RNA–Protein interactions for RNA: ENST00000397010.6

PPARG-205, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPARG, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-205ENST00000397010 CEP162Q5TB80 1403 aa22.56■■□□□ 1.2
PPARG-205ENST00000397010 CEP170Q5SW79 1584 aa22.56■■□□□ 1.2
PPARG-205ENST00000397010 RANGAP1P46060 587 aaPredicted RBP22.54■■□□□ 1.2
PPARG-205ENST00000397010 IQGAP2Q13576 1575 aa22.48■■□□□ 1.19
PPARG-205ENST00000397010 NUP160Q12769 1436 aa22.47■■□□□ 1.19
PPARG-205ENST00000397010 CLIP1P30622 1438 aa22.46■■□□□ 1.19
PPARG-205ENST00000397010 KIAA0586Q9BVV6 1533 aa22.43■■□□□ 1.18
PPARG-205ENST00000397010 ARHGAP35Q9NRY4 1499 aa22.38■■□□□ 1.17
PPARG-205ENST00000397010 SAMD9Q5K651 1589 aa22.36■■□□□ 1.17
PPARG-205ENST00000397010 EFCAB5A4FU69 1503 aa22.34■■□□□ 1.17
PPARG-205ENST00000397010 ARAP1Q96P48 1450 aa22.33■■□□□ 1.17
PPARG-205ENST00000397010 UGGT2Q9NYU1 1516 aa22.33■■□□□ 1.17
PPARG-205ENST00000397010 CLASP1Q7Z460 1538 aa22.33■■□□□ 1.16
PPARG-205ENST00000397010 P3H3Q8IVL6 736 aa22.29■■□□□ 1.16
PPARG-205ENST00000397010 SHROOM2Q13796 1616 aa22.28■■□□□ 1.16
PPARG-205ENST00000397010 FHOD3Q2V2M9 1422 aa22.28■■□□□ 1.16
PPARG-205ENST00000397010 KIAA0556O60303 1618 aa22.27■■□□□ 1.16
PPARG-205ENST00000397010 DISP1Q96F81 1524 aa22.26■■□□□ 1.15
PPARG-205ENST00000397010 JPH4Q96JJ6 628 aa22.23■■□□□ 1.15
PPARG-205ENST00000397010 VPS8Q8N3P4 1428 aa22.2■■□□□ 1.14
PPARG-205ENST00000397010 OSCARQ8IYS5 282 aa22.19■■□□□ 1.14
PPARG-205ENST00000397010 ERCC6L2Q5T890 1561 aa22.18■■□□□ 1.14
PPARG-205ENST00000397010 PRG4Q92954 1404 aaPredicted RBP22.17■■□□□ 1.14
PPARG-205ENST00000397010 PCF11O94913 1555 aaKnown RBP22.15■■□□□ 1.14
PPARG-205ENST00000397010 CARMIL2Q6F5E8 1435 aa22.15■■□□□ 1.14
PPARG-205ENST00000397010 TTBK1Q5TCY1 1321 aaPredicted RBP22.12■■□□□ 1.13
PPARG-205ENST00000397010 FMN1Q68DA7 1419 aa22.09■■□□□ 1.13
PPARG-205ENST00000397010 LRRIQ1Q96JM4 1722 aa22.06■■□□□ 1.12
PPARG-205ENST00000397010 FYCO1Q9BQS8 1478 aa22.03■■□□□ 1.12
PPARG-205ENST00000397010 CASKIN1Q8WXD9 1431 aa22.02■■□□□ 1.11
PPARG-205ENST00000397010 RAPGEF6Q8TEU7 1601 aa22.01■■□□□ 1.11
PPARG-205ENST00000397010 ATP1B4Q9UN42 357 aaPredicted RBP21.99■■□□□ 1.11
PPARG-205ENST00000397010 PLB1Q6P1J6 1458 aa21.99■■□□□ 1.11
PPARG-205ENST00000397010 HECW1Q76N89 1606 aa21.98■■□□□ 1.11
PPARG-205ENST00000397010 CFAP43Q8NDM7 1665 aa21.97■■□□□ 1.11
PPARG-205ENST00000397010 PTPRGP23470 1445 aa21.97■■□□□ 1.11
PPARG-205ENST00000397010 PPARGC1BQ86YN6 1023 aaKnown RBP21.96■■□□□ 1.11
PPARG-205ENST00000397010 ABCA8O94911 1581 aa21.95■■□□□ 1.1
PPARG-205ENST00000397010 TIAM1Q13009 1591 aa21.94■■□□□ 1.1
PPARG-205ENST00000397010 ARHGEF11O15085 1522 aa21.93■■□□□ 1.1
PPARG-205ENST00000397010 NUP153P49790 1475 aaKnown RBP21.91■■□□□ 1.1
PPARG-205ENST00000397010 APLP2Q06481 763 aa21.9■■□□□ 1.1
PPARG-205ENST00000397010 ARID3CA6NKF2 412 aa21.9■■□□□ 1.1
PPARG-205ENST00000397010 RIMBP3CA6NJZ7 1639 aa21.89■■□□□ 1.1
PPARG-205ENST00000397010 RIMBP3BA6NNM3 1639 aa21.89■■□□□ 1.1
PPARG-205ENST00000397010 RIMBP3Q9UFD9 1639 aa21.89■■□□□ 1.1
PPARG-205ENST00000397010 CDK13Q14004 1512 aaKnown RBP21.89■■□□□ 1.1
PPARG-205ENST00000397010 EPRSP07814 1512 aaKnown RBP21.88■■□□□ 1.09
PPARG-205ENST00000397010 UACAQ9BZF9 1416 aa21.85■■□□□ 1.09
PPARG-205ENST00000397010 CCDC18Q5T9S5 1454 aa21.85■■□□□ 1.09
PPARG-205ENST00000397010 MAP3K1Q13233 1512 aa21.85■■□□□ 1.09
PPARG-205ENST00000397010 ABCC2Q92887 1545 aa21.84■■□□□ 1.09
PPARG-205ENST00000397010 KANK4Q5T7N3 995 aaPredicted RBP21.82■■□□□ 1.08
PPARG-205ENST00000397010 ADCY10Q96PN6 1610 aa21.82■■□□□ 1.08
PPARG-205ENST00000397010 LRRC9Q6ZRR7 1453 aa21.79■■□□□ 1.08
PPARG-205ENST00000397010 MAGI3Q5TCQ9 1506 aa21.79■■□□□ 1.08
PPARG-205ENST00000397010 ZCCHC11Q5TAX3 1644 aaKnown RBP21.76■■□□□ 1.07
PPARG-205ENST00000397010 UHRF1BP1LA0JNW5 1464 aa21.75■■□□□ 1.07
PPARG-205ENST00000397010 ATP10BO94823 1461 aa21.75■■□□□ 1.07
PPARG-205ENST00000397010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.75■■□□□ 1.07
PPARG-205ENST00000397010 HNRNPUL2Q1KMD3 747 aaKnown RBP21.75■■□□□ 1.07
PPARG-205ENST00000397010 EHBP1L1Q8N3D4 1523 aa21.73■■□□□ 1.07
PPARG-205ENST00000397010 MTUS2Q5JR59 1369 aa21.72■■□□□ 1.07
PPARG-205ENST00000397010 KDM5BQ9UGL1 1544 aa21.69■■□□□ 1.06
PPARG-205ENST00000397010 SUPT6HQ7KZ85 1726 aaKnown RBP21.68■■□□□ 1.06
PPARG-205ENST00000397010 CYB5RLQ6IPT4 315 aa21.67■■□□□ 1.06
PPARG-205ENST00000397010 KIF14Q15058 1648 aa21.65■■□□□ 1.06
PPARG-205ENST00000397010 TROQ12816 1431 aaPredicted RBP21.62■■□□□ 1.05
PPARG-205ENST00000397010 CDK11AQ9UQ88 783 aaPredicted RBP21.62■■□□□ 1.05
PPARG-205ENST00000397010 NCOA2Q15596 1464 aa21.61■■□□□ 1.05
PPARG-205ENST00000397010 PHLDB1Q86UU1 1377 aa21.58■■□□□ 1.04
PPARG-205ENST00000397010 PLEKHD1A6NEE1 506 aa21.57■■□□□ 1.04
PPARG-205ENST00000397010 TRIM26Q12899 539 aaPredicted RBP21.53■■□□□ 1.04
PPARG-205ENST00000397010 ASXL2Q76L83 1435 aa21.51■■□□□ 1.03
PPARG-205ENST00000397010 WDR7Q9Y4E6 1490 aa21.51■■□□□ 1.03
PPARG-205ENST00000397010 NPM1P06748 294 aaKnown RBP eCLIP21.51■■□□□ 1.03
PPARG-205ENST00000397010 CDC42BPAQ5VT25 1732 aa21.51■■□□□ 1.03
PPARG-205ENST00000397010 TTC37Q6PGP7 1564 aa21.5■■□□□ 1.03
PPARG-205ENST00000397010 ITSN2Q9NZM3 1697 aa21.49■■□□□ 1.03
PPARG-205ENST00000397010 ABCC10Q5T3U5 1492 aa21.48■■□□□ 1.03
PPARG-205ENST00000397010 MYOM3Q5VTT5 1437 aa21.48■■□□□ 1.03
PPARG-205ENST00000397010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.47■■□□□ 1.03
PPARG-205ENST00000397010 KCNH8Q96L42 1107 aa21.47■■□□□ 1.03
PPARG-205ENST00000397010 PCGF6Q9BYE7 350 aa21.47■■□□□ 1.03
PPARG-205ENST00000397010 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
PPARG-205ENST00000397010 DNAJC5Q9H3Z4 198 aa21.46■■□□□ 1.03
PPARG-205ENST00000397010 MAPKBP1O60336 1514 aa21.45■■□□□ 1.02
PPARG-205ENST00000397010 MYO5CQ9NQX4 1742 aa21.44■■□□□ 1.02
PPARG-205ENST00000397010 FGD6Q6ZV73 1430 aa21.44■■□□□ 1.02
PPARG-205ENST00000397010 CCNB3Q8WWL7 1395 aa21.44■■□□□ 1.02
PPARG-205ENST00000397010 CDC42BPBQ9Y5S2 1711 aa21.43■■□□□ 1.02
PPARG-205ENST00000397010 PREX2Q70Z35 1606 aa21.42■■□□□ 1.02
PPARG-205ENST00000397010 PTPN23Q9H3S7 1636 aa21.42■■□□□ 1.02
PPARG-205ENST00000397010 GPATCH8Q9UKJ3 1502 aaKnown RBP21.41■■□□□ 1.02
PPARG-205ENST00000397010 ABCA9Q8IUA7 1624 aa21.39■■□□□ 1.01
PPARG-205ENST00000397010 FAM50AQ14320 339 aaKnown RBP21.36■■□□□ 1.01
PPARG-205ENST00000397010 MIA2Q96PC5 1412 aa21.35■■□□□ 1.01
PPARG-205ENST00000397010 ARHGAP5Q13017 1502 aa21.32■■□□□ 1
PPARG-205ENST00000397010 DIP2BQ9P265 1576 aa21.32■■□□□ 1
PPARG-205ENST00000397010 TCOF1Q13428 1488 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms