RNA–Protein interactions for RNA: ENST00000397174.6

SCMH1-209, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCMH1, Length 2,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-209ENST00000397174 HIRIP3Q9BW71 556 aaPredicted RBP14.49□□□□□ -0.09
SCMH1-209ENST00000397174 PPP4R2Q9NY27 417 aa14.49□□□□□ -0.09
SCMH1-209ENST00000397174 KIF21BO75037 1637 aa14.49□□□□□ -0.09
SCMH1-209ENST00000397174 MAPKBP1O60336 1514 aa14.48□□□□□ -0.09
SCMH1-209ENST00000397174 HNRNPUQ00839 825 aaKnown RBP eCLIP14.47□□□□□ -0.09
SCMH1-209ENST00000397174 CUX2O14529 1486 aa14.47□□□□□ -0.09
SCMH1-209ENST00000397174 UNC13AQ9UPW8 1703 aa14.47□□□□□ -0.09
SCMH1-209ENST00000397174 B4GALNT3Q6L9W6 998 aa14.46□□□□□ -0.1
SCMH1-209ENST00000397174 KANK4Q5T7N3 995 aaPredicted RBP14.44□□□□□ -0.1
SCMH1-209ENST00000397174 SMARCA4P51532 1647 aa14.44□□□□□ -0.1
SCMH1-209ENST00000397174 TOP2AP11388 1531 aaKnown RBP14.43□□□□□ -0.1
SCMH1-209ENST00000397174 RRBP1Q9P2E9 1410 aaKnown RBP14.43□□□□□ -0.1
SCMH1-209ENST00000397174 SMARCA2P51531 1590 aa14.42□□□□□ -0.1
SCMH1-209ENST00000397174 BAZ1BQ9UIG0 1483 aaKnown RBP14.4□□□□□ -0.1
SCMH1-209ENST00000397174 RAPGEF2Q9Y4G8 1499 aa14.4□□□□□ -0.1
SCMH1-209ENST00000397174 SIN3AQ96ST3 1273 aa14.4□□□□□ -0.1
SCMH1-209ENST00000397174 RAB3GAP2Q9H2M9 1393 aa14.39□□□□□ -0.11
SCMH1-209ENST00000397174 IPO9Q96P70 1041 aaKnown RBP14.38□□□□□ -0.11
SCMH1-209ENST00000397174 BICRAQ9NZM4 1560 aa14.37□□□□□ -0.11
SCMH1-209ENST00000397174 ANP32AP39687 249 aaKnown RBP14.36□□□□□ -0.11
SCMH1-209ENST00000397174 ZBTB47Q9UFB7 747 aaPredicted RBP14.36□□□□□ -0.11
SCMH1-209ENST00000397174 CCNB3Q8WWL7 1395 aa14.36□□□□□ -0.11
SCMH1-209ENST00000397174 WASHC2AQ641Q2 1341 aa14.34□□□□□ -0.11
SCMH1-209ENST00000397174 EIF5BO60841 1220 aaKnown RBP14.32□□□□□ -0.12
SCMH1-209ENST00000397174 ARAP1Q96P48 1450 aa14.31□□□□□ -0.12
SCMH1-209ENST00000397174 PLPPR3Q6T4P5 718 aa14.29□□□□□ -0.12
SCMH1-209ENST00000397174 C11orf95C9JLR9 678 aaPredicted RBP14.28□□□□□ -0.12
SCMH1-209ENST00000397174 SYNJ1O43426 1573 aa14.28□□□□□ -0.12
SCMH1-209ENST00000397174 BRPF3Q9ULD4 1205 aa14.26□□□□□ -0.13
SCMH1-209ENST00000397174 NEFMP07197 916 aa14.26□□□□□ -0.13
SCMH1-209ENST00000397174 WASHC2CQ9Y4E1 1318 aa14.26□□□□□ -0.13
SCMH1-209ENST00000397174 PHF23Q9BUL5 403 aaPredicted RBP14.25□□□□□ -0.13
SCMH1-209ENST00000397174 LAS1LQ9Y4W2 734 aaKnown RBP14.25□□□□□ -0.13
SCMH1-209ENST00000397174 SETD5Q9C0A6 1442 aa14.25□□□□□ -0.13
SCMH1-209ENST00000397174 PKNOX2Q96KN3 472 aa14.25□□□□□ -0.13
SCMH1-209ENST00000397174 DNAJC5BQ9UF47 199 aa14.24□□□□□ -0.13
SCMH1-209ENST00000397174 DAXXQ9UER7 740 aaPredicted RBP14.24□□□□□ -0.13
SCMH1-209ENST00000397174 TIMELESSQ9UNS1 1208 aa14.23□□□□□ -0.13
SCMH1-209ENST00000397174 CCDC184Q52MB2 194 aa14.21□□□□□ -0.14
SCMH1-209ENST00000397174 USP35Q9P2H5 1018 aa14.19□□□□□ -0.14
SCMH1-209ENST00000397174 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
SCMH1-209ENST00000397174 ATAD2BQ9ULI0 1458 aa14.17□□□□□ -0.14
SCMH1-209ENST00000397174 FAM9BQ8IZU0 186 aa14.16□□□□□ -0.14
SCMH1-209ENST00000397174 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.14
SCMH1-209ENST00000397174 NCAPD3P42695 1498 aa14.13□□□□□ -0.15
SCMH1-209ENST00000397174 AKNAQ7Z591 1439 aa14.13□□□□□ -0.15
SCMH1-209ENST00000397174 TONSLQ96HA7 1378 aa14.12□□□□□ -0.15
SCMH1-209ENST00000397174 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
SCMH1-209ENST00000397174 GSE1Q14687 1217 aa14.11□□□□□ -0.15
SCMH1-209ENST00000397174 PPM1GO15355 546 aaPredicted RBP14.1□□□□□ -0.15
SCMH1-209ENST00000397174 FAM50AQ14320 339 aaKnown RBP14.09□□□□□ -0.15
SCMH1-209ENST00000397174 RSPH6AQ9H0K4 717 aa14.09□□□□□ -0.15
SCMH1-209ENST00000397174 ERICH3Q5RHP9 1530 aa14.08□□□□□ -0.16
SCMH1-209ENST00000397174 MRS2Q9HD23 443 aa14.08□□□□□ -0.16
SCMH1-209ENST00000397174 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
SCMH1-209ENST00000397174 FHAD1B1AJZ9 1412 aa14.05□□□□□ -0.16
SCMH1-209ENST00000397174 FRAT1Q92837 279 aaPredicted RBP14.05□□□□□ -0.16
SCMH1-209ENST00000397174 SMG6Q86US8 1419 aaKnown RBP14.04□□□□□ -0.16
SCMH1-209ENST00000397174 PHLDB1Q86UU1 1377 aa14.04□□□□□ -0.16
SCMH1-209ENST00000397174 CNTLNQ9NXG0 1405 aa14.03□□□□□ -0.16
SCMH1-209ENST00000397174 ARHGAP35Q9NRY4 1499 aa14.03□□□□□ -0.16
SCMH1-209ENST00000397174 PRKRIP1Q9H875 184 aaPredicted RBP14.03□□□□□ -0.16
SCMH1-209ENST00000397174 RNF123Q5XPI4 1314 aa14.03□□□□□ -0.16
SCMH1-209ENST00000397174 HSPA5P11021 654 aaKnown RBP14.02□□□□□ -0.16
SCMH1-209ENST00000397174 PDE4AP27815 886 aa14.02□□□□□ -0.17
SCMH1-209ENST00000397174 NCOA2Q15596 1464 aa14.01□□□□□ -0.17
SCMH1-209ENST00000397174 FAM43AQ8N2R8 423 aa14.01□□□□□ -0.17
SCMH1-209ENST00000397174 TIAM1Q13009 1591 aa14□□□□□ -0.17
SCMH1-209ENST00000397174 NFKBIBQ15653 356 aa14□□□□□ -0.17
SCMH1-209ENST00000397174 NUDCQ9Y266 331 aa14□□□□□ -0.17
SCMH1-209ENST00000397174 TCERG1O14776 1098 aaKnown RBP13.98□□□□□ -0.17
SCMH1-209ENST00000397174 BACH2Q9BYV9 841 aa13.98□□□□□ -0.17
SCMH1-209ENST00000397174 ZMYND15Q9H091 742 aa13.98□□□□□ -0.17
SCMH1-209ENST00000397174 GLIPR1L2Q4G1C9 344 aa13.97□□□□□ -0.17
SCMH1-209ENST00000397174 KDM5BQ9UGL1 1544 aa13.97□□□□□ -0.17
SCMH1-209ENST00000397174 VSIG10Q8N0Z9 540 aa13.97□□□□□ -0.17
SCMH1-209ENST00000397174 LRRC9Q6ZRR7 1453 aa13.96□□□□□ -0.17
SCMH1-209ENST00000397174 SENP3-EIF4A1A0A087X0R7 540 aa13.95□□□□□ -0.18
SCMH1-209ENST00000397174 DCAF11Q8TEB1 546 aa13.95□□□□□ -0.18
SCMH1-209ENST00000397174 TOP2BQ02880 1626 aa13.93□□□□□ -0.18
SCMH1-209ENST00000397174 CC2D2AQ9P2K1 1620 aa13.93□□□□□ -0.18
SCMH1-209ENST00000397174 MAP3K1Q13233 1512 aa13.92□□□□□ -0.18
SCMH1-209ENST00000397174 SLC4A3P48751 1232 aa13.92□□□□□ -0.18
SCMH1-209ENST00000397174 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.18
SCMH1-209ENST00000397174 DDRGK1Q96HY6 314 aa13.92□□□□□ -0.18
SCMH1-209ENST00000397174 CCDC7Q96M83 1385 aa13.9□□□□□ -0.18
SCMH1-209ENST00000397174 CCDC18Q5T9S5 1454 aa13.9□□□□□ -0.18
SCMH1-209ENST00000397174 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
SCMH1-209ENST00000397174 MS4A1P11836 297 aa13.89□□□□□ -0.19
SCMH1-209ENST00000397174 EXOC6Q8TAG9 804 aa13.89□□□□□ -0.19
SCMH1-209ENST00000397174 NCOA1Q15788 1441 aa13.87□□□□□ -0.19
SCMH1-209ENST00000397174 UACAQ9BZF9 1416 aa13.87□□□□□ -0.19
SCMH1-209ENST00000397174 RRAGDQ9NQL2 400 aaPredicted RBP13.87□□□□□ -0.19
SCMH1-209ENST00000397174 CNGB1Q14028 1251 aaPredicted RBP13.86□□□□□ -0.19
SCMH1-209ENST00000397174 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
SCMH1-209ENST00000397174 FRAT2O75474 233 aaPredicted RBP13.85□□□□□ -0.19
SCMH1-209ENST00000397174 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
SCMH1-209ENST00000397174 SKAP1Q86WV1 359 aa13.84□□□□□ -0.19
SCMH1-209ENST00000397174 RRP1P56182 461 aaKnown RBP13.84□□□□□ -0.19
SCMH1-209ENST00000397174 BIVM-ERCC5R4GMW8 1640 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms