RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.47
NUP98-205ENST00000397007 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.47
NUP98-205ENST00000397007 ERCC6L2Q5T890 1561 aa17.99■□□□□ 0.47
NUP98-205ENST00000397007 DISP1Q96F81 1524 aa17.97■□□□□ 0.47
NUP98-205ENST00000397007 KIAA0556O60303 1618 aa17.96■□□□□ 0.46
NUP98-205ENST00000397007 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
NUP98-205ENST00000397007 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
NUP98-205ENST00000397007 GOLGA3Q08378 1498 aa17.93■□□□□ 0.46
NUP98-205ENST00000397007 OSCARQ8IYS5 282 aa17.87■□□□□ 0.45
NUP98-205ENST00000397007 EFCAB5A4FU69 1503 aa17.87■□□□□ 0.45
NUP98-205ENST00000397007 ARAP1Q96P48 1450 aa17.85■□□□□ 0.45
NUP98-205ENST00000397007 CHMP7Q8WUX9 453 aaPredicted RBP17.85■□□□□ 0.45
NUP98-205ENST00000397007 DNAJC5Q9H3Z4 198 aa17.83■□□□□ 0.45
NUP98-205ENST00000397007 LRRIQ1Q96JM4 1722 aa17.82■□□□□ 0.44
NUP98-205ENST00000397007 ABCA8O94911 1581 aa17.79■□□□□ 0.44
NUP98-205ENST00000397007 ADCY10Q96PN6 1610 aa17.78■□□□□ 0.44
NUP98-205ENST00000397007 TNIKQ9UKE5 1360 aa17.77■□□□□ 0.43
NUP98-205ENST00000397007 ARHGAP35Q9NRY4 1499 aa17.75■□□□□ 0.43
NUP98-205ENST00000397007 PRG4Q92954 1404 aaPredicted RBP17.75■□□□□ 0.43
NUP98-205ENST00000397007 UHRF1BP1LA0JNW5 1464 aa17.74■□□□□ 0.43
NUP98-205ENST00000397007 JPH4Q96JJ6 628 aa17.68■□□□□ 0.42
NUP98-205ENST00000397007 RAPGEF6Q8TEU7 1601 aa17.66■□□□□ 0.42
NUP98-205ENST00000397007 ABCC2Q92887 1545 aa17.66■□□□□ 0.42
NUP98-205ENST00000397007 FBLN2P98095 1184 aa17.64■□□□□ 0.41
NUP98-205ENST00000397007 ZCCHC11Q5TAX3 1644 aaKnown RBP17.62■□□□□ 0.41
NUP98-205ENST00000397007 KDM5BQ9UGL1 1544 aa17.62■□□□□ 0.41
NUP98-205ENST00000397007 MAPKBP1O60336 1514 aa17.61■□□□□ 0.41
NUP98-205ENST00000397007 CARMIL2Q6F5E8 1435 aa17.6■□□□□ 0.41
NUP98-205ENST00000397007 PCF11O94913 1555 aaKnown RBP17.58■□□□□ 0.41
NUP98-205ENST00000397007 KIF13AQ9H1H9 1805 aa17.58■□□□□ 0.4
NUP98-205ENST00000397007 CFAP43Q8NDM7 1665 aa17.57■□□□□ 0.4
NUP98-205ENST00000397007 CEP162Q5TB80 1403 aa17.56■□□□□ 0.4
NUP98-205ENST00000397007 FAM9AQ8IZU1 332 aaPredicted RBP17.56■□□□□ 0.4
NUP98-205ENST00000397007 NUP153P49790 1475 aaKnown RBP17.55■□□□□ 0.4
NUP98-205ENST00000397007 HECW1Q76N89 1606 aa17.53■□□□□ 0.4
NUP98-205ENST00000397007 PLB1Q6P1J6 1458 aa17.53■□□□□ 0.4
NUP98-205ENST00000397007 UACAQ9BZF9 1416 aa17.52■□□□□ 0.4
NUP98-205ENST00000397007 FHOD3Q2V2M9 1422 aa17.52■□□□□ 0.4
NUP98-205ENST00000397007 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
NUP98-205ENST00000397007 CLIP1P30622 1438 aa17.5■□□□□ 0.39
NUP98-205ENST00000397007 GLI2P10070 1586 aa17.49■□□□□ 0.39
NUP98-205ENST00000397007 CASKIN1Q8WXD9 1431 aa17.49■□□□□ 0.39
NUP98-205ENST00000397007 PPRC1Q5VV67 1664 aaKnown RBP17.49■□□□□ 0.39
NUP98-205ENST00000397007 PTPRGP23470 1445 aa17.48■□□□□ 0.39
NUP98-205ENST00000397007 MAP3K1Q13233 1512 aa17.47■□□□□ 0.39
NUP98-205ENST00000397007 DIP2BQ9P265 1576 aa17.46■□□□□ 0.39
NUP98-205ENST00000397007 MAP3K4Q9Y6R4 1608 aa17.46■□□□□ 0.39
NUP98-205ENST00000397007 FMN1Q68DA7 1419 aa17.46■□□□□ 0.39
NUP98-205ENST00000397007 ATP10BO94823 1461 aa17.44■□□□□ 0.38
NUP98-205ENST00000397007 MAGI3Q5TCQ9 1506 aa17.43■□□□□ 0.38
NUP98-205ENST00000397007 LOC105371045A0A1W2PR82 267 aa17.41■□□□□ 0.38
NUP98-205ENST00000397007 EPRSP07814 1512 aaKnown RBP17.41■□□□□ 0.38
NUP98-205ENST00000397007 ABCA9Q8IUA7 1624 aa17.41■□□□□ 0.38
NUP98-205ENST00000397007 VPS8Q8N3P4 1428 aa17.39■□□□□ 0.37
NUP98-205ENST00000397007 CCDC18Q5T9S5 1454 aa17.37■□□□□ 0.37
NUP98-205ENST00000397007 TIAM1Q13009 1591 aa17.37■□□□□ 0.37
NUP98-205ENST00000397007 CDK13Q14004 1512 aaKnown RBP17.35■□□□□ 0.37
NUP98-205ENST00000397007 ABCC10Q5T3U5 1492 aa17.33■□□□□ 0.37
NUP98-205ENST00000397007 UBTFP17480 764 aaKnown RBP17.33■□□□□ 0.36
NUP98-205ENST00000397007 WDR7Q9Y4E6 1490 aa17.32■□□□□ 0.36
NUP98-205ENST00000397007 KIF14Q15058 1648 aa17.31■□□□□ 0.36
NUP98-205ENST00000397007 CDC42BPAQ5VT25 1732 aa17.3■□□□□ 0.36
NUP98-205ENST00000397007 TTC37Q6PGP7 1564 aa17.29■□□□□ 0.36
NUP98-205ENST00000397007 ARAP3Q8WWN8 1544 aa17.29■□□□□ 0.36
NUP98-205ENST00000397007 ASXL2Q76L83 1435 aa17.29■□□□□ 0.36
NUP98-205ENST00000397007 CDC42BPBQ9Y5S2 1711 aa17.29■□□□□ 0.36
NUP98-205ENST00000397007 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.28■□□□□ 0.36
NUP98-205ENST00000397007 PREX2Q70Z35 1606 aa17.26■□□□□ 0.35
NUP98-205ENST00000397007 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
NUP98-205ENST00000397007 EHBP1L1Q8N3D4 1523 aa17.25■□□□□ 0.35
NUP98-205ENST00000397007 MYO5CQ9NQX4 1742 aa17.25■□□□□ 0.35
NUP98-205ENST00000397007 SUPT6HQ7KZ85 1726 aaKnown RBP17.2■□□□□ 0.34
NUP98-205ENST00000397007 TROQ12816 1431 aaPredicted RBP17.19■□□□□ 0.34
NUP98-205ENST00000397007 P3H3Q8IVL6 736 aa17.19■□□□□ 0.34
NUP98-205ENST00000397007 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
NUP98-205ENST00000397007 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
NUP98-205ENST00000397007 CFAP74Q9C0B2 1584 aa17.16■□□□□ 0.34
NUP98-205ENST00000397007 FRMPD1Q5SYB0 1578 aa17.15■□□□□ 0.34
NUP98-205ENST00000397007 RICTORQ6R327 1708 aa17.14■□□□□ 0.33
NUP98-205ENST00000397007 EHMT2Q96KQ7 1210 aa17.11■□□□□ 0.33
NUP98-205ENST00000397007 SAMD9LQ8IVG5 1584 aa17.09■□□□□ 0.33
NUP98-205ENST00000397007 CROCC2H7BZ55 1655 aa17.08■□□□□ 0.32
NUP98-205ENST00000397007 TSPOAP1O95153 1857 aa17.08■□□□□ 0.32
NUP98-205ENST00000397007 GPATCH8Q9UKJ3 1502 aaKnown RBP17.06■□□□□ 0.32
NUP98-205ENST00000397007 ABCC1P33527 1531 aa17.06■□□□□ 0.32
NUP98-205ENST00000397007 PLCH2O75038 1416 aa17.05■□□□□ 0.32
NUP98-205ENST00000397007 KDM5CP41229 1560 aa17.05■□□□□ 0.32
NUP98-205ENST00000397007 NCOA2Q15596 1464 aa17.04■□□□□ 0.32
NUP98-205ENST00000397007 NEO1Q92859 1461 aa17.04■□□□□ 0.32
NUP98-205ENST00000397007 ZMYM4Q5VZL5 1548 aa17.04■□□□□ 0.32
NUP98-205ENST00000397007 TCOF1Q13428 1488 aaKnown RBP17.03■□□□□ 0.32
NUP98-205ENST00000397007 ARHGEF5Q12774 1597 aa17.01■□□□□ 0.31
NUP98-205ENST00000397007 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
NUP98-205ENST00000397007 ARHGEF12Q9NZN5 1544 aa16.99■□□□□ 0.31
NUP98-205ENST00000397007 MAST1Q9Y2H9 1570 aa16.98■□□□□ 0.31
NUP98-205ENST00000397007 INO80Q9ULG1 1556 aaPredicted RBP16.98■□□□□ 0.31
NUP98-205ENST00000397007 BCORL1Q5H9F3 1711 aa16.98■□□□□ 0.31
NUP98-205ENST00000397007 SIGLEC1Q9BZZ2 1709 aa16.97■□□□□ 0.31
NUP98-205ENST00000397007 TEX14Q8IWB6 1497 aa16.97■□□□□ 0.31
NUP98-205ENST00000397007 COL17A1Q9UMD9 1497 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms