RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
CXCL12-206ENST00000395795 CUL7Q14999 1698 aa28.16■■■□□ 2.1
CXCL12-206ENST00000395795 KIAA0586Q9BVV6 1533 aa28.1■■■□□ 2.09
CXCL12-206ENST00000395795 CARMIL1Q5VZK9 1371 aa28.09■■■□□ 2.09
CXCL12-206ENST00000395795 ADCY10Q96PN6 1610 aa27.87■■■□□ 2.05
CXCL12-206ENST00000395795 RAPGEF2Q9Y4G8 1499 aa27.84■■■□□ 2.05
CXCL12-206ENST00000395795 IQGAP2Q13576 1575 aa27.82■■■□□ 2.04
CXCL12-206ENST00000395795 KIF13AQ9H1H9 1805 aa27.78■■■□□ 2.04
CXCL12-206ENST00000395795 DISP1Q96F81 1524 aa27.77■■■□□ 2.04
CXCL12-206ENST00000395795 MAPKBP1O60336 1514 aa27.77■■■□□ 2.04
CXCL12-206ENST00000395795 PTPRGP23470 1445 aa27.75■■■□□ 2.03
CXCL12-206ENST00000395795 TNIKQ9UKE5 1360 aa27.73■■■□□ 2.03
CXCL12-206ENST00000395795 UGGT2Q9NYU1 1516 aa27.72■■■□□ 2.03
CXCL12-206ENST00000395795 ABCC10Q5T3U5 1492 aa27.72■■■□□ 2.03
CXCL12-206ENST00000395795 PRXQ9BXM0 1461 aa27.71■■■□□ 2.03
CXCL12-206ENST00000395795 CARMIL2Q6F5E8 1435 aa27.71■■■□□ 2.03
CXCL12-206ENST00000395795 DIP2BQ9P265 1576 aa27.65■■■□□ 2.02
CXCL12-206ENST00000395795 NPM1P06748 294 aaKnown RBP eCLIP27.64■■■□□ 2.02
CXCL12-206ENST00000395795 FAM69CQ0P6D2 419 aa27.61■■■□□ 2.01
CXCL12-206ENST00000395795 UHRF1BP1LA0JNW5 1464 aa27.61■■■□□ 2.01
CXCL12-206ENST00000395795 ABCC2Q92887 1545 aa27.61■■■□□ 2.01
CXCL12-206ENST00000395795 KIAA0556O60303 1618 aa27.6■■■□□ 2.01
CXCL12-206ENST00000395795 TTBK1Q5TCY1 1321 aaPredicted RBP27.6■■■□□ 2.01
CXCL12-206ENST00000395795 UACAQ9BZF9 1416 aa27.58■■■□□ 2
CXCL12-206ENST00000395795 CTTNBP2Q8WZ74 1663 aa27.56■■■□□ 2
CXCL12-206ENST00000395795 KDM5BQ9UGL1 1544 aa27.5■■□□□ 1.99
CXCL12-206ENST00000395795 ASXL2Q76L83 1435 aa27.49■■□□□ 1.99
CXCL12-206ENST00000395795 CSRNP3Q8WYN3 585 aa27.46■■□□□ 1.99
CXCL12-206ENST00000395795 PLB1Q6P1J6 1458 aa27.43■■□□□ 1.98
CXCL12-206ENST00000395795 GOLGA3Q08378 1498 aa27.41■■□□□ 1.98
CXCL12-206ENST00000395795 GLI2P10070 1586 aa27.4■■□□□ 1.98
CXCL12-206ENST00000395795 ZCCHC11Q5TAX3 1644 aaKnown RBP27.38■■□□□ 1.97
CXCL12-206ENST00000395795 ABCA8O94911 1581 aa27.38■■□□□ 1.97
CXCL12-206ENST00000395795 EEA1Q15075 1411 aa27.36■■□□□ 1.97
CXCL12-206ENST00000395795 PPRC1Q5VV67 1664 aaKnown RBP27.35■■□□□ 1.97
CXCL12-206ENST00000395795 TSPOAP1O95153 1857 aa27.34■■□□□ 1.97
CXCL12-206ENST00000395795 EPRSP07814 1512 aaKnown RBP27.34■■□□□ 1.97
CXCL12-206ENST00000395795 SAMD9Q5K651 1589 aa27.28■■□□□ 1.96
CXCL12-206ENST00000395795 KDM6BO15054 1643 aa27.27■■□□□ 1.96
CXCL12-206ENST00000395795 MAP3K4Q9Y6R4 1608 aa27.25■■□□□ 1.95
CXCL12-206ENST00000395795 WDR7Q9Y4E6 1490 aa27.25■■□□□ 1.95
CXCL12-206ENST00000395795 CHIC1Q5VXU3 224 aa27.24■■□□□ 1.95
CXCL12-206ENST00000395795 P3H3Q8IVL6 736 aa27.22■■□□□ 1.95
CXCL12-206ENST00000395795 FAM9AQ8IZU1 332 aaPredicted RBP27.21■■□□□ 1.95
CXCL12-206ENST00000395795 COL17A1Q9UMD9 1497 aaPredicted RBP27.19■■□□□ 1.94
CXCL12-206ENST00000395795 KIF21BO75037 1637 aa27.18■■□□□ 1.94
CXCL12-206ENST00000395795 ATP10BO94823 1461 aa27.15■■□□□ 1.94
CXCL12-206ENST00000395795 AEBP2Q6ZN18 517 aaPredicted RBP27.09■■□□□ 1.93
CXCL12-206ENST00000395795 FHOD3Q2V2M9 1422 aa27.07■■□□□ 1.92
CXCL12-206ENST00000395795 TEX14Q8IWB6 1497 aa27.06■■□□□ 1.92
CXCL12-206ENST00000395795 MAGI3Q5TCQ9 1506 aa27.06■■□□□ 1.92
CXCL12-206ENST00000395795 RAPGEF6Q8TEU7 1601 aa27.05■■□□□ 1.92
CXCL12-206ENST00000395795 ARID3CA6NKF2 412 aa27.05■■□□□ 1.92
CXCL12-206ENST00000395795 KCNH8Q96L42 1107 aa27.04■■□□□ 1.92
CXCL12-206ENST00000395795 NUP153P49790 1475 aaKnown RBP27.04■■□□□ 1.92
CXCL12-206ENST00000395795 CD109Q6YHK3 1445 aa27.03■■□□□ 1.92
CXCL12-206ENST00000395795 CFAP43Q8NDM7 1665 aa27.03■■□□□ 1.92
CXCL12-206ENST00000395795 KDM4FA0A1W2PPD8 638 aa27.01■■□□□ 1.91
CXCL12-206ENST00000395795 RANGAP1P46060 587 aaPredicted RBP27.01■■□□□ 1.91
CXCL12-206ENST00000395795 EFCAB5A4FU69 1503 aa26.98■■□□□ 1.91
CXCL12-206ENST00000395795 ABCA9Q8IUA7 1624 aa26.93■■□□□ 1.9
CXCL12-206ENST00000395795 EHMT2Q96KQ7 1210 aa26.88■■□□□ 1.89
CXCL12-206ENST00000395795 ARHGAP35Q9NRY4 1499 aa26.87■■□□□ 1.89
CXCL12-206ENST00000395795 UBTFP17480 764 aaKnown RBP26.84■■□□□ 1.89
CXCL12-206ENST00000395795 ARAP3Q8WWN8 1544 aa26.84■■□□□ 1.89
CXCL12-206ENST00000395795 ADGRL1O94910 1474 aa26.79■■□□□ 1.88
CXCL12-206ENST00000395795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.78■■□□□ 1.88
CXCL12-206ENST00000395795 HNRNPUL2Q1KMD3 747 aaKnown RBP26.78■■□□□ 1.88
CXCL12-206ENST00000395795 CDK13Q14004 1512 aaKnown RBP26.77■■□□□ 1.88
CXCL12-206ENST00000395795 NEO1Q92859 1461 aa26.74■■□□□ 1.87
CXCL12-206ENST00000395795 PHLDB1Q86UU1 1377 aa26.73■■□□□ 1.87
CXCL12-206ENST00000395795 PLEKHD1A6NEE1 506 aa26.73■■□□□ 1.87
CXCL12-206ENST00000395795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.72■■□□□ 1.87
CXCL12-206ENST00000395795 FMN1Q68DA7 1419 aa26.71■■□□□ 1.87
CXCL12-206ENST00000395795 FRMPD1Q5SYB0 1578 aa26.69■■□□□ 1.86
CXCL12-206ENST00000395795 TTC37Q6PGP7 1564 aa26.68■■□□□ 1.86
CXCL12-206ENST00000395795 RAPGEF3O95398 923 aa26.66■■□□□ 1.86
CXCL12-206ENST00000395795 HECW1Q76N89 1606 aa26.65■■□□□ 1.86
CXCL12-206ENST00000395795 LRRIQ1Q96JM4 1722 aa26.6■■□□□ 1.85
CXCL12-206ENST00000395795 AKNAQ7Z591 1439 aa26.58■■□□□ 1.85
CXCL12-206ENST00000395795 FANCAO15360 1455 aa26.58■■□□□ 1.85
CXCL12-206ENST00000395795 RICTORQ6R327 1708 aa26.54■■□□□ 1.84
CXCL12-206ENST00000395795 PLCH2O75038 1416 aa26.54■■□□□ 1.84
CXCL12-206ENST00000395795 ATP1B4Q9UN42 357 aaPredicted RBP26.53■■□□□ 1.84
CXCL12-206ENST00000395795 KIF14Q15058 1648 aa26.53■■□□□ 1.84
CXCL12-206ENST00000395795 DENND4BO75064 1496 aaPredicted RBP26.52■■□□□ 1.84
CXCL12-206ENST00000395795 CASKIN1Q8WXD9 1431 aa26.52■■□□□ 1.84
CXCL12-206ENST00000395795 PCF11O94913 1555 aaKnown RBP26.51■■□□□ 1.83
CXCL12-206ENST00000395795 TROQ12816 1431 aaPredicted RBP26.51■■□□□ 1.83
CXCL12-206ENST00000395795 CFAP74Q9C0B2 1584 aa26.5■■□□□ 1.83
CXCL12-206ENST00000395795 ZMYM4Q5VZL5 1548 aa26.46■■□□□ 1.83
CXCL12-206ENST00000395795 ARHGEF40Q8TER5 1519 aa26.45■■□□□ 1.83
CXCL12-206ENST00000395795 CLIP1P30622 1438 aa26.45■■□□□ 1.82
CXCL12-206ENST00000395795 ADAMTSL3P82987 1691 aa26.44■■□□□ 1.82
CXCL12-206ENST00000395795 CDK11AQ9UQ88 783 aaPredicted RBP26.44■■□□□ 1.82
CXCL12-206ENST00000395795 SCAPERQ9BY12 1400 aa26.41■■□□□ 1.82
CXCL12-206ENST00000395795 POGZQ7Z3K3 1410 aa26.4■■□□□ 1.82
CXCL12-206ENST00000395795 YEATS2Q9ULM3 1422 aa26.4■■□□□ 1.82
CXCL12-206ENST00000395795 MYO5CQ9NQX4 1742 aa26.4■■□□□ 1.82
CXCL12-206ENST00000395795 CCDC18Q5T9S5 1454 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms