RNA–Protein interactions for RNA: ENST00000396200.3

PDP1-202, Transcript of pyruvate dehyrogenase phosphatase catalytic subunit 1, humanhuman

APPRIS ALT1 TSL 4 BASIC

Gene PDP1, Length 4,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDP1-202ENST00000396200 CUX1P39880 1505 aa18.86■□□□□ 0.61
PDP1-202ENST00000396200 CHIC2Q9UKJ5 165 aa18.86■□□□□ 0.61
PDP1-202ENST00000396200 TOP2BQ02880 1626 aa18.84■□□□□ 0.61
PDP1-202ENST00000396200 PLEKHD1A6NEE1 506 aa18.83■□□□□ 0.6
PDP1-202ENST00000396200 GAPVD1Q14C86 1478 aa18.82■□□□□ 0.6
PDP1-202ENST00000396200 MIER1Q8N108 512 aa18.8■□□□□ 0.6
PDP1-202ENST00000396200 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
PDP1-202ENST00000396200 POLR3GLQ9BT43 218 aa18.78■□□□□ 0.6
PDP1-202ENST00000396200 KANK4Q5T7N3 995 aaPredicted RBP18.77■□□□□ 0.6
PDP1-202ENST00000396200 KCNH8Q96L42 1107 aa18.77■□□□□ 0.59
PDP1-202ENST00000396200 LAMC3Q9Y6N6 1575 aa18.74■□□□□ 0.59
PDP1-202ENST00000396200 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.59
PDP1-202ENST00000396200 FHOD3Q2V2M9 1422 aa18.74■□□□□ 0.59
PDP1-202ENST00000396200 POLA1P09884 1462 aaPredicted RBP18.73■□□□□ 0.59
PDP1-202ENST00000396200 MRC2Q9UBG0 1479 aa18.72■□□□□ 0.59
PDP1-202ENST00000396200 FMN1Q68DA7 1419 aa18.72■□□□□ 0.59
PDP1-202ENST00000396200 TSPY4P0CV99 314 aa18.71■□□□□ 0.59
PDP1-202ENST00000396200 TSPY10P0CW01 314 aa18.71■□□□□ 0.59
PDP1-202ENST00000396200 CARMIL2Q6F5E8 1435 aa18.7■□□□□ 0.58
PDP1-202ENST00000396200 DNMBPQ6XZF7 1577 aa18.7■□□□□ 0.58
PDP1-202ENST00000396200 ZNF326Q5BKZ1 582 aaKnown RBP18.68■□□□□ 0.58
PDP1-202ENST00000396200 RRP7BPQ9NSQ0 103 aa18.68■□□□□ 0.58
PDP1-202ENST00000396200 CFDP1Q9UEE9 299 aaPredicted RBP18.68■□□□□ 0.58
PDP1-202ENST00000396200 KIF21BO75037 1637 aa18.66■□□□□ 0.58
PDP1-202ENST00000396200 JPH4Q96JJ6 628 aa18.66■□□□□ 0.58
PDP1-202ENST00000396200 CCNB3Q8WWL7 1395 aa18.66■□□□□ 0.58
PDP1-202ENST00000396200 PRXQ9BXM0 1461 aa18.62■□□□□ 0.57
PDP1-202ENST00000396200 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
PDP1-202ENST00000396200 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
PDP1-202ENST00000396200 CNGB1Q14028 1251 aaPredicted RBP18.59■□□□□ 0.57
PDP1-202ENST00000396200 IFT140Q96RY7 1462 aa18.57■□□□□ 0.56
PDP1-202ENST00000396200 TONSLQ96HA7 1378 aa18.57■□□□□ 0.56
PDP1-202ENST00000396200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
PDP1-202ENST00000396200 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
PDP1-202ENST00000396200 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
PDP1-202ENST00000396200 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
PDP1-202ENST00000396200 BIVM-ERCC5R4GMW8 1640 aa18.52■□□□□ 0.56
PDP1-202ENST00000396200 BCL11AQ9H165 835 aa18.49■□□□□ 0.55
PDP1-202ENST00000396200 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
PDP1-202ENST00000396200 ARAP1Q96P48 1450 aa18.46■□□□□ 0.54
PDP1-202ENST00000396200 PTPRGP23470 1445 aa18.41■□□□□ 0.54
PDP1-202ENST00000396200 SNAPC4Q5SXM2 1469 aa18.41■□□□□ 0.54
PDP1-202ENST00000396200 NEFLP07196 543 aa18.4■□□□□ 0.54
PDP1-202ENST00000396200 CLSPNQ9HAW4 1339 aa18.39■□□□□ 0.54
PDP1-202ENST00000396200 CCDC18Q5T9S5 1454 aa18.37■□□□□ 0.53
PDP1-202ENST00000396200 SETD5Q9C0A6 1442 aa18.36■□□□□ 0.53
PDP1-202ENST00000396200 CHGAP10645 457 aaKnown RBP18.36■□□□□ 0.53
PDP1-202ENST00000396200 ESF1Q9H501 851 aaKnown RBP18.36■□□□□ 0.53
PDP1-202ENST00000396200 OSCARQ8IYS5 282 aa18.36■□□□□ 0.53
PDP1-202ENST00000396200 BCANQ96GW7 911 aa18.36■□□□□ 0.53
PDP1-202ENST00000396200 SIN3AQ96ST3 1273 aa18.34■□□□□ 0.53
PDP1-202ENST00000396200 ANP32CO43423 234 aa18.33■□□□□ 0.52
PDP1-202ENST00000396200 ZNF608Q9ULD9 1512 aaPredicted RBP18.32■□□□□ 0.52
PDP1-202ENST00000396200 CASKIN1Q8WXD9 1431 aa18.32■□□□□ 0.52
PDP1-202ENST00000396200 KDM2AQ9Y2K7 1162 aa18.31■□□□□ 0.52
PDP1-202ENST00000396200 RAB3GAP2Q9H2M9 1393 aa18.31■□□□□ 0.52
PDP1-202ENST00000396200 CUL7Q14999 1698 aa18.3■□□□□ 0.52
PDP1-202ENST00000396200 SUPT16HQ9Y5B9 1047 aaKnown RBP18.3■□□□□ 0.52
PDP1-202ENST00000396200 EFCAB5A4FU69 1503 aa18.3■□□□□ 0.52
PDP1-202ENST00000396200 ANP32EQ9BTT0 268 aa18.29■□□□□ 0.52
PDP1-202ENST00000396200 LRRC9Q6ZRR7 1453 aa18.27■□□□□ 0.52
PDP1-202ENST00000396200 EFCAB2Q5VUJ9 269 aa18.27■□□□□ 0.51
PDP1-202ENST00000396200 PRDM2Q13029 1718 aa18.26■□□□□ 0.51
PDP1-202ENST00000396200 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
PDP1-202ENST00000396200 FYCO1Q9BQS8 1478 aa18.24■□□□□ 0.51
PDP1-202ENST00000396200 PRG4Q92954 1404 aaPredicted RBP18.24■□□□□ 0.51
PDP1-202ENST00000396200 DDX10Q13206 875 aaKnown RBP18.24■□□□□ 0.51
PDP1-202ENST00000396200 STAG3Q9UJ98 1225 aa18.24■□□□□ 0.51
PDP1-202ENST00000396200 KIF21AQ7Z4S6 1674 aa18.24■□□□□ 0.51
PDP1-202ENST00000396200 HNRNPMP52272 730 aaKnown RBP eCLIP18.23■□□□□ 0.51
PDP1-202ENST00000396200 KIAA0586Q9BVV6 1533 aa18.23■□□□□ 0.51
PDP1-202ENST00000396200 PHLDB1Q86UU1 1377 aa18.23■□□□□ 0.51
PDP1-202ENST00000396200 RGL3Q3MIN7 710 aa18.21■□□□□ 0.51
PDP1-202ENST00000396200 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
PDP1-202ENST00000396200 SYNJ2O15056 1496 aa18.21■□□□□ 0.5
PDP1-202ENST00000396200 MAGI1Q96QZ7 1491 aaPredicted RBP18.19■□□□□ 0.5
PDP1-202ENST00000396200 DHX57Q6P158 1386 aaKnown RBP18.19■□□□□ 0.5
PDP1-202ENST00000396200 FKBP8Q14318 412 aa18.19■□□□□ 0.5
PDP1-202ENST00000396200 IQGAP2Q13576 1575 aa18.19■□□□□ 0.5
PDP1-202ENST00000396200 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
PDP1-202ENST00000396200 ANKRD30AQ9BXX3 1397 aa18.18■□□□□ 0.5
PDP1-202ENST00000396200 CYB5RLQ6IPT4 315 aa18.17■□□□□ 0.5
PDP1-202ENST00000396200 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
PDP1-202ENST00000396200 FOXD1Q16676 465 aa18.16■□□□□ 0.5
PDP1-202ENST00000396200 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
PDP1-202ENST00000396200 EIF4G2P78344 907 aaKnown RBP eCLIP18.15■□□□□ 0.5
PDP1-202ENST00000396200 NCOA2Q15596 1464 aa18.14■□□□□ 0.49
PDP1-202ENST00000396200 MPHOSPH9Q99550 1183 aa18.13■□□□□ 0.49
PDP1-202ENST00000396200 RSPH4AQ5TD94 716 aa18.13■□□□□ 0.49
PDP1-202ENST00000396200 ZNF644Q9H582 1327 aaPredicted RBP18.12■□□□□ 0.49
PDP1-202ENST00000396200 PKD2Q13563 968 aa18.12■□□□□ 0.49
PDP1-202ENST00000396200 TIAM1Q13009 1591 aa18.11■□□□□ 0.49
PDP1-202ENST00000396200 ERICH6Q7L0X2 663 aa18.1■□□□□ 0.49
PDP1-202ENST00000396200 NUP155O75694 1391 aa18.09■□□□□ 0.49
PDP1-202ENST00000396200 TIMELESSQ9UNS1 1208 aa18.09■□□□□ 0.49
PDP1-202ENST00000396200 ARID4BQ4LE39 1312 aaPredicted RBP18.08■□□□□ 0.48
PDP1-202ENST00000396200 SPAG9O60271 1321 aaKnown RBP18.07■□□□□ 0.48
PDP1-202ENST00000396200 PCF11O94913 1555 aaKnown RBP18.06■□□□□ 0.48
PDP1-202ENST00000396200 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
PDP1-202ENST00000396200 RRBP1Q9P2E9 1410 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms