RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 ABCC8Q09428 1581 aa17.86■□□□□ 0.45
CAST-206ENST00000395812 TONSLQ96HA7 1378 aa17.85■□□□□ 0.45
CAST-206ENST00000395812 HAP1P54257 671 aaPredicted RBP17.84■□□□□ 0.45
CAST-206ENST00000395812 ACIN1Q9UKV3 1341 aaKnown RBP17.84■□□□□ 0.45
CAST-206ENST00000395812 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
CAST-206ENST00000395812 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.45
CAST-206ENST00000395812 CCNB3Q8WWL7 1395 aa17.82■□□□□ 0.44
CAST-206ENST00000395812 EFCAB2Q5VUJ9 269 aa17.81■□□□□ 0.44
CAST-206ENST00000395812 KDM2AQ9Y2K7 1162 aa17.81■□□□□ 0.44
CAST-206ENST00000395812 NCAPD3P42695 1498 aa17.8■□□□□ 0.44
CAST-206ENST00000395812 HDGFP51858 240 aaKnown RBP17.8■□□□□ 0.44
CAST-206ENST00000395812 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
CAST-206ENST00000395812 HRCP23327 699 aa17.79■□□□□ 0.44
CAST-206ENST00000395812 FHAD1B1AJZ9 1412 aa17.79■□□□□ 0.44
CAST-206ENST00000395812 SMARCA4P51532 1647 aa17.78■□□□□ 0.44
CAST-206ENST00000395812 A0A0G2JS52 829 aa17.75■□□□□ 0.43
CAST-206ENST00000395812 GGT6Q6P531 493 aa17.75■□□□□ 0.43
CAST-206ENST00000395812 PLEKHG5O94827 1062 aa17.74■□□□□ 0.43
CAST-206ENST00000395812 DNAJC5BQ9UF47 199 aa17.74■□□□□ 0.43
CAST-206ENST00000395812 ANP32CO43423 234 aa17.73■□□□□ 0.43
CAST-206ENST00000395812 TNIKQ9UKE5 1360 aa17.71■□□□□ 0.43
CAST-206ENST00000395812 RGL3Q3MIN7 710 aa17.71■□□□□ 0.43
CAST-206ENST00000395812 KANK1Q14678 1352 aa17.7■□□□□ 0.42
CAST-206ENST00000395812 CEP162Q5TB80 1403 aa17.7■□□□□ 0.42
CAST-206ENST00000395812 ZBTB47Q9UFB7 747 aaPredicted RBP17.68■□□□□ 0.42
CAST-206ENST00000395812 WIZO95785 1651 aa17.68■□□□□ 0.42
CAST-206ENST00000395812 ERICH6Q7L0X2 663 aa17.67■□□□□ 0.42
CAST-206ENST00000395812 ZBTB7CA1YPR0 619 aa17.66■□□□□ 0.42
CAST-206ENST00000395812 NPM2Q86SE8 214 aaKnown RBP17.66■□□□□ 0.42
CAST-206ENST00000395812 PTPRGP23470 1445 aa17.66■□□□□ 0.42
CAST-206ENST00000395812 LMOD2Q6P5Q4 547 aa17.63■□□□□ 0.41
CAST-206ENST00000395812 FAM69CQ0P6D2 419 aa17.62■□□□□ 0.41
CAST-206ENST00000395812 POGKQ9P215 609 aa17.6■□□□□ 0.41
CAST-206ENST00000395812 CC2D2AQ9P2K1 1620 aa17.6■□□□□ 0.41
CAST-206ENST00000395812 FMN1Q68DA7 1419 aa17.59■□□□□ 0.41
CAST-206ENST00000395812 CLSPNQ9HAW4 1339 aa17.59■□□□□ 0.41
CAST-206ENST00000395812 TMC1Q8TDI8 760 aa17.55■□□□□ 0.4
CAST-206ENST00000395812 RAPGEF2Q9Y4G8 1499 aa17.55■□□□□ 0.4
CAST-206ENST00000395812 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
CAST-206ENST00000395812 DAXXQ9UER7 740 aaPredicted RBP17.54■□□□□ 0.4
CAST-206ENST00000395812 GAPVD1Q14C86 1478 aa17.54■□□□□ 0.4
CAST-206ENST00000395812 MYT1Q01538 1121 aa17.53■□□□□ 0.4
CAST-206ENST00000395812 DIEXFQ68CQ4 756 aaKnown RBP17.52■□□□□ 0.4
CAST-206ENST00000395812 SPAG9O60271 1321 aaKnown RBP17.52■□□□□ 0.39
CAST-206ENST00000395812 RSPH4AQ5TD94 716 aa17.51■□□□□ 0.39
CAST-206ENST00000395812 KIF3BO15066 747 aa17.5■□□□□ 0.39
CAST-206ENST00000395812 EID1Q9Y6B2 187 aa17.49■□□□□ 0.39
CAST-206ENST00000395812 MRC2Q9UBG0 1479 aa17.49■□□□□ 0.39
CAST-206ENST00000395812 CDCA8Q53HL2 280 aa17.48■□□□□ 0.39
CAST-206ENST00000395812 AQRO60306 1485 aaKnown RBP eCLIP17.48■□□□□ 0.392e-6■■■■□ 24.4
CAST-206ENST00000395812 FGD5Q6ZNL6 1462 aa17.46■□□□□ 0.39
CAST-206ENST00000395812 WASHC2CQ9Y4E1 1318 aa17.45■□□□□ 0.38
CAST-206ENST00000395812 NESP48681 1621 aa17.45■□□□□ 0.38
CAST-206ENST00000395812 RAD54L2Q9Y4B4 1467 aa17.43■□□□□ 0.38
CAST-206ENST00000395812 BCL11AQ9H165 835 aa17.42■□□□□ 0.38
CAST-206ENST00000395812 HNRNPMP52272 730 aaKnown RBP eCLIP17.4■□□□□ 0.38
CAST-206ENST00000395812 GRIN2BQ13224 1484 aa17.4■□□□□ 0.38
CAST-206ENST00000395812 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
CAST-206ENST00000395812 EIF4G2P78344 907 aaKnown RBP eCLIP17.39■□□□□ 0.37
CAST-206ENST00000395812 IFT140Q96RY7 1462 aa17.38■□□□□ 0.37
CAST-206ENST00000395812 FHOD3Q2V2M9 1422 aa17.37■□□□□ 0.37
CAST-206ENST00000395812 CFTRP13569 1480 aa17.36■□□□□ 0.37
CAST-206ENST00000395812 WDR43Q15061 677 aaKnown RBP eCLIP17.36■□□□□ 0.37
CAST-206ENST00000395812 CARD11Q9BXL7 1154 aa17.35■□□□□ 0.37
CAST-206ENST00000395812 ANKRD30AQ9BXX3 1397 aa17.35■□□□□ 0.37
CAST-206ENST00000395812 CCDC18Q5T9S5 1454 aa17.35■□□□□ 0.37
CAST-206ENST00000395812 HMGXB3Q12766 1538 aa17.34■□□□□ 0.37
CAST-206ENST00000395812 PPM1GO15355 546 aaPredicted RBP17.33■□□□□ 0.36
CAST-206ENST00000395812 ARHGAP35Q9NRY4 1499 aa17.32■□□□□ 0.36
CAST-206ENST00000395812 IGF1RP08069 1367 aa17.31■□□□□ 0.36
CAST-206ENST00000395812 CFAP53Q96M91 514 aa17.3■□□□□ 0.36
CAST-206ENST00000395812 DCAF11Q8TEB1 546 aa17.29■□□□□ 0.36
CAST-206ENST00000395812 STK26Q9P289 416 aa17.29■□□□□ 0.36
CAST-206ENST00000395812 VPS8Q8N3P4 1428 aa17.28■□□□□ 0.36
CAST-206ENST00000395812 SRPK2P78362 688 aaKnown RBP17.28■□□□□ 0.36
CAST-206ENST00000395812 PKD2Q13563 968 aa17.28■□□□□ 0.36
CAST-206ENST00000395812 NUP155O75694 1391 aa17.28■□□□□ 0.36
CAST-206ENST00000395812 KNSTRNQ9Y448 316 aa17.28■□□□□ 0.36
CAST-206ENST00000395812 SAFB2Q14151 953 aaKnown RBP eCLIP17.27■□□□□ 0.35
CAST-206ENST00000395812 DDX10Q13206 875 aaKnown RBP17.26■□□□□ 0.35
CAST-206ENST00000395812 ARXQ96QS3 562 aa17.26■□□□□ 0.35
CAST-206ENST00000395812 PRG4Q92954 1404 aaPredicted RBP17.25■□□□□ 0.35
CAST-206ENST00000395812 CCDC9Q9Y3X0 531 aaKnown RBP17.21■□□□□ 0.35
CAST-206ENST00000395812 PAK3O75914 559 aaPredicted RBP17.2■□□□□ 0.34
CAST-206ENST00000395812 KANK4Q5T7N3 995 aaPredicted RBP17.2■□□□□ 0.34
CAST-206ENST00000395812 SALL2Q9Y467 1007 aaPredicted RBP17.2■□□□□ 0.34
CAST-206ENST00000395812 NPHP1O15259 732 aa17.19■□□□□ 0.34
CAST-206ENST00000395812 SOX12O15370 315 aa17.19■□□□□ 0.34
CAST-206ENST00000395812 NUDCQ9Y266 331 aa17.18■□□□□ 0.34
CAST-206ENST00000395812 TOPBP1Q92547 1522 aa17.18■□□□□ 0.34
CAST-206ENST00000395812 BICRAQ9NZM4 1560 aa17.18■□□□□ 0.34
CAST-206ENST00000395812 FAM9BQ8IZU0 186 aa17.18■□□□□ 0.34
CAST-206ENST00000395812 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
CAST-206ENST00000395812 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
CAST-206ENST00000395812 TMF1P82094 1093 aa17.14■□□□□ 0.33
CAST-206ENST00000395812 HIRIP3Q9BW71 556 aaPredicted RBP17.14■□□□□ 0.33
CAST-206ENST00000395812 HDGFL2Q7Z4V5 671 aaPredicted RBP17.13■□□□□ 0.33
CAST-206ENST00000395812 MRS2Q9HD23 443 aa17.12■□□□□ 0.33
CAST-206ENST00000395812 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
CAST-206ENST00000395812 NGDNQ8NEJ9 315 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms