RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 PRXQ9BXM0 1461 aa11.46□□□□□ -0.58
LMO3-205ENST00000396205 RAPGEF2Q9Y4G8 1499 aa11.46□□□□□ -0.58
LMO3-205ENST00000396205 ERCC6L2Q5T890 1561 aa11.45□□□□□ -0.58
LMO3-205ENST00000396205 MAPKBP1O60336 1514 aa11.45□□□□□ -0.58
LMO3-205ENST00000396205 CARMIL1Q5VZK9 1371 aa11.43□□□□□ -0.58
LMO3-205ENST00000396205 UHRF1BP1LA0JNW5 1464 aa11.43□□□□□ -0.58
LMO3-205ENST00000396205 KIF21BO75037 1637 aa11.41□□□□□ -0.58
LMO3-205ENST00000396205 KIAA0556O60303 1618 aa11.4□□□□□ -0.58
LMO3-205ENST00000396205 ADCY10Q96PN6 1610 aa11.4□□□□□ -0.58
LMO3-205ENST00000396205 PRG4Q92954 1404 aaPredicted RBP11.39□□□□□ -0.59
LMO3-205ENST00000396205 FBLN2P98095 1184 aa11.39□□□□□ -0.59
LMO3-205ENST00000396205 KIF13AQ9H1H9 1805 aa11.38□□□□□ -0.59
LMO3-205ENST00000396205 DISP1Q96F81 1524 aa11.38□□□□□ -0.59
LMO3-205ENST00000396205 SAMD9Q5K651 1589 aa11.37□□□□□ -0.59
LMO3-205ENST00000396205 GOLGA3Q08378 1498 aa11.35□□□□□ -0.59
LMO3-205ENST00000396205 CARMIL2Q6F5E8 1435 aa11.35□□□□□ -0.59
LMO3-205ENST00000396205 GLI2P10070 1586 aa11.35□□□□□ -0.59
LMO3-205ENST00000396205 JPH4Q96JJ6 628 aa11.33□□□□□ -0.6
LMO3-205ENST00000396205 ABCC2Q92887 1545 aa11.33□□□□□ -0.6
LMO3-205ENST00000396205 TNIKQ9UKE5 1360 aa11.32□□□□□ -0.6
LMO3-205ENST00000396205 DIP2BQ9P265 1576 aa11.31□□□□□ -0.6
LMO3-205ENST00000396205 ABCA8O94911 1581 aa11.3□□□□□ -0.6
LMO3-205ENST00000396205 KDM5BQ9UGL1 1544 aa11.3□□□□□ -0.6
LMO3-205ENST00000396205 EFCAB5A4FU69 1503 aa11.29□□□□□ -0.6
LMO3-205ENST00000396205 ABCC10Q5T3U5 1492 aa11.28□□□□□ -0.6
LMO3-205ENST00000396205 CYB5RLQ6IPT4 315 aa11.28□□□□□ -0.6
LMO3-205ENST00000396205 TRIM41Q8WV44 630 aa11.28□□□□□ -0.6
LMO3-205ENST00000396205 ZCCHC11Q5TAX3 1644 aaKnown RBP11.26□□□□□ -0.61
LMO3-205ENST00000396205 MAP3K4Q9Y6R4 1608 aa11.25□□□□□ -0.61
LMO3-205ENST00000396205 UACAQ9BZF9 1416 aa11.24□□□□□ -0.61
LMO3-205ENST00000396205 PLB1Q6P1J6 1458 aa11.23□□□□□ -0.61
LMO3-205ENST00000396205 PTPRGP23470 1445 aa11.23□□□□□ -0.61
LMO3-205ENST00000396205 PPRC1Q5VV67 1664 aaKnown RBP11.23□□□□□ -0.61
LMO3-205ENST00000396205 CFAP43Q8NDM7 1665 aa11.22□□□□□ -0.61
LMO3-205ENST00000396205 RAPGEF6Q8TEU7 1601 aa11.19□□□□□ -0.62
LMO3-205ENST00000396205 CSRNP3Q8WYN3 585 aa11.18□□□□□ -0.62
LMO3-205ENST00000396205 EPRSP07814 1512 aaKnown RBP11.15□□□□□ -0.63
LMO3-205ENST00000396205 ABCA9Q8IUA7 1624 aa11.14□□□□□ -0.63
LMO3-205ENST00000396205 WDR7Q9Y4E6 1490 aa11.14□□□□□ -0.63
LMO3-205ENST00000396205 ASXL2Q76L83 1435 aa11.13□□□□□ -0.63
LMO3-205ENST00000396205 MAGI3Q5TCQ9 1506 aa11.13□□□□□ -0.63
LMO3-205ENST00000396205 TEX14Q8IWB6 1497 aa11.11□□□□□ -0.63
LMO3-205ENST00000396205 CHIC1Q5VXU3 224 aa11.1□□□□□ -0.63
LMO3-205ENST00000396205 HECW1Q76N89 1606 aa11.09□□□□□ -0.63
LMO3-205ENST00000396205 CFAP74Q9C0B2 1584 aa11.09□□□□□ -0.63
LMO3-205ENST00000396205 ARAP3Q8WWN8 1544 aa11.08□□□□□ -0.64
LMO3-205ENST00000396205 NPM1P06748 294 aaKnown RBP eCLIP11.08□□□□□ -0.64
LMO3-205ENST00000396205 KDM6BO15054 1643 aa11.07□□□□□ -0.64
LMO3-205ENST00000396205 NUP153P49790 1475 aaKnown RBP11.07□□□□□ -0.64
LMO3-205ENST00000396205 PHLDB1Q86UU1 1377 aa11.06□□□□□ -0.64
LMO3-205ENST00000396205 ATP10BO94823 1461 aa11.06□□□□□ -0.64
LMO3-205ENST00000396205 FMN1Q68DA7 1419 aa11.05□□□□□ -0.64
LMO3-205ENST00000396205 ARHGAP35Q9NRY4 1499 aa11.04□□□□□ -0.64
LMO3-205ENST00000396205 LRRIQ1Q96JM4 1722 aa11.03□□□□□ -0.64
LMO3-205ENST00000396205 NEO1Q92859 1461 aa11.02□□□□□ -0.65
LMO3-205ENST00000396205 TSPOAP1O95153 1857 aa11□□□□□ -0.65
LMO3-205ENST00000396205 TRHP20396 242 aaPredicted RBP11□□□□□ -0.65
LMO3-205ENST00000396205 CCDC18Q5T9S5 1454 aa11□□□□□ -0.65
LMO3-205ENST00000396205 FAM9AQ8IZU1 332 aaPredicted RBP11□□□□□ -0.65
LMO3-205ENST00000396205 FYCO1Q9BQS8 1478 aa10.99□□□□□ -0.65
LMO3-205ENST00000396205 ZMYM4Q5VZL5 1548 aa10.98□□□□□ -0.65
LMO3-205ENST00000396205 FHOD3Q2V2M9 1422 aa10.97□□□□□ -0.65
LMO3-205ENST00000396205 CASKIN1Q8WXD9 1431 aa10.97□□□□□ -0.65
LMO3-205ENST00000396205 FAM69CQ0P6D2 419 aa10.97□□□□□ -0.65
LMO3-205ENST00000396205 MYO5CQ9NQX4 1742 aa10.97□□□□□ -0.65
LMO3-205ENST00000396205 RICTORQ6R327 1708 aa10.96□□□□□ -0.66
LMO3-205ENST00000396205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.96□□□□□ -0.66
LMO3-205ENST00000396205 FRMPD1Q5SYB0 1578 aa10.95□□□□□ -0.66
LMO3-205ENST00000396205 PCF11O94913 1555 aaKnown RBP10.95□□□□□ -0.66
LMO3-205ENST00000396205 KIF14Q15058 1648 aa10.95□□□□□ -0.66
LMO3-205ENST00000396205 TTC37Q6PGP7 1564 aa10.94□□□□□ -0.66
LMO3-205ENST00000396205 CD109Q6YHK3 1445 aa10.94□□□□□ -0.66
LMO3-205ENST00000396205 PREX2Q70Z35 1606 aa10.93□□□□□ -0.66
LMO3-205ENST00000396205 REREQ9P2R6 1566 aa10.91□□□□□ -0.66
LMO3-205ENST00000396205 MAP3K1Q13233 1512 aa10.9□□□□□ -0.66
LMO3-205ENST00000396205 ARHGEF40Q8TER5 1519 aa10.9□□□□□ -0.66
LMO3-205ENST00000396205 MAGI2Q86UL8 1455 aa10.9□□□□□ -0.67
LMO3-205ENST00000396205 TROQ12816 1431 aaPredicted RBP10.89□□□□□ -0.67
LMO3-205ENST00000396205 COL17A1Q9UMD9 1497 aaPredicted RBP10.89□□□□□ -0.67
LMO3-205ENST00000396205 KDM5CP41229 1560 aa10.89□□□□□ -0.67
LMO3-205ENST00000396205 CDK13Q14004 1512 aaKnown RBP10.88□□□□□ -0.67
LMO3-205ENST00000396205 CDC42BPBQ9Y5S2 1711 aa10.88□□□□□ -0.67
LMO3-205ENST00000396205 CDC42BPAQ5VT25 1732 aa10.87□□□□□ -0.67
LMO3-205ENST00000396205 PLCH2O75038 1416 aa10.87□□□□□ -0.67
LMO3-205ENST00000396205 ITSN2Q9NZM3 1697 aa10.86□□□□□ -0.67
LMO3-205ENST00000396205 CLIP1P30622 1438 aa10.86□□□□□ -0.67
LMO3-205ENST00000396205 EHBP1L1Q8N3D4 1523 aa10.85□□□□□ -0.67
LMO3-205ENST00000396205 ADAMTSL3P82987 1691 aa10.84□□□□□ -0.67
LMO3-205ENST00000396205 FANCAO15360 1455 aa10.83□□□□□ -0.68
LMO3-205ENST00000396205 ABCC1P33527 1531 aa10.83□□□□□ -0.68
LMO3-205ENST00000396205 BCORL1Q5H9F3 1711 aa10.82□□□□□ -0.68
LMO3-205ENST00000396205 POGZQ7Z3K3 1410 aa10.81□□□□□ -0.68
LMO3-205ENST00000396205 AKNAQ7Z591 1439 aa10.81□□□□□ -0.68
LMO3-205ENST00000396205 DENND4BO75064 1496 aaPredicted RBP10.8□□□□□ -0.68
LMO3-205ENST00000396205 PLEKHD1A6NEE1 506 aa10.8□□□□□ -0.68
LMO3-205ENST00000396205 CDK11AQ9UQ88 783 aaPredicted RBP10.8□□□□□ -0.68
LMO3-205ENST00000396205 CEP162Q5TB80 1403 aa10.8□□□□□ -0.68
LMO3-205ENST00000396205 HECW2Q9P2P5 1572 aa10.79□□□□□ -0.68
LMO3-205ENST00000396205 TIAM1Q13009 1591 aa10.79□□□□□ -0.68
LMO3-205ENST00000396205 UBTFP17480 764 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms