RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 IGF1RP08069 1367 aa29.78■■■□□ 2.36
TNFSF13-205ENST00000396545 CUL7Q14999 1698 aa29.73■■■□□ 2.35
TNFSF13-205ENST00000396545 KIAA0586Q9BVV6 1533 aa29.69■■■□□ 2.34
TNFSF13-205ENST00000396545 KIF13AQ9H1H9 1805 aa29.6■■■□□ 2.33
TNFSF13-205ENST00000396545 CARMIL1Q5VZK9 1371 aa29.57■■■□□ 2.32
TNFSF13-205ENST00000396545 ADCY10Q96PN6 1610 aa29.55■■■□□ 2.32
TNFSF13-205ENST00000396545 MAPKBP1O60336 1514 aa29.53■■■□□ 2.32
TNFSF13-205ENST00000396545 ABCC10Q5T3U5 1492 aa29.49■■■□□ 2.31
TNFSF13-205ENST00000396545 NPM1P06748 294 aaKnown RBP eCLIP29.47■■■□□ 2.31
TNFSF13-205ENST00000396545 FAM69CQ0P6D2 419 aa29.42■■■□□ 2.3
TNFSF13-205ENST00000396545 DIP2BQ9P265 1576 aa29.42■■■□□ 2.3
TNFSF13-205ENST00000396545 IQGAP2Q13576 1575 aa29.4■■■□□ 2.3
TNFSF13-205ENST00000396545 PTPRGP23470 1445 aa29.39■■■□□ 2.3
TNFSF13-205ENST00000396545 AEBP2Q6ZN18 517 aaPredicted RBP29.37■■■□□ 2.29
TNFSF13-205ENST00000396545 CARMIL2Q6F5E8 1435 aa29.36■■■□□ 2.29
TNFSF13-205ENST00000396545 TNIKQ9UKE5 1360 aa29.35■■■□□ 2.29
TNFSF13-205ENST00000396545 RAPGEF2Q9Y4G8 1499 aa29.3■■■□□ 2.28
TNFSF13-205ENST00000396545 ABCC2Q92887 1545 aa29.27■■■□□ 2.28
TNFSF13-205ENST00000396545 DISP1Q96F81 1524 aa29.27■■■□□ 2.28
TNFSF13-205ENST00000396545 TTBK1Q5TCY1 1321 aaPredicted RBP29.26■■■□□ 2.27
TNFSF13-205ENST00000396545 UGGT2Q9NYU1 1516 aa29.22■■■□□ 2.27
TNFSF13-205ENST00000396545 UHRF1BP1LA0JNW5 1464 aa29.22■■■□□ 2.27
TNFSF13-205ENST00000396545 UACAQ9BZF9 1416 aa29.18■■■□□ 2.26
TNFSF13-205ENST00000396545 ASXL2Q76L83 1435 aa29.15■■■□□ 2.26
TNFSF13-205ENST00000396545 TSPOAP1O95153 1857 aa29.15■■■□□ 2.26
TNFSF13-205ENST00000396545 CHIC1Q5VXU3 224 aa29.14■■■□□ 2.26
TNFSF13-205ENST00000396545 KDM6BO15054 1643 aa29.14■■■□□ 2.26
TNFSF13-205ENST00000396545 PLB1Q6P1J6 1458 aa29.14■■■□□ 2.26
TNFSF13-205ENST00000396545 KIAA0556O60303 1618 aa29.14■■■□□ 2.25
TNFSF13-205ENST00000396545 GLI2P10070 1586 aa29.09■■■□□ 2.25
TNFSF13-205ENST00000396545 KDM5BQ9UGL1 1544 aa29.09■■■□□ 2.25
TNFSF13-205ENST00000396545 CTTNBP2Q8WZ74 1663 aa29.06■■■□□ 2.24
TNFSF13-205ENST00000396545 PRXQ9BXM0 1461 aa29.03■■■□□ 2.24
TNFSF13-205ENST00000396545 PPRC1Q5VV67 1664 aaKnown RBP29.02■■■□□ 2.24
TNFSF13-205ENST00000396545 ZCCHC11Q5TAX3 1644 aaKnown RBP29.01■■■□□ 2.23
TNFSF13-205ENST00000396545 EPRSP07814 1512 aaKnown RBP28.99■■■□□ 2.23
TNFSF13-205ENST00000396545 GOLGA3Q08378 1498 aa28.96■■■□□ 2.23
TNFSF13-205ENST00000396545 MAP3K4Q9Y6R4 1608 aa28.93■■■□□ 2.22
TNFSF13-205ENST00000396545 ABCA8O94911 1581 aa28.88■■■□□ 2.21
TNFSF13-205ENST00000396545 WDR7Q9Y4E6 1490 aa28.88■■■□□ 2.21
TNFSF13-205ENST00000396545 KDM4FA0A1W2PPD8 638 aa28.86■■■□□ 2.21
TNFSF13-205ENST00000396545 TEX14Q8IWB6 1497 aa28.84■■■□□ 2.21
TNFSF13-205ENST00000396545 COL17A1Q9UMD9 1497 aaPredicted RBP28.83■■■□□ 2.21
TNFSF13-205ENST00000396545 CSRNP3Q8WYN3 585 aa28.74■■■□□ 2.19
TNFSF13-205ENST00000396545 CFAP43Q8NDM7 1665 aa28.7■■■□□ 2.18
TNFSF13-205ENST00000396545 MAGI3Q5TCQ9 1506 aa28.69■■■□□ 2.18
TNFSF13-205ENST00000396545 CD109Q6YHK3 1445 aa28.68■■■□□ 2.18
TNFSF13-205ENST00000396545 SAMD9Q5K651 1589 aa28.68■■■□□ 2.18
TNFSF13-205ENST00000396545 KCNH8Q96L42 1107 aa28.66■■■□□ 2.18
TNFSF13-205ENST00000396545 P3H3Q8IVL6 736 aa28.65■■■□□ 2.18
TNFSF13-205ENST00000396545 EEA1Q15075 1411 aa28.65■■■□□ 2.18
TNFSF13-205ENST00000396545 ADGRL1O94910 1474 aa28.64■■■□□ 2.18
TNFSF13-205ENST00000396545 ATP10BO94823 1461 aa28.62■■■□□ 2.17
TNFSF13-205ENST00000396545 FAM9AQ8IZU1 332 aaPredicted RBP28.62■■■□□ 2.17
TNFSF13-205ENST00000396545 ARID3CA6NKF2 412 aa28.58■■■□□ 2.17
TNFSF13-205ENST00000396545 RAPGEF6Q8TEU7 1601 aa28.54■■■□□ 2.16
TNFSF13-205ENST00000396545 ABCA9Q8IUA7 1624 aa28.49■■■□□ 2.15
TNFSF13-205ENST00000396545 ARAP3Q8WWN8 1544 aa28.47■■■□□ 2.15
TNFSF13-205ENST00000396545 NUP153P49790 1475 aaKnown RBP28.47■■■□□ 2.15
TNFSF13-205ENST00000396545 FHOD3Q2V2M9 1422 aa28.46■■■□□ 2.15
TNFSF13-205ENST00000396545 KIF21BO75037 1637 aa28.44■■■□□ 2.14
TNFSF13-205ENST00000396545 RANGAP1P46060 587 aaPredicted RBP28.41■■■□□ 2.14
TNFSF13-205ENST00000396545 PHLDB1Q86UU1 1377 aa28.39■■■□□ 2.14
TNFSF13-205ENST00000396545 EFCAB5A4FU69 1503 aa28.38■■■□□ 2.13
TNFSF13-205ENST00000396545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.37■■■□□ 2.13
TNFSF13-205ENST00000396545 HNRNPUL2Q1KMD3 747 aaKnown RBP28.37■■■□□ 2.13
TNFSF13-205ENST00000396545 NEO1Q92859 1461 aa28.35■■■□□ 2.13
TNFSF13-205ENST00000396545 PLEKHD1A6NEE1 506 aa28.25■■■□□ 2.11
TNFSF13-205ENST00000396545 RAPGEF3O95398 923 aa28.25■■■□□ 2.11
TNFSF13-205ENST00000396545 FRMPD1Q5SYB0 1578 aa28.24■■■□□ 2.11
TNFSF13-205ENST00000396545 HECW2Q9P2P5 1572 aa28.24■■■□□ 2.11
TNFSF13-205ENST00000396545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.2■■■□□ 2.1
TNFSF13-205ENST00000396545 CDK13Q14004 1512 aaKnown RBP28.17■■■□□ 2.1
TNFSF13-205ENST00000396545 TTC37Q6PGP7 1564 aa28.16■■■□□ 2.1
TNFSF13-205ENST00000396545 UBTFP17480 764 aaKnown RBP28.16■■■□□ 2.1
TNFSF13-205ENST00000396545 FANCAO15360 1455 aa28.14■■■□□ 2.1
TNFSF13-205ENST00000396545 ADAMTSL3P82987 1691 aa28.14■■■□□ 2.09
TNFSF13-205ENST00000396545 CFAP74Q9C0B2 1584 aa28.13■■■□□ 2.09
TNFSF13-205ENST00000396545 AKNAQ7Z591 1439 aa28.13■■■□□ 2.09
TNFSF13-205ENST00000396545 DENND4BO75064 1496 aaPredicted RBP28.12■■■□□ 2.09
TNFSF13-205ENST00000396545 ARHGAP35Q9NRY4 1499 aa28.12■■■□□ 2.09
TNFSF13-205ENST00000396545 EHMT2Q96KQ7 1210 aa28.12■■■□□ 2.09
TNFSF13-205ENST00000396545 RICTORQ6R327 1708 aa28.12■■■□□ 2.09
TNFSF13-205ENST00000396545 FMN1Q68DA7 1419 aa28.11■■■□□ 2.09
TNFSF13-205ENST00000396545 ARHGEF40Q8TER5 1519 aa28.09■■■□□ 2.09
TNFSF13-205ENST00000396545 HECW1Q76N89 1606 aa28.07■■■□□ 2.08
TNFSF13-205ENST00000396545 PTPRMP28827 1452 aa28.07■■■□□ 2.08
TNFSF13-205ENST00000396545 BCORL1Q5H9F3 1711 aa28.06■■■□□ 2.08
TNFSF13-205ENST00000396545 ZMYM4Q5VZL5 1548 aa28.04■■■□□ 2.08
TNFSF13-205ENST00000396545 PLCH2O75038 1416 aa28.02■■■□□ 2.08
TNFSF13-205ENST00000396545 ARID4BQ4LE39 1312 aaPredicted RBP28■■■□□ 2.07
TNFSF13-205ENST00000396545 MADDQ8WXG6 1647 aa28■■■□□ 2.07
TNFSF13-205ENST00000396545 LOC105371045A0A1W2PR82 267 aa27.99■■■□□ 2.07
TNFSF13-205ENST00000396545 ATP1B4Q9UN42 357 aaPredicted RBP27.99■■■□□ 2.07
TNFSF13-205ENST00000396545 ILDR1Q86SU0 546 aaPredicted RBP27.97■■■□□ 2.07
TNFSF13-205ENST00000396545 ZFYVE16Q7Z3T8 1539 aa27.96■■■□□ 2.07
TNFSF13-205ENST00000396545 MAGI2Q86UL8 1455 aa27.95■■■□□ 2.06
TNFSF13-205ENST00000396545 CDK11AQ9UQ88 783 aaPredicted RBP27.94■■■□□ 2.06
TNFSF13-205ENST00000396545 POGZQ7Z3K3 1410 aa27.94■■■□□ 2.06
TNFSF13-205ENST00000396545 YEATS2Q9ULM3 1422 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms