RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 PRG4Q92954 1404 aaPredicted RBP43.33■■■■■ 4.53
U2AF1-203ENST00000398137 JPH4Q96JJ6 628 aa43.33■■■■■ 4.53
U2AF1-203ENST00000398137 KIAA0586Q9BVV6 1533 aa43.2■■■■■ 4.51
U2AF1-203ENST00000398137 CARMIL1Q5VZK9 1371 aa43.19■■■■■ 4.5
U2AF1-203ENST00000398137 CHIC1Q5VXU3 224 aa42.92■■■■■ 4.46
U2AF1-203ENST00000398137 ADCY10Q96PN6 1610 aa42.86■■■■■ 4.45
U2AF1-203ENST00000398137 RAPGEF2Q9Y4G8 1499 aa42.85■■■■■ 4.45
U2AF1-203ENST00000398137 IQGAP2Q13576 1575 aa42.85■■■■■ 4.45
U2AF1-203ENST00000398137 KIF13AQ9H1H9 1805 aa42.77■■■■■ 4.44
U2AF1-203ENST00000398137 DISP1Q96F81 1524 aa42.68■■■■■ 4.42
U2AF1-203ENST00000398137 MAPKBP1O60336 1514 aa42.67■■■■■ 4.42
U2AF1-203ENST00000398137 PTPRGP23470 1445 aa42.67■■■■■ 4.42
U2AF1-203ENST00000398137 CARMIL2Q6F5E8 1435 aa42.66■■■■■ 4.42
U2AF1-203ENST00000398137 TNIKQ9UKE5 1360 aa42.65■■■■■ 4.42
U2AF1-203ENST00000398137 UGGT2Q9NYU1 1516 aa42.63■■■■■ 4.42
U2AF1-203ENST00000398137 PRXQ9BXM0 1461 aa42.59■■■■■ 4.41
U2AF1-203ENST00000398137 ABCC10Q5T3U5 1492 aa42.57■■■■■ 4.41
U2AF1-203ENST00000398137 NPM1P06748 294 aaKnown RBP eCLIP42.57■■■■■ 4.41
U2AF1-203ENST00000398137 TTBK1Q5TCY1 1321 aaPredicted RBP42.54■■■■■ 4.4
U2AF1-203ENST00000398137 CTTNBP2Q8WZ74 1663 aa42.54■■■■■ 4.4
U2AF1-203ENST00000398137 DIP2BQ9P265 1576 aa42.52■■■■■ 4.4
U2AF1-203ENST00000398137 KIAA0556O60303 1618 aa42.49■■■■■ 4.39
U2AF1-203ENST00000398137 FAM69CQ0P6D2 419 aa42.44■■■■■ 4.38
U2AF1-203ENST00000398137 ABCC2Q92887 1545 aa42.44■■■■■ 4.38
U2AF1-203ENST00000398137 UHRF1BP1LA0JNW5 1464 aa42.43■■■■■ 4.38
U2AF1-203ENST00000398137 UACAQ9BZF9 1416 aa42.39■■■■■ 4.38
U2AF1-203ENST00000398137 EEA1Q15075 1411 aa42.31■■■■■ 4.36
U2AF1-203ENST00000398137 CSRNP3Q8WYN3 585 aa42.27■■■■■ 4.36
U2AF1-203ENST00000398137 ASXL2Q76L83 1435 aa42.25■■■■■ 4.35
U2AF1-203ENST00000398137 KDM5BQ9UGL1 1544 aa42.25■■■■■ 4.35
U2AF1-203ENST00000398137 FAM9AQ8IZU1 332 aaPredicted RBP42.24■■■■■ 4.35
U2AF1-203ENST00000398137 GOLGA3Q08378 1498 aa42.2■■■■■ 4.35
U2AF1-203ENST00000398137 TSPOAP1O95153 1857 aa42.18■■■■■ 4.34
U2AF1-203ENST00000398137 PLB1Q6P1J6 1458 aa42.17■■■■■ 4.34
U2AF1-203ENST00000398137 ZCCHC11Q5TAX3 1644 aaKnown RBP42.17■■■■■ 4.34
U2AF1-203ENST00000398137 GLI2P10070 1586 aa42.11■■■■■ 4.33
U2AF1-203ENST00000398137 ABCA8O94911 1581 aa42.1■■■■■ 4.33
U2AF1-203ENST00000398137 PPRC1Q5VV67 1664 aaKnown RBP42.05■■■■■ 4.32
U2AF1-203ENST00000398137 EPRSP07814 1512 aaKnown RBP42.01■■■■■ 4.32
U2AF1-203ENST00000398137 SAMD9Q5K651 1589 aa41.98■■■■■ 4.31
U2AF1-203ENST00000398137 KDM6BO15054 1643 aa41.97■■■■■ 4.31
U2AF1-203ENST00000398137 MAP3K4Q9Y6R4 1608 aa41.93■■■■■ 4.3
U2AF1-203ENST00000398137 P3H3Q8IVL6 736 aa41.92■■■■■ 4.3
U2AF1-203ENST00000398137 WDR7Q9Y4E6 1490 aa41.9■■■■■ 4.3
U2AF1-203ENST00000398137 KIF21BO75037 1637 aa41.88■■■■■ 4.3
U2AF1-203ENST00000398137 ATP10BO94823 1461 aa41.73■■■■■ 4.27
U2AF1-203ENST00000398137 COL17A1Q9UMD9 1497 aaPredicted RBP41.72■■■■■ 4.27
U2AF1-203ENST00000398137 EHMT2Q96KQ7 1210 aa41.7■■■■■ 4.27
U2AF1-203ENST00000398137 AEBP2Q6ZN18 517 aaPredicted RBP41.69■■■■■ 4.26
U2AF1-203ENST00000398137 RAPGEF6Q8TEU7 1601 aa41.69■■■■■ 4.26
U2AF1-203ENST00000398137 RANGAP1P46060 587 aaPredicted RBP41.68■■■■■ 4.26
U2AF1-203ENST00000398137 ARID3CA6NKF2 412 aa41.67■■■■■ 4.26
U2AF1-203ENST00000398137 FHOD3Q2V2M9 1422 aa41.67■■■■■ 4.26
U2AF1-203ENST00000398137 TEX14Q8IWB6 1497 aa41.64■■■■■ 4.26
U2AF1-203ENST00000398137 KCNH8Q96L42 1107 aa41.63■■■■■ 4.25
U2AF1-203ENST00000398137 CFAP43Q8NDM7 1665 aa41.63■■■■■ 4.25
U2AF1-203ENST00000398137 CD109Q6YHK3 1445 aa41.57■■■■■ 4.25
U2AF1-203ENST00000398137 NUP153P49790 1475 aaKnown RBP41.57■■■■■ 4.25
U2AF1-203ENST00000398137 EFCAB5A4FU69 1503 aa41.56■■■■■ 4.24
U2AF1-203ENST00000398137 MAGI3Q5TCQ9 1506 aa41.56■■■■■ 4.24
U2AF1-203ENST00000398137 UBTFP17480 764 aaKnown RBP41.49■■■■■ 4.23
U2AF1-203ENST00000398137 KDM4FA0A1W2PPD8 638 aa41.43■■■■■ 4.22
U2AF1-203ENST00000398137 ABCA9Q8IUA7 1624 aa41.43■■■■■ 4.22
U2AF1-203ENST00000398137 ARHGAP35Q9NRY4 1499 aa41.33■■■■■ 4.21
U2AF1-203ENST00000398137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.31■■■■■ 4.2
U2AF1-203ENST00000398137 HNRNPUL2Q1KMD3 747 aaKnown RBP41.31■■■■■ 4.2
U2AF1-203ENST00000398137 ARAP3Q8WWN8 1544 aa41.23■■■■■ 4.19
U2AF1-203ENST00000398137 CDK13Q14004 1512 aaKnown RBP41.2■■■■■ 4.19
U2AF1-203ENST00000398137 LOC105371045A0A1W2PR82 267 aa41.19■■■■■ 4.18
U2AF1-203ENST00000398137 ADGRL1O94910 1474 aa41.16■■■■■ 4.18
U2AF1-203ENST00000398137 PLEKHD1A6NEE1 506 aa41.15■■■■■ 4.18
U2AF1-203ENST00000398137 FMN1Q68DA7 1419 aa41.14■■■■■ 4.18
U2AF1-203ENST00000398137 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.11■■■■■ 4.179e-12■■■■■ 76.3
U2AF1-203ENST00000398137 NEO1Q92859 1461 aa41.1■■■■■ 4.17
U2AF1-203ENST00000398137 PHLDB1Q86UU1 1377 aa41.09■■■■■ 4.17
U2AF1-203ENST00000398137 HECW1Q76N89 1606 aa41.07■■■■■ 4.17
U2AF1-203ENST00000398137 TTC37Q6PGP7 1564 aa41.07■■■■■ 4.16
U2AF1-203ENST00000398137 FRMPD1Q5SYB0 1578 aa41.02■■■■■ 4.16
U2AF1-203ENST00000398137 LRRIQ1Q96JM4 1722 aa41.01■■■■■ 4.16
U2AF1-203ENST00000398137 RAPGEF3O95398 923 aa40.98■■■■■ 4.15
U2AF1-203ENST00000398137 CLIP1P30622 1438 aa40.94■■■■■ 4.14
U2AF1-203ENST00000398137 ATP1B4Q9UN42 357 aaPredicted RBP40.94■■■■■ 4.14
U2AF1-203ENST00000398137 CEP162Q5TB80 1403 aa40.91■■■■■ 4.14
U2AF1-203ENST00000398137 FANCAO15360 1455 aa40.9■■■■■ 4.14
U2AF1-203ENST00000398137 AKNAQ7Z591 1439 aa40.88■■■■■ 4.13
U2AF1-203ENST00000398137 RICTORQ6R327 1708 aa40.87■■■■■ 4.13
U2AF1-203ENST00000398137 PCF11O94913 1555 aaKnown RBP40.86■■■■■ 4.13
U2AF1-203ENST00000398137 CFAP74Q9C0B2 1584 aa40.86■■■■■ 4.13
U2AF1-203ENST00000398137 KIF14Q15058 1648 aa40.85■■■■■ 4.13
U2AF1-203ENST00000398137 PLCH2O75038 1416 aa40.81■■■■■ 4.12
U2AF1-203ENST00000398137 DENND4BO75064 1496 aaPredicted RBP40.8■■■■■ 4.12
U2AF1-203ENST00000398137 CASKIN1Q8WXD9 1431 aa40.8■■■■■ 4.12
U2AF1-203ENST00000398137 TROQ12816 1431 aaPredicted RBP40.78■■■■■ 4.12
U2AF1-203ENST00000398137 MYO5CQ9NQX4 1742 aa40.74■■■■■ 4.11
U2AF1-203ENST00000398137 CDK11AQ9UQ88 783 aaPredicted RBP40.74■■■■■ 4.11
U2AF1-203ENST00000398137 ARHGEF40Q8TER5 1519 aa40.69■■■■■ 4.1
U2AF1-203ENST00000398137 ZMYM4Q5VZL5 1548 aa40.68■■■■■ 4.1
U2AF1-203ENST00000398137 CCDC18Q5T9S5 1454 aa40.66■■■■■ 4.1
U2AF1-203ENST00000398137 ADAMTSL3P82987 1691 aa40.65■■■■■ 4.1
U2AF1-203ENST00000398137 FYCO1Q9BQS8 1478 aa40.64■■■■■ 4.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms