RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 RUSC2Q8N2Y8 1516 aa32.65■■■□□ 2.82
MCF2L-207ENST00000397024 CUL7Q14999 1698 aa32.59■■■□□ 2.81
MCF2L-207ENST00000397024 CARMIL1Q5VZK9 1371 aa32.57■■■□□ 2.8
MCF2L-207ENST00000397024 KIAA0586Q9BVV6 1533 aa32.55■■■□□ 2.8
MCF2L-207ENST00000397024 ADCY10Q96PN6 1610 aa32.27■■■□□ 2.76
MCF2L-207ENST00000397024 RAPGEF2Q9Y4G8 1499 aa32.25■■■□□ 2.75
MCF2L-207ENST00000397024 NPM1P06748 294 aaKnown RBP eCLIP32.25■■■□□ 2.75
MCF2L-207ENST00000397024 IQGAP2Q13576 1575 aa32.24■■■□□ 2.75
MCF2L-207ENST00000397024 PTPRGP23470 1445 aa32.23■■■□□ 2.75
MCF2L-207ENST00000397024 TTBK1Q5TCY1 1321 aaPredicted RBP32.23■■■□□ 2.75
MCF2L-207ENST00000397024 KIF13AQ9H1H9 1805 aa32.22■■■□□ 2.75
MCF2L-207ENST00000397024 CARMIL2Q6F5E8 1435 aa32.18■■■□□ 2.74
MCF2L-207ENST00000397024 TNIKQ9UKE5 1360 aa32.17■■■□□ 2.74
MCF2L-207ENST00000397024 FAM69CQ0P6D2 419 aa32.14■■■□□ 2.74
MCF2L-207ENST00000397024 MAPKBP1O60336 1514 aa32.14■■■□□ 2.74
MCF2L-207ENST00000397024 DISP1Q96F81 1524 aa32.13■■■□□ 2.73
MCF2L-207ENST00000397024 ABCC10Q5T3U5 1492 aa32.12■■■□□ 2.73
MCF2L-207ENST00000397024 UGGT2Q9NYU1 1516 aa32.07■■■□□ 2.72
MCF2L-207ENST00000397024 DIP2BQ9P265 1576 aa32.02■■■□□ 2.72
MCF2L-207ENST00000397024 PRXQ9BXM0 1461 aa32.02■■■□□ 2.72
MCF2L-207ENST00000397024 ABCC2Q92887 1545 aa31.99■■■□□ 2.71
MCF2L-207ENST00000397024 UACAQ9BZF9 1416 aa31.97■■■□□ 2.71
MCF2L-207ENST00000397024 UHRF1BP1LA0JNW5 1464 aa31.96■■■□□ 2.71
MCF2L-207ENST00000397024 KIAA0556O60303 1618 aa31.94■■■□□ 2.7
MCF2L-207ENST00000397024 CTTNBP2Q8WZ74 1663 aa31.92■■■□□ 2.7
MCF2L-207ENST00000397024 ASXL2Q76L83 1435 aa31.89■■■□□ 2.7
MCF2L-207ENST00000397024 CSRNP3Q8WYN3 585 aa31.87■■■□□ 2.69
MCF2L-207ENST00000397024 TSPOAP1O95153 1857 aa31.83■■■□□ 2.69
MCF2L-207ENST00000397024 KDM5BQ9UGL1 1544 aa31.82■■■□□ 2.68
MCF2L-207ENST00000397024 PLB1Q6P1J6 1458 aa31.82■■■□□ 2.68
MCF2L-207ENST00000397024 GOLGA3Q08378 1498 aa31.78■■■□□ 2.68
MCF2L-207ENST00000397024 ZCCHC11Q5TAX3 1644 aaKnown RBP31.74■■■□□ 2.67
MCF2L-207ENST00000397024 AEBP2Q6ZN18 517 aaPredicted RBP31.73■■■□□ 2.67
MCF2L-207ENST00000397024 GLI2P10070 1586 aa31.72■■■□□ 2.67
MCF2L-207ENST00000397024 P3H3Q8IVL6 736 aa31.69■■■□□ 2.66
MCF2L-207ENST00000397024 FAM9AQ8IZU1 332 aaPredicted RBP31.69■■■□□ 2.66
MCF2L-207ENST00000397024 EPRSP07814 1512 aaKnown RBP31.68■■■□□ 2.66
MCF2L-207ENST00000397024 ABCA8O94911 1581 aa31.67■■■□□ 2.66
MCF2L-207ENST00000397024 KDM6BO15054 1643 aa31.67■■■□□ 2.66
MCF2L-207ENST00000397024 EEA1Q15075 1411 aa31.66■■■□□ 2.66
MCF2L-207ENST00000397024 PPRC1Q5VV67 1664 aaKnown RBP31.65■■■□□ 2.66
MCF2L-207ENST00000397024 WDR7Q9Y4E6 1490 aa31.57■■■□□ 2.64
MCF2L-207ENST00000397024 MAP3K4Q9Y6R4 1608 aa31.56■■■□□ 2.64
MCF2L-207ENST00000397024 CHIC1Q5VXU3 224 aa31.55■■■□□ 2.64
MCF2L-207ENST00000397024 SAMD9Q5K651 1589 aa31.52■■■□□ 2.64
MCF2L-207ENST00000397024 KCNH8Q96L42 1107 aa31.52■■■□□ 2.64
MCF2L-207ENST00000397024 ARID3CA6NKF2 412 aa31.51■■■□□ 2.63
MCF2L-207ENST00000397024 RANGAP1P46060 587 aaPredicted RBP31.51■■■□□ 2.63
MCF2L-207ENST00000397024 COL17A1Q9UMD9 1497 aaPredicted RBP31.49■■■□□ 2.63
MCF2L-207ENST00000397024 ATP10BO94823 1461 aa31.46■■■□□ 2.63
MCF2L-207ENST00000397024 TEX14Q8IWB6 1497 aa31.41■■■□□ 2.62
MCF2L-207ENST00000397024 KIF21BO75037 1637 aa31.41■■■□□ 2.62
MCF2L-207ENST00000397024 CD109Q6YHK3 1445 aa31.39■■■□□ 2.62
MCF2L-207ENST00000397024 KDM4FA0A1W2PPD8 638 aa31.38■■■□□ 2.61
MCF2L-207ENST00000397024 EHMT2Q96KQ7 1210 aa31.37■■■□□ 2.61
MCF2L-207ENST00000397024 FHOD3Q2V2M9 1422 aa31.37■■■□□ 2.61
MCF2L-207ENST00000397024 RAPGEF6Q8TEU7 1601 aa31.35■■■□□ 2.61
MCF2L-207ENST00000397024 CFAP43Q8NDM7 1665 aa31.33■■■□□ 2.61
MCF2L-207ENST00000397024 MAGI3Q5TCQ9 1506 aa31.33■■■□□ 2.61
MCF2L-207ENST00000397024 NUP153P49790 1475 aaKnown RBP31.28■■■□□ 2.6
MCF2L-207ENST00000397024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.26■■■□□ 2.59
MCF2L-207ENST00000397024 HNRNPUL2Q1KMD3 747 aaKnown RBP31.26■■■□□ 2.59
MCF2L-207ENST00000397024 UBTFP17480 764 aaKnown RBP31.25■■■□□ 2.59
MCF2L-207ENST00000397024 EFCAB5A4FU69 1503 aa31.21■■■□□ 2.59
MCF2L-207ENST00000397024 ABCA9Q8IUA7 1624 aa31.16■■■□□ 2.58
MCF2L-207ENST00000397024 ADGRL1O94910 1474 aa31.1■■■□□ 2.57
MCF2L-207ENST00000397024 PLEKHD1A6NEE1 506 aa31.1■■■□□ 2.57
MCF2L-207ENST00000397024 ARAP3Q8WWN8 1544 aa31.09■■■□□ 2.57
MCF2L-207ENST00000397024 ARHGAP35Q9NRY4 1499 aa31.07■■■□□ 2.56
MCF2L-207ENST00000397024 PHLDB1Q86UU1 1377 aa31.02■■■□□ 2.56
MCF2L-207ENST00000397024 CDK13Q14004 1512 aaKnown RBP31.01■■■□□ 2.55
MCF2L-207ENST00000397024 RAPGEF3O95398 923 aa31■■■□□ 2.55
MCF2L-207ENST00000397024 NEO1Q92859 1461 aa30.98■■■□□ 2.55
MCF2L-207ENST00000397024 ATP1B4Q9UN42 357 aaPredicted RBP30.98■■■□□ 2.55
MCF2L-207ENST00000397024 FMN1Q68DA7 1419 aa30.96■■■□□ 2.55
MCF2L-207ENST00000397024 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.93■■■□□ 2.54
MCF2L-207ENST00000397024 TTC37Q6PGP7 1564 aa30.88■■■□□ 2.53
MCF2L-207ENST00000397024 HECW1Q76N89 1606 aa30.86■■■□□ 2.53
MCF2L-207ENST00000397024 FRMPD1Q5SYB0 1578 aa30.85■■■□□ 2.53
MCF2L-207ENST00000397024 AKNAQ7Z591 1439 aa30.85■■■□□ 2.53
MCF2L-207ENST00000397024 FANCAO15360 1455 aa30.83■■■□□ 2.53
MCF2L-207ENST00000397024 DENND4BO75064 1496 aaPredicted RBP30.78■■■□□ 2.52
MCF2L-207ENST00000397024 CDK11AQ9UQ88 783 aaPredicted RBP30.78■■■□□ 2.52
MCF2L-207ENST00000397024 LRRIQ1Q96JM4 1722 aa30.76■■■□□ 2.52
MCF2L-207ENST00000397024 PLCH2O75038 1416 aa30.76■■■□□ 2.51
MCF2L-207ENST00000397024 RICTORQ6R327 1708 aa30.73■■■□□ 2.51
MCF2L-207ENST00000397024 CFAP74Q9C0B2 1584 aa30.72■■■□□ 2.51
MCF2L-207ENST00000397024 TROQ12816 1431 aaPredicted RBP30.71■■■□□ 2.51
MCF2L-207ENST00000397024 KIF14Q15058 1648 aa30.7■■■□□ 2.51
MCF2L-207ENST00000397024 CASKIN1Q8WXD9 1431 aa30.7■■■□□ 2.5
MCF2L-207ENST00000397024 PCF11O94913 1555 aaKnown RBP30.67■■■□□ 2.5
MCF2L-207ENST00000397024 SCAPERQ9BY12 1400 aa30.66■■■□□ 2.5
MCF2L-207ENST00000397024 EFCAB2Q5VUJ9 269 aa30.65■■■□□ 2.5
MCF2L-207ENST00000397024 ARID4BQ4LE39 1312 aaPredicted RBP30.65■■■□□ 2.5
MCF2L-207ENST00000397024 CLIP1P30622 1438 aa30.64■■■□□ 2.5
MCF2L-207ENST00000397024 ADAMTSL3P82987 1691 aa30.63■■■□□ 2.49
MCF2L-207ENST00000397024 MYO5CQ9NQX4 1742 aa30.62■■■□□ 2.49
MCF2L-207ENST00000397024 ARHGEF40Q8TER5 1519 aa30.62■■■□□ 2.49
MCF2L-207ENST00000397024 YEATS2Q9ULM3 1422 aa30.61■■■□□ 2.49
MCF2L-207ENST00000397024 ZMYM4Q5VZL5 1548 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms