RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 CCDC88BA6NC98 1476 aa16.83■□□□□ 0.29
SOCS6-201ENST00000397942 CCNB3Q8WWL7 1395 aa16.82■□□□□ 0.28
SOCS6-201ENST00000397942 KANK4Q5T7N3 995 aaPredicted RBP16.81■□□□□ 0.28
SOCS6-201ENST00000397942 CHMP7Q8WUX9 453 aaPredicted RBP16.8■□□□□ 0.28
SOCS6-201ENST00000397942 CHGAP10645 457 aaKnown RBP16.78■□□□□ 0.28
SOCS6-201ENST00000397942 VPS8Q8N3P4 1428 aa16.78■□□□□ 0.28
SOCS6-201ENST00000397942 BCL11AQ9H165 835 aa16.78■□□□□ 0.28
SOCS6-201ENST00000397942 SUPT16HQ9Y5B9 1047 aaKnown RBP16.76■□□□□ 0.27
SOCS6-201ENST00000397942 SENP3-EIF4A1A0A087X0R7 540 aa16.74■□□□□ 0.27
SOCS6-201ENST00000397942 NEFMP07197 916 aa16.73■□□□□ 0.27
SOCS6-201ENST00000397942 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
SOCS6-201ENST00000397942 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
SOCS6-201ENST00000397942 CARMIL1Q5VZK9 1371 aa16.72■□□□□ 0.27
SOCS6-201ENST00000397942 PLEKHD1A6NEE1 506 aa16.72■□□□□ 0.27
SOCS6-201ENST00000397942 CFDP1Q9UEE9 299 aaPredicted RBP16.72■□□□□ 0.27
SOCS6-201ENST00000397942 TIMELESSQ9UNS1 1208 aa16.71■□□□□ 0.27
SOCS6-201ENST00000397942 RGL3Q3MIN7 710 aa16.71■□□□□ 0.26
SOCS6-201ENST00000397942 CUX2O14529 1486 aa16.64■□□□□ 0.25
SOCS6-201ENST00000397942 FHAD1B1AJZ9 1412 aa16.64■□□□□ 0.25
SOCS6-201ENST00000397942 NBR1Q14596 966 aa16.63■□□□□ 0.25
SOCS6-201ENST00000397942 WDR43Q15061 677 aaKnown RBP eCLIP16.63■□□□□ 0.25
SOCS6-201ENST00000397942 KCNH8Q96L42 1107 aa16.62■□□□□ 0.25
SOCS6-201ENST00000397942 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
SOCS6-201ENST00000397942 CARD11Q9BXL7 1154 aa16.6■□□□□ 0.25
SOCS6-201ENST00000397942 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.59■□□□□ 0.25
SOCS6-201ENST00000397942 SLC24A1O60721 1099 aa16.58■□□□□ 0.24
SOCS6-201ENST00000397942 SETD5Q9C0A6 1442 aa16.56■□□□□ 0.24
SOCS6-201ENST00000397942 RAB3GAP2Q9H2M9 1393 aa16.55■□□□□ 0.24
SOCS6-201ENST00000397942 PPP1R15AO75807 674 aaPredicted RBP16.55■□□□□ 0.24
SOCS6-201ENST00000397942 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
SOCS6-201ENST00000397942 UPF2Q9HAU5 1272 aaKnown RBP16.54■□□□□ 0.24
SOCS6-201ENST00000397942 CCER2I3L3R5 266 aa16.54■□□□□ 0.24
SOCS6-201ENST00000397942 RUSC2Q8N2Y8 1516 aa16.53■□□□□ 0.24
SOCS6-201ENST00000397942 ANP32EQ9BTT0 268 aa16.53■□□□□ 0.24
SOCS6-201ENST00000397942 PPP4R2Q9NY27 417 aa16.52■□□□□ 0.24
SOCS6-201ENST00000397942 WIZO95785 1651 aa16.51■□□□□ 0.23
SOCS6-201ENST00000397942 B4GALNT3Q6L9W6 998 aa16.5■□□□□ 0.23
SOCS6-201ENST00000397942 ESF1Q9H501 851 aaKnown RBP16.48■□□□□ 0.23
SOCS6-201ENST00000397942 RAPGEF2Q9Y4G8 1499 aa16.48■□□□□ 0.23
SOCS6-201ENST00000397942 FOXD1Q16676 465 aa16.48■□□□□ 0.23
SOCS6-201ENST00000397942 HSPA5P11021 654 aaKnown RBP16.47■□□□□ 0.23
SOCS6-201ENST00000397942 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
SOCS6-201ENST00000397942 HSP90AA1P07900 732 aaKnown RBP16.46■□□□□ 0.23
SOCS6-201ENST00000397942 KNSTRNQ9Y448 316 aa16.46■□□□□ 0.22
SOCS6-201ENST00000397942 DCAF11Q8TEB1 546 aa16.44■□□□□ 0.22
SOCS6-201ENST00000397942 TOP2AP11388 1531 aaKnown RBP16.42■□□□□ 0.22
SOCS6-201ENST00000397942 DHX57Q6P158 1386 aaKnown RBP16.42■□□□□ 0.22
SOCS6-201ENST00000397942 SENP3Q9H4L4 574 aaPredicted RBP16.41■□□□□ 0.22
SOCS6-201ENST00000397942 CDCA8Q53HL2 280 aa16.41■□□□□ 0.22
SOCS6-201ENST00000397942 EIF5BO60841 1220 aaKnown RBP16.41■□□□□ 0.22
SOCS6-201ENST00000397942 RBM19Q9Y4C8 960 aaKnown RBP16.4■□□□□ 0.22
SOCS6-201ENST00000397942 MPHOSPH9Q99550 1183 aa16.4■□□□□ 0.22
SOCS6-201ENST00000397942 PKD2Q13563 968 aa16.39■□□□□ 0.21
SOCS6-201ENST00000397942 L3MBTL2Q969R5 705 aa16.39■□□□□ 0.21
SOCS6-201ENST00000397942 ARHGAP35Q9NRY4 1499 aa16.38■□□□□ 0.21
SOCS6-201ENST00000397942 NEUROD2Q15784 382 aa16.36■□□□□ 0.21
SOCS6-201ENST00000397942 SMARCA2P51531 1590 aa16.36■□□□□ 0.21
SOCS6-201ENST00000397942 ATAD2BQ9ULI0 1458 aa16.36■□□□□ 0.21
SOCS6-201ENST00000397942 FMN1Q68DA7 1419 aa16.34■□□□□ 0.21
SOCS6-201ENST00000397942 CADPSQ9ULU8 1353 aa16.34■□□□□ 0.21
SOCS6-201ENST00000397942 CC2D1BQ5T0F9 858 aaKnown RBP16.34■□□□□ 0.21
SOCS6-201ENST00000397942 TSHZ2Q9NRE2 1034 aa16.33■□□□□ 0.2
SOCS6-201ENST00000397942 ARXQ96QS3 562 aa16.32■□□□□ 0.2
SOCS6-201ENST00000397942 FHOD3Q2V2M9 1422 aa16.31■□□□□ 0.2
SOCS6-201ENST00000397942 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
SOCS6-201ENST00000397942 RGS3P49796 1198 aa16.3■□□□□ 0.2
SOCS6-201ENST00000397942 CFAP53Q96M91 514 aa16.28■□□□□ 0.2
SOCS6-201ENST00000397942 ANP32BQ92688 251 aaKnown RBP16.27■□□□□ 0.2
SOCS6-201ENST00000397942 TMF1P82094 1093 aa16.27■□□□□ 0.2
SOCS6-201ENST00000397942 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
SOCS6-201ENST00000397942 ERICH6BQ5W0A0 696 aa16.26■□□□□ 0.19
SOCS6-201ENST00000397942 DDRGK1Q96HY6 314 aa16.25■□□□□ 0.19
SOCS6-201ENST00000397942 EIF4G1Q04637 1599 aaKnown RBP16.25■□□□□ 0.19
SOCS6-201ENST00000397942 NUP155O75694 1391 aa16.25■□□□□ 0.19
SOCS6-201ENST00000397942 NOP58Q9Y2X3 529 aaKnown RBP16.24■□□□□ 0.19
SOCS6-201ENST00000397942 FRAT1Q92837 279 aaPredicted RBP16.23■□□□□ 0.19
SOCS6-201ENST00000397942 PPM1GO15355 546 aaPredicted RBP16.23■□□□□ 0.19
SOCS6-201ENST00000397942 LAS1LQ9Y4W2 734 aaKnown RBP16.23■□□□□ 0.19
SOCS6-201ENST00000397942 BECN1Q14457 450 aa16.21■□□□□ 0.19
SOCS6-201ENST00000397942 IGF1RP08069 1367 aa16.21■□□□□ 0.19
SOCS6-201ENST00000397942 SMARCA4P51532 1647 aa16.21■□□□□ 0.18
SOCS6-201ENST00000397942 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
SOCS6-201ENST00000397942 MYH16Q9H6N6 1097 aa16.18■□□□□ 0.18
SOCS6-201ENST00000397942 PRKRIP1Q9H875 184 aaPredicted RBP16.17■□□□□ 0.18
SOCS6-201ENST00000397942 FTSJ3Q8IY81 847 aaKnown RBP16.16■□□□□ 0.18
SOCS6-201ENST00000397942 RCAN3Q9UKA8 241 aa16.16■□□□□ 0.18
SOCS6-201ENST00000397942 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
SOCS6-201ENST00000397942 ERCC6Q03468 1493 aa16.14■□□□□ 0.17
SOCS6-201ENST00000397942 ANKRD30AQ9BXX3 1397 aa16.14■□□□□ 0.17
SOCS6-201ENST00000397942 RALBP1Q15311 655 aa16.13■□□□□ 0.17
SOCS6-201ENST00000397942 U2SURPO15042 1029 aaKnown RBP16.13■□□□□ 0.17
SOCS6-201ENST00000397942 NLRP13Q86W25 1043 aa16.13■□□□□ 0.17
SOCS6-201ENST00000397942 ST20-MTHFSA0A0A6YYL1 179 aa16.13■□□□□ 0.17
SOCS6-201ENST00000397942 JPH4Q96JJ6 628 aa16.13■□□□□ 0.17
SOCS6-201ENST00000397942 MAPK8IP3Q9UPT6 1336 aa16.12■□□□□ 0.17
SOCS6-201ENST00000397942 POGKQ9P215 609 aa16.12■□□□□ 0.17
SOCS6-201ENST00000397942 KTN1Q86UP2 1357 aaKnown RBP16.11■□□□□ 0.17
SOCS6-201ENST00000397942 HNRNPMP52272 730 aaKnown RBP eCLIP16.11■□□□□ 0.171e-7■■■■□ 26.2
SOCS6-201ENST00000397942 EFCAB2Q5VUJ9 269 aa16.11■□□□□ 0.17
SOCS6-201ENST00000397942 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms