37
VGLL3-202ENST00000398399 NUDCQ9Y266 331 aa17.39■□□□□ 0.37
VGLL3-202ENST00000398399 TPM4P67936 248 aa17.38■□□□□ 0.37
VGLL3-202ENST00000398399 TPRNQ4KMQ1 711 aa17.38■□□□□ 0.37
VGLL3-202ENST00000398399 IPO9Q96P70 1041 aaKnown RBP17.38■□□□□ 0.37
VGLL3-202ENST00000398399 HAP1P54257 671 aaPredicted RBP17.38■□□□□ 0.37
VGLL3-202ENST00000398399 TIMELESSQ9UNS1 1208 aa17.36■□□□□ 0.37
VGLL3-202ENST00000398399 DDX11L8A8MPP1 907 aa17.36■□□□□ 0.37
VGLL3-202ENST00000398399 CCDC34Q96HJ3 373 aa17.35■□□□□ 0.37
VGLL3-202ENST00000398399 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
VGLL3-202ENST00000398399 PABPN1Q86U42 306 aaKnown RBP eCLIP17.34■□□□□ 0.37
VGLL3-202ENST00000398399 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.37
VGLL3-202ENST00000398399 TNIKQ9UKE5 1360 aa17.33■□□□□ 0.36
VGLL3-202ENST00000398399 OS9Q13438 667 aaPredicted RBP17.33■□□□□ 0.36
VGLL3-202ENST00000398399 GNL2Q13823 731 aaKnown RBP17.32■□□□□ 0.36
VGLL3-202ENST00000398399 FRAT1Q92837 279 aaPredicted RBP17.31■□□□□ 0.36
VGLL3-202ENST00000398399 CARD11Q9BXL7 1154 aa17.3■□□□□ 0.36
VGLL3-202ENST00000398399 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
VGLL3-202ENST00000398399 KTN1Q86UP2 1357 aaKnown RBP17.3■□□□□ 0.36
VGLL3-202ENST00000398399 PHLDB1Q86UU1 1377 aa17.29■□□□□ 0.36
VGLL3-202ENST00000398399 CCNB3Q8WWL7 1395 aa17.29■□□□□ 0.36
VGLL3-202ENST00000398399 IPO8O15397 1037 aaKnown RBP17.28■□□□□ 0.36
VGLL3-202ENST00000398399 ARHGAP35Q9NRY4 1499 aa17.28■□□□□ 0.36
VGLL3-202ENST00000398399 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
VGLL3-202ENST00000398399 CALRP27797 417 aaKnown RBP17.27■□□□□ 0.36
VGLL3-202ENST00000398399 A0A0U1RQG5 324 aaPredicted RBP17.25■□□□□ 0.35
VGLL3-202ENST00000398399 GPS2Q13227 327 aa17.25■□□□□ 0.35
VGLL3-202ENST00000398399 NACADO15069 1562 aa17.24■□□□□ 0.35
VGLL3-202ENST00000398399 MTERF4Q7Z6M4 381 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms