RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 CUL7Q14999 1698 aa24.93■■□□□ 1.58
SNRNP25-203ENST00000397876 IGF1RP08069 1367 aa24.9■■□□□ 1.58
SNRNP25-203ENST00000397876 KIAA0586Q9BVV6 1533 aa24.84■■□□□ 1.57
SNRNP25-203ENST00000397876 CARMIL1Q5VZK9 1371 aa24.76■■□□□ 1.55
SNRNP25-203ENST00000397876 KIF13AQ9H1H9 1805 aa24.7■■□□□ 1.55
SNRNP25-203ENST00000397876 NPM1P06748 294 aaKnown RBP eCLIP24.69■■□□□ 1.54
SNRNP25-203ENST00000397876 ADCY10Q96PN6 1610 aa24.68■■□□□ 1.54
SNRNP25-203ENST00000397876 MAPKBP1O60336 1514 aa24.66■■□□□ 1.54
SNRNP25-203ENST00000397876 IQGAP2Q13576 1575 aa24.63■■□□□ 1.53
SNRNP25-203ENST00000397876 CARMIL2Q6F5E8 1435 aa24.61■■□□□ 1.53
SNRNP25-203ENST00000397876 ABCC10Q5T3U5 1492 aa24.61■■□□□ 1.53
SNRNP25-203ENST00000397876 PTPRGP23470 1445 aa24.59■■□□□ 1.53
SNRNP25-203ENST00000397876 DIP2BQ9P265 1576 aa24.58■■□□□ 1.52
SNRNP25-203ENST00000397876 FAM69CQ0P6D2 419 aa24.57■■□□□ 1.52
SNRNP25-203ENST00000397876 RAPGEF2Q9Y4G8 1499 aa24.56■■□□□ 1.52
SNRNP25-203ENST00000397876 TNIKQ9UKE5 1360 aa24.55■■□□□ 1.52
SNRNP25-203ENST00000397876 TTBK1Q5TCY1 1321 aaPredicted RBP24.52■■□□□ 1.52
SNRNP25-203ENST00000397876 AEBP2Q6ZN18 517 aaPredicted RBP24.49■■□□□ 1.51
SNRNP25-203ENST00000397876 ABCC2Q92887 1545 aa24.47■■□□□ 1.51
SNRNP25-203ENST00000397876 DISP1Q96F81 1524 aa24.47■■□□□ 1.51
SNRNP25-203ENST00000397876 UGGT2Q9NYU1 1516 aa24.46■■□□□ 1.51
SNRNP25-203ENST00000397876 UHRF1BP1LA0JNW5 1464 aa24.43■■□□□ 1.5
SNRNP25-203ENST00000397876 KIAA0556O60303 1618 aa24.41■■□□□ 1.5
SNRNP25-203ENST00000397876 UACAQ9BZF9 1416 aa24.41■■□□□ 1.5
SNRNP25-203ENST00000397876 CTTNBP2Q8WZ74 1663 aa24.39■■□□□ 1.49
SNRNP25-203ENST00000397876 TSPOAP1O95153 1857 aa24.37■■□□□ 1.49
SNRNP25-203ENST00000397876 PLB1Q6P1J6 1458 aa24.37■■□□□ 1.49
SNRNP25-203ENST00000397876 ASXL2Q76L83 1435 aa24.36■■□□□ 1.49
SNRNP25-203ENST00000397876 KDM6BO15054 1643 aa24.36■■□□□ 1.49
SNRNP25-203ENST00000397876 KDM5BQ9UGL1 1544 aa24.31■■□□□ 1.48
SNRNP25-203ENST00000397876 GLI2P10070 1586 aa24.31■■□□□ 1.48
SNRNP25-203ENST00000397876 PRXQ9BXM0 1461 aa24.31■■□□□ 1.48
SNRNP25-203ENST00000397876 GOLGA3Q08378 1498 aa24.29■■□□□ 1.48
SNRNP25-203ENST00000397876 ZCCHC11Q5TAX3 1644 aaKnown RBP24.27■■□□□ 1.48
SNRNP25-203ENST00000397876 EPRSP07814 1512 aaKnown RBP24.22■■□□□ 1.47
SNRNP25-203ENST00000397876 PPRC1Q5VV67 1664 aaKnown RBP24.21■■□□□ 1.47
SNRNP25-203ENST00000397876 MAP3K4Q9Y6R4 1608 aa24.17■■□□□ 1.46
SNRNP25-203ENST00000397876 WDR7Q9Y4E6 1490 aa24.16■■□□□ 1.46
SNRNP25-203ENST00000397876 ABCA8O94911 1581 aa24.16■■□□□ 1.46
SNRNP25-203ENST00000397876 TEX14Q8IWB6 1497 aa24.13■■□□□ 1.45
SNRNP25-203ENST00000397876 CSRNP3Q8WYN3 585 aa24.11■■□□□ 1.45
SNRNP25-203ENST00000397876 EEA1Q15075 1411 aa24.09■■□□□ 1.45
SNRNP25-203ENST00000397876 FAM9AQ8IZU1 332 aaPredicted RBP24.07■■□□□ 1.44
SNRNP25-203ENST00000397876 SAMD9Q5K651 1589 aa24.03■■□□□ 1.44
SNRNP25-203ENST00000397876 CFAP43Q8NDM7 1665 aa24.02■■□□□ 1.44
SNRNP25-203ENST00000397876 COL17A1Q9UMD9 1497 aaPredicted RBP24.01■■□□□ 1.43
SNRNP25-203ENST00000397876 P3H3Q8IVL6 736 aa24.01■■□□□ 1.43
SNRNP25-203ENST00000397876 KDM4FA0A1W2PPD8 638 aa24■■□□□ 1.43
SNRNP25-203ENST00000397876 KCNH8Q96L42 1107 aa23.98■■□□□ 1.43
SNRNP25-203ENST00000397876 CD109Q6YHK3 1445 aa23.98■■□□□ 1.43
SNRNP25-203ENST00000397876 MAGI3Q5TCQ9 1506 aa23.98■■□□□ 1.43
SNRNP25-203ENST00000397876 ATP10BO94823 1461 aa23.94■■□□□ 1.42
SNRNP25-203ENST00000397876 RAPGEF6Q8TEU7 1601 aa23.93■■□□□ 1.42
SNRNP25-203ENST00000397876 ARID3CA6NKF2 412 aa23.93■■□□□ 1.42
SNRNP25-203ENST00000397876 ADGRL1O94910 1474 aa23.9■■□□□ 1.42
SNRNP25-203ENST00000397876 KIF21BO75037 1637 aa23.88■■□□□ 1.41
SNRNP25-203ENST00000397876 RANGAP1P46060 587 aaPredicted RBP23.86■■□□□ 1.41
SNRNP25-203ENST00000397876 FHOD3Q2V2M9 1422 aa23.84■■□□□ 1.41
SNRNP25-203ENST00000397876 ABCA9Q8IUA7 1624 aa23.84■■□□□ 1.41
SNRNP25-203ENST00000397876 EFCAB5A4FU69 1503 aa23.83■■□□□ 1.41
SNRNP25-203ENST00000397876 NUP153P49790 1475 aaKnown RBP23.81■■□□□ 1.4
SNRNP25-203ENST00000397876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.81■■□□□ 1.4
SNRNP25-203ENST00000397876 HNRNPUL2Q1KMD3 747 aaKnown RBP23.81■■□□□ 1.4
SNRNP25-203ENST00000397876 ARAP3Q8WWN8 1544 aa23.78■■□□□ 1.4
SNRNP25-203ENST00000397876 PHLDB1Q86UU1 1377 aa23.75■■□□□ 1.39
SNRNP25-203ENST00000397876 NEO1Q92859 1461 aa23.71■■□□□ 1.39
SNRNP25-203ENST00000397876 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
SNRNP25-203ENST00000397876 PLEKHD1A6NEE1 506 aa23.67■■□□□ 1.38
SNRNP25-203ENST00000397876 UBTFP17480 764 aaKnown RBP23.66■■□□□ 1.38
SNRNP25-203ENST00000397876 EHMT2Q96KQ7 1210 aa23.64■■□□□ 1.37
SNRNP25-203ENST00000397876 RAPGEF3O95398 923 aa23.6■■□□□ 1.37
SNRNP25-203ENST00000397876 FRMPD1Q5SYB0 1578 aa23.6■■□□□ 1.37
SNRNP25-203ENST00000397876 CFAP74Q9C0B2 1584 aa23.6■■□□□ 1.37
SNRNP25-203ENST00000397876 FMN1Q68DA7 1419 aa23.59■■□□□ 1.37
SNRNP25-203ENST00000397876 CDK13Q14004 1512 aaKnown RBP23.59■■□□□ 1.37
SNRNP25-203ENST00000397876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.59■■□□□ 1.375e-7■■■□□ 18.3
SNRNP25-203ENST00000397876 HECW1Q76N89 1606 aa23.58■■□□□ 1.36
SNRNP25-203ENST00000397876 TTC37Q6PGP7 1564 aa23.57■■□□□ 1.36
SNRNP25-203ENST00000397876 ARHGAP35Q9NRY4 1499 aa23.57■■□□□ 1.36
SNRNP25-203ENST00000397876 FANCAO15360 1455 aa23.56■■□□□ 1.36
SNRNP25-203ENST00000397876 HECW2Q9P2P5 1572 aa23.55■■□□□ 1.36
SNRNP25-203ENST00000397876 DENND4BO75064 1496 aaPredicted RBP23.54■■□□□ 1.36
SNRNP25-203ENST00000397876 AKNAQ7Z591 1439 aa23.53■■□□□ 1.36
SNRNP25-203ENST00000397876 RICTORQ6R327 1708 aa23.51■■□□□ 1.35
SNRNP25-203ENST00000397876 ARHGEF40Q8TER5 1519 aa23.51■■□□□ 1.35
SNRNP25-203ENST00000397876 ATP1B4Q9UN42 357 aaPredicted RBP23.51■■□□□ 1.35
SNRNP25-203ENST00000397876 ADAMTSL3P82987 1691 aa23.48■■□□□ 1.35
SNRNP25-203ENST00000397876 CDK11AQ9UQ88 783 aaPredicted RBP23.46■■□□□ 1.35
SNRNP25-203ENST00000397876 BCORL1Q5H9F3 1711 aa23.45■■□□□ 1.34
SNRNP25-203ENST00000397876 ZMYM4Q5VZL5 1548 aa23.44■■□□□ 1.34
SNRNP25-203ENST00000397876 ARID4BQ4LE39 1312 aaPredicted RBP23.44■■□□□ 1.34
SNRNP25-203ENST00000397876 PLCH2O75038 1416 aa23.43■■□□□ 1.34
SNRNP25-203ENST00000397876 PTPRMP28827 1452 aa23.43■■□□□ 1.34
SNRNP25-203ENST00000397876 MYO5CQ9NQX4 1742 aa23.42■■□□□ 1.34
SNRNP25-203ENST00000397876 KIF14Q15058 1648 aa23.42■■□□□ 1.34
SNRNP25-203ENST00000397876 ZFYVE16Q7Z3T8 1539 aa23.4■■□□□ 1.34
SNRNP25-203ENST00000397876 MADDQ8WXG6 1647 aa23.4■■□□□ 1.34
SNRNP25-203ENST00000397876 CLIP1P30622 1438 aa23.39■■□□□ 1.33
SNRNP25-203ENST00000397876 TROQ12816 1431 aaPredicted RBP23.39■■□□□ 1.33
SNRNP25-203ENST00000397876 MAGI2Q86UL8 1455 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms