RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 KIF13AQ9H1H9 1805 aa23.41■■□□□ 1.34
RPA3-202ENST00000396682 KIF27Q86VH2 1401 aa23.4■■□□□ 1.34
RPA3-202ENST00000396682 CUL7Q14999 1698 aa23.37■■□□□ 1.33
RPA3-202ENST00000396682 KIAA0586Q9BVV6 1533 aa23.36■■□□□ 1.33
RPA3-202ENST00000396682 ADCY10Q96PN6 1610 aa23.32■■□□□ 1.32
RPA3-202ENST00000396682 MAPKBP1O60336 1514 aa23.28■■□□□ 1.32
RPA3-202ENST00000396682 ABCC10Q5T3U5 1492 aa23.28■■□□□ 1.32
RPA3-202ENST00000396682 AEBP2Q6ZN18 517 aaPredicted RBP23.27■■□□□ 1.32
RPA3-202ENST00000396682 CARMIL1Q5VZK9 1371 aa23.25■■□□□ 1.31
RPA3-202ENST00000396682 DIP2BQ9P265 1576 aa23.23■■□□□ 1.31
RPA3-202ENST00000396682 NPM1P06748 294 aaKnown RBP eCLIP23.22■■□□□ 1.31
RPA3-202ENST00000396682 FAM69CQ0P6D2 419 aa23.22■■□□□ 1.31
RPA3-202ENST00000396682 PTPRGP23470 1445 aa23.15■■□□□ 1.3
RPA3-202ENST00000396682 IQGAP2Q13576 1575 aa23.13■■□□□ 1.29
RPA3-202ENST00000396682 TNIKQ9UKE5 1360 aa23.1■■□□□ 1.29
RPA3-202ENST00000396682 CARMIL2Q6F5E8 1435 aa23.09■■□□□ 1.29
RPA3-202ENST00000396682 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.28
RPA3-202ENST00000396682 ABCC2Q92887 1545 aa23.06■■□□□ 1.28
RPA3-202ENST00000396682 DISP1Q96F81 1524 aa23.06■■□□□ 1.28
RPA3-202ENST00000396682 TSPOAP1O95153 1857 aa23.05■■□□□ 1.28
RPA3-202ENST00000396682 RAPGEF2Q9Y4G8 1499 aa23.03■■□□□ 1.28
RPA3-202ENST00000396682 KDM6BO15054 1643 aa23.02■■□□□ 1.28
RPA3-202ENST00000396682 UHRF1BP1LA0JNW5 1464 aa23.01■■□□□ 1.27
RPA3-202ENST00000396682 UGGT2Q9NYU1 1516 aa23■■□□□ 1.27
RPA3-202ENST00000396682 ASXL2Q76L83 1435 aa22.99■■□□□ 1.27
RPA3-202ENST00000396682 UACAQ9BZF9 1416 aa22.98■■□□□ 1.27
RPA3-202ENST00000396682 PLB1Q6P1J6 1458 aa22.95■■□□□ 1.26
RPA3-202ENST00000396682 KIAA0556O60303 1618 aa22.94■■□□□ 1.26
RPA3-202ENST00000396682 GLI2P10070 1586 aa22.94■■□□□ 1.26
RPA3-202ENST00000396682 PPRC1Q5VV67 1664 aaKnown RBP22.93■■□□□ 1.26
RPA3-202ENST00000396682 KDM5BQ9UGL1 1544 aa22.92■■□□□ 1.26
RPA3-202ENST00000396682 ZCCHC11Q5TAX3 1644 aaKnown RBP22.87■■□□□ 1.25
RPA3-202ENST00000396682 CTTNBP2Q8WZ74 1663 aa22.86■■□□□ 1.25
RPA3-202ENST00000396682 EPRSP07814 1512 aaKnown RBP22.86■■□□□ 1.25
RPA3-202ENST00000396682 KDM4FA0A1W2PPD8 638 aa22.85■■□□□ 1.25
RPA3-202ENST00000396682 MAP3K4Q9Y6R4 1608 aa22.83■■□□□ 1.25
RPA3-202ENST00000396682 PRXQ9BXM0 1461 aa22.8■■□□□ 1.24
RPA3-202ENST00000396682 COL17A1Q9UMD9 1497 aaPredicted RBP22.79■■□□□ 1.24
RPA3-202ENST00000396682 GOLGA3Q08378 1498 aa22.75■■□□□ 1.23
RPA3-202ENST00000396682 WDR7Q9Y4E6 1490 aa22.75■■□□□ 1.23
RPA3-202ENST00000396682 ABCA8O94911 1581 aa22.74■■□□□ 1.23
RPA3-202ENST00000396682 TEX14Q8IWB6 1497 aa22.72■■□□□ 1.23
RPA3-202ENST00000396682 ADGRL1O94910 1474 aa22.65■■□□□ 1.22
RPA3-202ENST00000396682 CFAP43Q8NDM7 1665 aa22.62■■□□□ 1.21
RPA3-202ENST00000396682 MAGI3Q5TCQ9 1506 aa22.61■■□□□ 1.21
RPA3-202ENST00000396682 CD109Q6YHK3 1445 aa22.6■■□□□ 1.21
RPA3-202ENST00000396682 KCNH8Q96L42 1107 aa22.59■■□□□ 1.21
RPA3-202ENST00000396682 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
RPA3-202ENST00000396682 SAMD9Q5K651 1589 aa22.55■■□□□ 1.2
RPA3-202ENST00000396682 CSRNP3Q8WYN3 585 aa22.55■■□□□ 1.2
RPA3-202ENST00000396682 ATP10BO94823 1461 aa22.54■■□□□ 1.2
RPA3-202ENST00000396682 ARID3CA6NKF2 412 aa22.53■■□□□ 1.2
RPA3-202ENST00000396682 RAPGEF6Q8TEU7 1601 aa22.46■■□□□ 1.19
RPA3-202ENST00000396682 ABCA9Q8IUA7 1624 aa22.45■■□□□ 1.18
RPA3-202ENST00000396682 ARAP3Q8WWN8 1544 aa22.44■■□□□ 1.18
RPA3-202ENST00000396682 EEA1Q15075 1411 aa22.43■■□□□ 1.18
RPA3-202ENST00000396682 FAM9AQ8IZU1 332 aaPredicted RBP22.43■■□□□ 1.18
RPA3-202ENST00000396682 NUP153P49790 1475 aaKnown RBP22.41■■□□□ 1.18
RPA3-202ENST00000396682 KIF21BO75037 1637 aa22.4■■□□□ 1.18
RPA3-202ENST00000396682 FHOD3Q2V2M9 1422 aa22.38■■□□□ 1.17
RPA3-202ENST00000396682 HECW2Q9P2P5 1572 aa22.38■■□□□ 1.17
RPA3-202ENST00000396682 RANGAP1P46060 587 aaPredicted RBP22.36■■□□□ 1.17
RPA3-202ENST00000396682 PHLDB1Q86UU1 1377 aa22.34■■□□□ 1.17
RPA3-202ENST00000396682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.32■■□□□ 1.16
RPA3-202ENST00000396682 HNRNPUL2Q1KMD3 747 aaKnown RBP22.32■■□□□ 1.16
RPA3-202ENST00000396682 NEO1Q92859 1461 aa22.32■■□□□ 1.16
RPA3-202ENST00000396682 RAPGEF3O95398 923 aa22.3■■□□□ 1.16
RPA3-202ENST00000396682 FRMPD1Q5SYB0 1578 aa22.29■■□□□ 1.16
RPA3-202ENST00000396682 EFCAB5A4FU69 1503 aa22.27■■□□□ 1.16
RPA3-202ENST00000396682 ADAMTSL3P82987 1691 aa22.23■■□□□ 1.15
RPA3-202ENST00000396682 ILDR1Q86SU0 546 aaPredicted RBP22.22■■□□□ 1.15
RPA3-202ENST00000396682 PLEKHD1A6NEE1 506 aa22.21■■□□□ 1.15
RPA3-202ENST00000396682 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.21■■□□□ 1.151e-6■■■■□ 23.9
RPA3-202ENST00000396682 TTC37Q6PGP7 1564 aa22.19■■□□□ 1.14
RPA3-202ENST00000396682 RICTORQ6R327 1708 aa22.17■■□□□ 1.14
RPA3-202ENST00000396682 CDK13Q14004 1512 aaKnown RBP22.17■■□□□ 1.14
RPA3-202ENST00000396682 PTPRMP28827 1452 aa22.17■■□□□ 1.14
RPA3-202ENST00000396682 FANCAO15360 1455 aa22.16■■□□□ 1.14
RPA3-202ENST00000396682 AKNAQ7Z591 1439 aa22.16■■□□□ 1.14
RPA3-202ENST00000396682 BCORL1Q5H9F3 1711 aa22.16■■□□□ 1.14
RPA3-202ENST00000396682 ARHGEF40Q8TER5 1519 aa22.16■■□□□ 1.14
RPA3-202ENST00000396682 DENND4BO75064 1496 aaPredicted RBP22.15■■□□□ 1.14
RPA3-202ENST00000396682 CFAP74Q9C0B2 1584 aa22.14■■□□□ 1.13
RPA3-202ENST00000396682 EHMT2Q96KQ7 1210 aa22.12■■□□□ 1.13
RPA3-202ENST00000396682 MADDQ8WXG6 1647 aa22.12■■□□□ 1.13
RPA3-202ENST00000396682 ARHGAP35Q9NRY4 1499 aa22.09■■□□□ 1.13
RPA3-202ENST00000396682 ZMYM4Q5VZL5 1548 aa22.09■■□□□ 1.13
RPA3-202ENST00000396682 ARID4BQ4LE39 1312 aaPredicted RBP22.08■■□□□ 1.13
RPA3-202ENST00000396682 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.13
RPA3-202ENST00000396682 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
RPA3-202ENST00000396682 SIGLEC1Q9BZZ2 1709 aa22.06■■□□□ 1.12
RPA3-202ENST00000396682 HECW1Q76N89 1606 aa22.06■■□□□ 1.12
RPA3-202ENST00000396682 FMN1Q68DA7 1419 aa22.06■■□□□ 1.12
RPA3-202ENST00000396682 PLCH2O75038 1416 aa22.05■■□□□ 1.12
RPA3-202ENST00000396682 YEATS2Q9ULM3 1422 aa22.05■■□□□ 1.12
RPA3-202ENST00000396682 ZFYVE16Q7Z3T8 1539 aa22.03■■□□□ 1.12
RPA3-202ENST00000396682 RIMS1Q86UR5 1692 aaKnown RBP22.02■■□□□ 1.12
RPA3-202ENST00000396682 POGZQ7Z3K3 1410 aa22■■□□□ 1.11
RPA3-202ENST00000396682 SCAPERQ9BY12 1400 aa22■■□□□ 1.11
RPA3-202ENST00000396682 KIF14Q15058 1648 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms