RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 KIAA0586Q9BVV6 1533 aa24.66■■□□□ 1.54
SEC13-208ENST00000397109 ERCC6L2Q5T890 1561 aa24.65■■□□□ 1.54
SEC13-208ENST00000397109 PRG4Q92954 1404 aaPredicted RBP24.64■■□□□ 1.54
SEC13-208ENST00000397109 RAPGEF2Q9Y4G8 1499 aa24.58■■□□□ 1.52
SEC13-208ENST00000397109 TRHP20396 242 aaPredicted RBP24.49■■□□□ 1.51
SEC13-208ENST00000397109 IQGAP2Q13576 1575 aa24.46■■□□□ 1.51
SEC13-208ENST00000397109 PRXQ9BXM0 1461 aa24.43■■□□□ 1.5
SEC13-208ENST00000397109 CARMIL2Q6F5E8 1435 aa24.42■■□□□ 1.5
SEC13-208ENST00000397109 EEA1Q15075 1411 aa24.41■■□□□ 1.5
SEC13-208ENST00000397109 CSRNP3Q8WYN3 585 aa24.4■■□□□ 1.5
SEC13-208ENST00000397109 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
SEC13-208ENST00000397109 PTPRGP23470 1445 aa24.35■■□□□ 1.49
SEC13-208ENST00000397109 TNIKQ9UKE5 1360 aa24.34■■□□□ 1.49
SEC13-208ENST00000397109 UGGT2Q9NYU1 1516 aa24.33■■□□□ 1.49
SEC13-208ENST00000397109 NPM1P06748 294 aaKnown RBP eCLIP24.32■■□□□ 1.48
SEC13-208ENST00000397109 CTTNBP2Q8WZ74 1663 aa24.3■■□□□ 1.48
SEC13-208ENST00000397109 DISP1Q96F81 1524 aa24.29■■□□□ 1.48
SEC13-208ENST00000397109 TTBK1Q5TCY1 1321 aaPredicted RBP24.25■■□□□ 1.47
SEC13-208ENST00000397109 ADCY10Q96PN6 1610 aa24.25■■□□□ 1.47
SEC13-208ENST00000397109 FAM9AQ8IZU1 332 aaPredicted RBP24.23■■□□□ 1.47
SEC13-208ENST00000397109 GOLGA3Q08378 1498 aa24.22■■□□□ 1.47
SEC13-208ENST00000397109 KIAA0556O60303 1618 aa24.21■■□□□ 1.47
SEC13-208ENST00000397109 UACAQ9BZF9 1416 aa24.17■■□□□ 1.46
SEC13-208ENST00000397109 MAPKBP1O60336 1514 aa24.17■■□□□ 1.46
SEC13-208ENST00000397109 UHRF1BP1LA0JNW5 1464 aa24.16■■□□□ 1.46
SEC13-208ENST00000397109 ABCC2Q92887 1545 aa24.13■■□□□ 1.45
SEC13-208ENST00000397109 KIF21BO75037 1637 aa24.1■■□□□ 1.45
SEC13-208ENST00000397109 ABCC10Q5T3U5 1492 aa24.1■■□□□ 1.45
SEC13-208ENST00000397109 FAM69CQ0P6D2 419 aa24.07■■□□□ 1.44
SEC13-208ENST00000397109 KIF13AQ9H1H9 1805 aa24.07■■□□□ 1.44
SEC13-208ENST00000397109 KDM5BQ9UGL1 1544 aa24.03■■□□□ 1.44
SEC13-208ENST00000397109 PLB1Q6P1J6 1458 aa24.02■■□□□ 1.43
SEC13-208ENST00000397109 DIP2BQ9P265 1576 aa24.01■■□□□ 1.43
SEC13-208ENST00000397109 P3H3Q8IVL6 736 aa24■■□□□ 1.43
SEC13-208ENST00000397109 ASXL2Q76L83 1435 aa24■■□□□ 1.43
SEC13-208ENST00000397109 SAMD9Q5K651 1589 aa23.99■■□□□ 1.43
SEC13-208ENST00000397109 ABCA8O94911 1581 aa23.97■■□□□ 1.43
SEC13-208ENST00000397109 UBTFP17480 764 aaKnown RBP23.96■■□□□ 1.43
SEC13-208ENST00000397109 ZCCHC11Q5TAX3 1644 aaKnown RBP23.94■■□□□ 1.42
SEC13-208ENST00000397109 RANGAP1P46060 587 aaPredicted RBP23.94■■□□□ 1.42
SEC13-208ENST00000397109 EHMT2Q96KQ7 1210 aa23.9■■□□□ 1.42
SEC13-208ENST00000397109 EFCAB5A4FU69 1503 aa23.89■■□□□ 1.41
SEC13-208ENST00000397109 GLI2P10070 1586 aa23.88■■□□□ 1.41
SEC13-208ENST00000397109 EPRSP07814 1512 aaKnown RBP23.85■■□□□ 1.41
SEC13-208ENST00000397109 FHOD3Q2V2M9 1422 aa23.84■■□□□ 1.41
SEC13-208ENST00000397109 WDR7Q9Y4E6 1490 aa23.84■■□□□ 1.41
SEC13-208ENST00000397109 TSPOAP1O95153 1857 aa23.82■■□□□ 1.4
SEC13-208ENST00000397109 RAPGEF6Q8TEU7 1601 aa23.81■■□□□ 1.4
SEC13-208ENST00000397109 ATP10BO94823 1461 aa23.8■■□□□ 1.4
SEC13-208ENST00000397109 ARID3CA6NKF2 412 aa23.76■■□□□ 1.39
SEC13-208ENST00000397109 KCNH8Q96L42 1107 aa23.75■■□□□ 1.39
SEC13-208ENST00000397109 MAP3K4Q9Y6R4 1608 aa23.73■■□□□ 1.39
SEC13-208ENST00000397109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
SEC13-208ENST00000397109 HNRNPUL2Q1KMD3 747 aaKnown RBP23.72■■□□□ 1.39
SEC13-208ENST00000397109 NUP153P49790 1475 aaKnown RBP23.72■■□□□ 1.39
SEC13-208ENST00000397109 ARHGAP35Q9NRY4 1499 aa23.71■■□□□ 1.39
SEC13-208ENST00000397109 TEX14Q8IWB6 1497 aa23.7■■□□□ 1.38
SEC13-208ENST00000397109 FMN1Q68DA7 1419 aa23.7■■□□□ 1.38
SEC13-208ENST00000397109 PPRC1Q5VV67 1664 aaKnown RBP23.69■■□□□ 1.38
SEC13-208ENST00000397109 KDM6BO15054 1643 aa23.69■■□□□ 1.38
SEC13-208ENST00000397109 CD109Q6YHK3 1445 aa23.67■■□□□ 1.38
SEC13-208ENST00000397109 CFAP43Q8NDM7 1665 aa23.65■■□□□ 1.38
SEC13-208ENST00000397109 PLEKHD1A6NEE1 506 aa23.63■■□□□ 1.37
SEC13-208ENST00000397109 MAGI3Q5TCQ9 1506 aa23.63■■□□□ 1.37
SEC13-208ENST00000397109 ATP1B4Q9UN42 357 aaPredicted RBP23.58■■□□□ 1.37
SEC13-208ENST00000397109 ABCA9Q8IUA7 1624 aa23.56■■□□□ 1.36
SEC13-208ENST00000397109 HECW1Q76N89 1606 aa23.55■■□□□ 1.36
SEC13-208ENST00000397109 CLIP1P30622 1438 aa23.54■■□□□ 1.36
SEC13-208ENST00000397109 CDK11AQ9UQ88 783 aaPredicted RBP23.52■■□□□ 1.36
SEC13-208ENST00000397109 CDK13Q14004 1512 aaKnown RBP23.52■■□□□ 1.36
SEC13-208ENST00000397109 COL17A1Q9UMD9 1497 aaPredicted RBP23.51■■□□□ 1.35
SEC13-208ENST00000397109 PHLDB1Q86UU1 1377 aa23.49■■□□□ 1.35
SEC13-208ENST00000397109 CASKIN1Q8WXD9 1431 aa23.47■■□□□ 1.35
SEC13-208ENST00000397109 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
SEC13-208ENST00000397109 NEO1Q92859 1461 aa23.42■■□□□ 1.34
SEC13-208ENST00000397109 ARAP3Q8WWN8 1544 aa23.42■■□□□ 1.34
SEC13-208ENST00000397109 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.41■■□□□ 1.34
SEC13-208ENST00000397109 CCDC18Q5T9S5 1454 aa23.4■■□□□ 1.34
SEC13-208ENST00000397109 PCF11O94913 1555 aaKnown RBP23.4■■□□□ 1.34
SEC13-208ENST00000397109 FYCO1Q9BQS8 1478 aa23.39■■□□□ 1.34
SEC13-208ENST00000397109 TROQ12816 1431 aaPredicted RBP23.38■■□□□ 1.33
SEC13-208ENST00000397109 CEP162Q5TB80 1403 aa23.36■■□□□ 1.33
SEC13-208ENST00000397109 LRRIQ1Q96JM4 1722 aa23.35■■□□□ 1.33
SEC13-208ENST00000397109 TTC37Q6PGP7 1564 aa23.35■■□□□ 1.33
SEC13-208ENST00000397109 LOC105371045A0A1W2PR82 267 aa23.33■■□□□ 1.33
SEC13-208ENST00000397109 FANCAO15360 1455 aa23.33■■□□□ 1.32
SEC13-208ENST00000397109 CFAP74Q9C0B2 1584 aa23.32■■□□□ 1.32
SEC13-208ENST00000397109 KIF14Q15058 1648 aa23.32■■□□□ 1.32
SEC13-208ENST00000397109 PLCH2O75038 1416 aa23.31■■□□□ 1.32
SEC13-208ENST00000397109 AKNAQ7Z591 1439 aa23.3■■□□□ 1.32
SEC13-208ENST00000397109 RAPGEF3O95398 923 aa23.29■■□□□ 1.32
SEC13-208ENST00000397109 EFCAB2Q5VUJ9 269 aa23.27■■□□□ 1.32
SEC13-208ENST00000397109 DENND4BO75064 1496 aaPredicted RBP23.26■■□□□ 1.31
SEC13-208ENST00000397109 KDM4FA0A1W2PPD8 638 aa23.25■■□□□ 1.31
SEC13-208ENST00000397109 MYO5CQ9NQX4 1742 aa23.25■■□□□ 1.31
SEC13-208ENST00000397109 ADGRL1O94910 1474 aa23.19■■□□□ 1.3
SEC13-208ENST00000397109 FRMPD1Q5SYB0 1578 aa23.19■■□□□ 1.3
SEC13-208ENST00000397109 SCAPERQ9BY12 1400 aa23.18■■□□□ 1.3
SEC13-208ENST00000397109 RICTORQ6R327 1708 aa23.17■■□□□ 1.3
SEC13-208ENST00000397109 ARHGAP5Q13017 1502 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms